RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 NECTIN2Q92692 538 aa18.64■□□□□ 0.57
NXF1-204ENST00000527064 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
NXF1-204ENST00000527064 SALL2Q9Y467 1007 aaPredicted RBP18.64■□□□□ 0.57
NXF1-204ENST00000527064 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
NXF1-204ENST00000527064 NPHP1O15259 732 aa18.63■□□□□ 0.57
NXF1-204ENST00000527064 PDIA6Q15084 440 aa18.63■□□□□ 0.57
NXF1-204ENST00000527064 DBF4Q9UBU7 674 aaPredicted RBP18.63■□□□□ 0.57
NXF1-204ENST00000527064 PROSER3Q2NL68 480 aa18.62■□□□□ 0.57
NXF1-204ENST00000527064 TTLL7Q6ZT98 887 aa18.62■□□□□ 0.57
NXF1-204ENST00000527064 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
NXF1-204ENST00000527064 TSR2Q969E8 191 aaKnown RBP18.62■□□□□ 0.57
NXF1-204ENST00000527064 CHPF2Q9P2E5 772 aa18.62■□□□□ 0.57
NXF1-204ENST00000527064 NIP7Q9Y221 180 aaKnown RBP eCLIP18.62■□□□□ 0.57
NXF1-204ENST00000527064 ATP10DQ9P241 1426 aa18.62■□□□□ 0.57
NXF1-204ENST00000527064 GRIN3BO60391 1043 aa18.61■□□□□ 0.57
NXF1-204ENST00000527064 ST5P78524 1137 aa18.61■□□□□ 0.57
NXF1-204ENST00000527064 LRP10Q7Z4F1 713 aa18.61■□□□□ 0.57
NXF1-204ENST00000527064 N4BP2Q86UW6 1770 aaPredicted RBP18.6■□□□□ 0.57
NXF1-204ENST00000527064 ANXA1P04083 346 aa18.6■□□□□ 0.57
NXF1-204ENST00000527064 HLFQ16534 295 aa18.6■□□□□ 0.57
NXF1-204ENST00000527064 NBPF5PQ86XG9 351 aaPredicted RBP18.6■□□□□ 0.57
NXF1-204ENST00000527064 ZBTB3Q9H5J0 574 aa18.6■□□□□ 0.57
NXF1-204ENST00000527064 HYPKQ9NX55 129 aa18.6■□□□□ 0.57
NXF1-204ENST00000527064 FANCIQ9NVI1 1328 aa18.59■□□□□ 0.57
NXF1-204ENST00000527064 A0A0G2JLW4 131 aa18.59■□□□□ 0.57
NXF1-204ENST00000527064 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
NXF1-204ENST00000527064 DPEP1P16444 411 aa18.59■□□□□ 0.57
NXF1-204ENST00000527064 PRR5LQ6MZQ0 368 aa18.59■□□□□ 0.57
NXF1-204ENST00000527064 C8orf58Q8NAV2 365 aa18.59■□□□□ 0.57
NXF1-204ENST00000527064 XAGE3Q8WTP9 111 aa18.59■□□□□ 0.57
NXF1-204ENST00000527064 MYH16Q9H6N6 1097 aa18.59■□□□□ 0.57
NXF1-204ENST00000527064 PDZRN3Q9UPQ7 1066 aa18.59■□□□□ 0.57
NXF1-204ENST00000527064 NUP98P52948 1817 aa18.58■□□□□ 0.57
NXF1-204ENST00000527064 GOLGB1Q14789 3259 aaKnown RBP18.58■□□□□ 0.57
NXF1-204ENST00000527064 YBX3P16989 372 aaKnown RBP eCLIP18.58■□□□□ 0.56
NXF1-204ENST00000527064 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.56
NXF1-204ENST00000527064 GIGYF2Q6Y7W6 1299 aaKnown RBP18.58■□□□□ 0.56
NXF1-204ENST00000527064 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
NXF1-204ENST00000527064 IBTKQ9P2D0 1353 aaPredicted RBP18.57■□□□□ 0.56
NXF1-204ENST00000527064 PDE6BP35913 854 aa18.57■□□□□ 0.56
NXF1-204ENST00000527064 GOLGA2Q08379 1002 aa18.57■□□□□ 0.56
NXF1-204ENST00000527064 AIMP1Q12904 312 aaKnown RBP18.57■□□□□ 0.56
NXF1-204ENST00000527064 HSP90AB3PQ58FF7 597 aa18.57■□□□□ 0.56
NXF1-204ENST00000527064 TPTE2Q6XPS3 522 aa18.57■□□□□ 0.56
NXF1-204ENST00000527064 BRIP1Q9BX63 1249 aa18.57■□□□□ 0.56
NXF1-204ENST00000527064 NYXQ9GZU5 481 aa18.57■□□□□ 0.56
NXF1-204ENST00000527064 PIM2Q9P1W9 311 aa18.57■□□□□ 0.56
NXF1-204ENST00000527064 UTRNP46939 3433 aa18.57■□□□□ 0.56
NXF1-204ENST00000527064 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
NXF1-204ENST00000527064 MIER1Q8N108 512 aa18.56■□□□□ 0.56
NXF1-204ENST00000527064 BRCA1P38398 1863 aaKnown RBP18.56■□□□□ 0.56
NXF1-204ENST00000527064 DLEC1Q9Y238 1755 aa18.55■□□□□ 0.56
NXF1-204ENST00000527064 ZNF521Q96K83 1311 aa18.55■□□□□ 0.56
NXF1-204ENST00000527064 H0YIN7 160 aa18.55■□□□□ 0.56
NXF1-204ENST00000527064 TSPYL6Q8N831 410 aa18.55■□□□□ 0.56
NXF1-204ENST00000527064 STK31Q9BXU1 1019 aa18.55■□□□□ 0.56
NXF1-204ENST00000527064 WWC3Q9ULE0 1092 aa18.55■□□□□ 0.56
NXF1-204ENST00000527064 KCNA3P22001 575 aa18.54■□□□□ 0.56
NXF1-204ENST00000527064 GTF2E1P29083 439 aaPredicted RBP18.54■□□□□ 0.56
NXF1-204ENST00000527064 CHRNA5P30532 468 aa18.54■□□□□ 0.56
NXF1-204ENST00000527064 PARP10Q53GL7 1025 aa18.54■□□□□ 0.56
NXF1-204ENST00000527064 DALRD3Q5D0E6 543 aaKnown RBP18.54■□□□□ 0.56
NXF1-204ENST00000527064 C2CD5Q86YS7 1000 aa18.54■□□□□ 0.56
NXF1-204ENST00000527064 ZNF34Q8IZ26 560 aa18.54■□□□□ 0.56
NXF1-204ENST00000527064 PLBD2Q8NHP8 589 aa18.54■□□□□ 0.56
NXF1-204ENST00000527064 BCS1LQ9Y276 419 aa18.54■□□□□ 0.56
NXF1-204ENST00000527064 ANKRD31Q8N7Z5 1873 aa18.54■□□□□ 0.56
NXF1-204ENST00000527064 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
NXF1-204ENST00000527064 GPTP24298 496 aa18.53■□□□□ 0.56
NXF1-204ENST00000527064 ANKRD13DQ6ZTN6 518 aa18.53■□□□□ 0.56
NXF1-204ENST00000527064 PPP1R42Q7Z4L9 355 aa18.53■□□□□ 0.56
NXF1-204ENST00000527064 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
NXF1-204ENST00000527064 FAM177BA6PVY3 158 aa18.52■□□□□ 0.56
NXF1-204ENST00000527064 CHD4Q14839 1912 aa18.51■□□□□ 0.55
NXF1-204ENST00000527064 DDX58O95786 925 aaKnown RBP18.51■□□□□ 0.55
NXF1-204ENST00000527064 YY1P25490 414 aa18.51■□□□□ 0.55
NXF1-204ENST00000527064 CCDC24Q8N4L8 307 aa18.51■□□□□ 0.55
NXF1-204ENST00000527064 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
NXF1-204ENST00000527064 ARFGEF1Q9Y6D6 1849 aa18.51■□□□□ 0.55
NXF1-204ENST00000527064 RNF123Q5XPI4 1314 aa18.5■□□□□ 0.55
NXF1-204ENST00000527064 RIC1Q4ADV7 1423 aa18.5■□□□□ 0.55
NXF1-204ENST00000527064 COL11A2P13942 1736 aaPredicted RBP18.5■□□□□ 0.55
NXF1-204ENST00000527064 E9PSI1 815 aa18.5■□□□□ 0.55
NXF1-204ENST00000527064 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
NXF1-204ENST00000527064 TCIRG1Q13488 830 aa18.5■□□□□ 0.55
NXF1-204ENST00000527064 TTLL6Q8N841 843 aa18.5■□□□□ 0.55
NXF1-204ENST00000527064 NTSR2O95665 410 aa18.49■□□□□ 0.55
NXF1-204ENST00000527064 SUSD4Q5VX71 490 aa18.49■□□□□ 0.55
NXF1-204ENST00000527064 RIC3Q7Z5B4 369 aa18.49■□□□□ 0.55
NXF1-204ENST00000527064 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
NXF1-204ENST00000527064 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
NXF1-204ENST00000527064 ARFGEF2Q9Y6D5 1785 aa18.49■□□□□ 0.55
NXF1-204ENST00000527064 STYK1Q6J9G0 422 aa18.48■□□□□ 0.55
NXF1-204ENST00000527064 NUTM1Q86Y26 1132 aa18.48■□□□□ 0.55
NXF1-204ENST00000527064 ZNF622Q969S3 477 aaKnown RBP eCLIP18.48■□□□□ 0.554e-8■□□□□ 10
NXF1-204ENST00000527064 MASTLQ96GX5 879 aa18.48■□□□□ 0.55
NXF1-204ENST00000527064 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
NXF1-204ENST00000527064 KLRG2A4D1S0 409 aaPredicted RBP18.47■□□□□ 0.55
NXF1-204ENST00000527064 VAMP4O75379 141 aa18.47■□□□□ 0.55
NXF1-204ENST00000527064 SRGNP10124 158 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms