RNA–Protein interactions for RNA: ENST00000526396.3

TRIM49D2-201, Transcript of tripartite motif containing 49D2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM49D2, Length 1,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D2-201ENST00000526396 ZNF330Q9Y3S2 320 aaPredicted RBP11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 SOS1Q07889 1333 aaPredicted RBP11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 VAMP4O75379 141 aa11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 CENPBP07199 599 aaPredicted RBP11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 MYL6BP14649 208 aa11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 LRP10Q7Z4F1 713 aa11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 COL23A1Q86Y22 540 aaPredicted RBP11.43□□□□□ -0.58
TRIM49D2-201ENST00000526396 CASZ1Q86V15 1759 aa11.42□□□□□ -0.58
TRIM49D2-201ENST00000526396 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
TRIM49D2-201ENST00000526396 HOXB7P09629 217 aa11.42□□□□□ -0.58
TRIM49D2-201ENST00000526396 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
TRIM49D2-201ENST00000526396 TEX13AQ9BXU3 409 aaPredicted RBP11.42□□□□□ -0.58
TRIM49D2-201ENST00000526396 SRP68Q9UHB9 627 aaKnown RBP11.42□□□□□ -0.58
TRIM49D2-201ENST00000526396 COL15A1P39059 1388 aa11.42□□□□□ -0.58
TRIM49D2-201ENST00000526396 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
TRIM49D2-201ENST00000526396 QSER1Q2KHR3 1735 aa11.41□□□□□ -0.58
TRIM49D2-201ENST00000526396 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
TRIM49D2-201ENST00000526396 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
TRIM49D2-201ENST00000526396 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
TRIM49D2-201ENST00000526396 FXR2P51116 673 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRIM49D2-201ENST00000526396 TTLL7Q6ZT98 887 aa11.4□□□□□ -0.58
TRIM49D2-201ENST00000526396 BCL2L13Q9BXK5 485 aa11.4□□□□□ -0.58
TRIM49D2-201ENST00000526396 PHAXQ9H814 394 aaKnown RBP11.4□□□□□ -0.58
TRIM49D2-201ENST00000526396 SSFA2P28290 1259 aa11.39□□□□□ -0.59
TRIM49D2-201ENST00000526396 IL6STP40189 918 aaPredicted RBP11.39□□□□□ -0.59
TRIM49D2-201ENST00000526396 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
TRIM49D2-201ENST00000526396 G2E3Q7L622 706 aa11.39□□□□□ -0.59
TRIM49D2-201ENST00000526396 DDX21Q9NR30 783 aaKnown RBP eCLIP11.39□□□□□ -0.59
TRIM49D2-201ENST00000526396 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
TRIM49D2-201ENST00000526396 SCN7AQ01118 1682 aa11.39□□□□□ -0.59
TRIM49D2-201ENST00000526396 ZBTB7AO95365 584 aa11.38□□□□□ -0.59
TRIM49D2-201ENST00000526396 AIMP1Q12904 312 aaKnown RBP11.38□□□□□ -0.59
TRIM49D2-201ENST00000526396 TRAPPC3LQ5T215 181 aa11.38□□□□□ -0.59
TRIM49D2-201ENST00000526396 XAGE3Q8WTP9 111 aa11.38□□□□□ -0.59
TRIM49D2-201ENST00000526396 SSH1Q8WYL5 1049 aa11.38□□□□□ -0.59
TRIM49D2-201ENST00000526396 BCL2L12Q9HB09 334 aa11.38□□□□□ -0.59
TRIM49D2-201ENST00000526396 BCORQ6W2J9 1755 aa11.38□□□□□ -0.59
TRIM49D2-201ENST00000526396 ERBB4Q15303 1308 aa11.37□□□□□ -0.59
TRIM49D2-201ENST00000526396 USP42Q9H9J4 1324 aaKnown RBP11.37□□□□□ -0.59
TRIM49D2-201ENST00000526396 CCDC30Q5VVM6 783 aa11.37□□□□□ -0.59
TRIM49D2-201ENST00000526396 USPL1Q5W0Q7 1092 aa11.37□□□□□ -0.59
TRIM49D2-201ENST00000526396 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
TRIM49D2-201ENST00000526396 DZIP3Q86Y13 1208 aaKnown RBP11.37□□□□□ -0.59
TRIM49D2-201ENST00000526396 ARXQ96QS3 562 aa11.37□□□□□ -0.59
TRIM49D2-201ENST00000526396 DBF4Q9UBU7 674 aaPredicted RBP11.37□□□□□ -0.59
TRIM49D2-201ENST00000526396 CAMTA2O94983 1202 aa11.36□□□□□ -0.59
TRIM49D2-201ENST00000526396 GYS1P13807 737 aa11.36□□□□□ -0.59
TRIM49D2-201ENST00000526396 RFC4P35249 363 aa11.36□□□□□ -0.59
TRIM49D2-201ENST00000526396 HLFQ16534 295 aa11.36□□□□□ -0.59
TRIM49D2-201ENST00000526396 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
TRIM49D2-201ENST00000526396 ZBTB3Q9H5J0 574 aa11.36□□□□□ -0.59
TRIM49D2-201ENST00000526396 RARSP54136 660 aaKnown RBP11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 STK31Q9BXU1 1019 aa11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 GOLGB1Q14789 3259 aaKnown RBP11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 BCAR3O75815 825 aa11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 SMC4Q9NTJ3 1288 aa11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 HYPKQ9NX55 129 aa11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 NARFQ9UHQ1 456 aa11.35□□□□□ -0.59
TRIM49D2-201ENST00000526396 ADCY9O60503 1353 aa11.34□□□□□ -0.59
TRIM49D2-201ENST00000526396 MAP3K15Q6ZN16 1313 aa11.34□□□□□ -0.59
TRIM49D2-201ENST00000526396 ARFGEF2Q9Y6D5 1785 aa11.34□□□□□ -0.59
TRIM49D2-201ENST00000526396 FLIIQ13045 1269 aa11.34□□□□□ -0.59
TRIM49D2-201ENST00000526396 TBC1D9BQ66K14 1250 aa11.34□□□□□ -0.59
TRIM49D2-201ENST00000526396 PIP4P2Q8N4L2 257 aa11.34□□□□□ -0.59
TRIM49D2-201ENST00000526396 FLAD1Q8NFF5 587 aa11.34□□□□□ -0.59
TRIM49D2-201ENST00000526396 A0A087WZG4 1122 aa11.33□□□□□ -0.6
TRIM49D2-201ENST00000526396 ZPR1O75312 459 aa11.33□□□□□ -0.6
TRIM49D2-201ENST00000526396 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
TRIM49D2-201ENST00000526396 TNNQ9UQP3 1299 aa11.33□□□□□ -0.6
TRIM49D2-201ENST00000526396 F6X3S4 739 aa11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 CT47B1P0C2W7 299 aaPredicted RBP11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 DDR1Q08345 913 aa11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 ALDH1L2Q3SY69 923 aa11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 COL24A1Q17RW2 1714 aa11.32□□□□□ -0.6
TRIM49D2-201ENST00000526396 UBN2Q6ZU65 1347 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 MMP10P09238 476 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 GPTP24298 496 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 PTGER2P43116 358 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 FKBP5Q13451 457 aaPredicted RBP11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 NFIXQ14938 502 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 ANKRD13DQ6ZTN6 518 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 PLBD2Q8NHP8 589 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 SGIP1Q9BQI5 828 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 MTFR1LQ9H019 292 aa11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 NOB1Q9ULX3 412 aaKnown RBP11.31□□□□□ -0.6
TRIM49D2-201ENST00000526396 MAP3K2Q9Y2U5 619 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms