RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 NECTIN2Q92692 538 aa18.69■□□□□ 0.58
LRRK1-204ENST00000525617 HDGFL1Q5TGJ6 251 aa18.68■□□□□ 0.58
LRRK1-204ENST00000525617 MAP3K15Q6ZN16 1313 aa18.68■□□□□ 0.58
LRRK1-204ENST00000525617 CHD4Q14839 1912 aa18.67■□□□□ 0.58
LRRK1-204ENST00000525617 KIAA1551Q9HCM1 1747 aa18.67■□□□□ 0.58
LRRK1-204ENST00000525617 DUSP27Q5VZP5 1158 aa18.67■□□□□ 0.58
LRRK1-204ENST00000525617 CNBD1Q8NA66 436 aa18.67■□□□□ 0.58
LRRK1-204ENST00000525617 PIM2Q9P1W9 311 aa18.67■□□□□ 0.58
LRRK1-204ENST00000525617 NIP7Q9Y221 180 aaKnown RBP eCLIP18.67■□□□□ 0.58
LRRK1-204ENST00000525617 BCS1LQ9Y276 419 aa18.67■□□□□ 0.58
LRRK1-204ENST00000525617 ST5P78524 1137 aa18.66■□□□□ 0.58
LRRK1-204ENST00000525617 PDIA6Q15084 440 aa18.66■□□□□ 0.58
LRRK1-204ENST00000525617 HLFQ16534 295 aa18.66■□□□□ 0.58
LRRK1-204ENST00000525617 TTLL7Q6ZT98 887 aa18.66■□□□□ 0.58
LRRK1-204ENST00000525617 NBPF5PQ86XG9 351 aaPredicted RBP18.66■□□□□ 0.58
LRRK1-204ENST00000525617 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
LRRK1-204ENST00000525617 DDX21Q9NR30 783 aaKnown RBP eCLIP18.66■□□□□ 0.58
LRRK1-204ENST00000525617 SALL2Q9Y467 1007 aaPredicted RBP18.66■□□□□ 0.58
LRRK1-204ENST00000525617 PDE6BP35913 854 aa18.65■□□□□ 0.58
LRRK1-204ENST00000525617 PRR5LQ6MZQ0 368 aa18.65■□□□□ 0.58
LRRK1-204ENST00000525617 ZBTB3Q9H5J0 574 aa18.65■□□□□ 0.58
LRRK1-204ENST00000525617 DBF4Q9UBU7 674 aaPredicted RBP18.65■□□□□ 0.58
LRRK1-204ENST00000525617 IL16Q14005 1332 aa18.65■□□□□ 0.58
LRRK1-204ENST00000525617 H0YIN7 160 aa18.64■□□□□ 0.57
LRRK1-204ENST00000525617 ANXA1P04083 346 aa18.64■□□□□ 0.57
LRRK1-204ENST00000525617 KCNA3P22001 575 aa18.64■□□□□ 0.57
LRRK1-204ENST00000525617 CHRNA5P30532 468 aa18.64■□□□□ 0.57
LRRK1-204ENST00000525617 TPTE2Q6XPS3 522 aa18.64■□□□□ 0.57
LRRK1-204ENST00000525617 BRIP1Q9BX63 1249 aa18.64■□□□□ 0.57
LRRK1-204ENST00000525617 CHPF2Q9P2E5 772 aa18.64■□□□□ 0.57
LRRK1-204ENST00000525617 PDZRN3Q9UPQ7 1066 aa18.64■□□□□ 0.57
LRRK1-204ENST00000525617 NUP98P52948 1817 aa18.63■□□□□ 0.57
LRRK1-204ENST00000525617 ELL2O00472 640 aaPredicted RBP18.63■□□□□ 0.57
LRRK1-204ENST00000525617 GTF2E1P29083 439 aaPredicted RBP18.63■□□□□ 0.57
LRRK1-204ENST00000525617 AIMP1Q12904 312 aaKnown RBP18.63■□□□□ 0.57
LRRK1-204ENST00000525617 PROSER3Q2NL68 480 aa18.63■□□□□ 0.57
LRRK1-204ENST00000525617 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
LRRK1-204ENST00000525617 GIGYF2Q6Y7W6 1299 aaKnown RBP18.63■□□□□ 0.57
LRRK1-204ENST00000525617 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
LRRK1-204ENST00000525617 LRP10Q7Z4F1 713 aa18.63■□□□□ 0.57
LRRK1-204ENST00000525617 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
LRRK1-204ENST00000525617 CCER2I3L3R5 266 aa18.62■□□□□ 0.57
LRRK1-204ENST00000525617 C2CD5Q86YS7 1000 aa18.62■□□□□ 0.57
LRRK1-204ENST00000525617 CCDC24Q8N4L8 307 aa18.62■□□□□ 0.57
LRRK1-204ENST00000525617 XAGE3Q8WTP9 111 aa18.62■□□□□ 0.57
LRRK1-204ENST00000525617 HYPKQ9NX55 129 aa18.62■□□□□ 0.57
LRRK1-204ENST00000525617 BRCA1P38398 1863 aaKnown RBP18.61■□□□□ 0.57
LRRK1-204ENST00000525617 ATP10DQ9P241 1426 aa18.61■□□□□ 0.57
LRRK1-204ENST00000525617 FAM177BA6PVY3 158 aa18.61■□□□□ 0.57
LRRK1-204ENST00000525617 TSR2Q969E8 191 aaKnown RBP18.61■□□□□ 0.57
LRRK1-204ENST00000525617 NYXQ9GZU5 481 aa18.61■□□□□ 0.57
LRRK1-204ENST00000525617 HSP90AB3PQ58FF7 597 aa18.6■□□□□ 0.57
LRRK1-204ENST00000525617 C8orf58Q8NAV2 365 aa18.6■□□□□ 0.57
LRRK1-204ENST00000525617 GPTP24298 496 aa18.59■□□□□ 0.57
LRRK1-204ENST00000525617 CCDC30Q5VVM6 783 aa18.59■□□□□ 0.57
LRRK1-204ENST00000525617 TTLL6Q8N841 843 aa18.59■□□□□ 0.57
LRRK1-204ENST00000525617 ANKRD31Q8N7Z5 1873 aa18.58■□□□□ 0.57
LRRK1-204ENST00000525617 PARP10Q53GL7 1025 aa18.58■□□□□ 0.56
LRRK1-204ENST00000525617 DIEXFQ68CQ4 756 aaKnown RBP18.58■□□□□ 0.56
LRRK1-204ENST00000525617 ARHGAP27Q6ZUM4 889 aa18.58■□□□□ 0.56
LRRK1-204ENST00000525617 PPP1R42Q7Z4L9 355 aa18.58■□□□□ 0.56
LRRK1-204ENST00000525617 ZNF34Q8IZ26 560 aa18.58■□□□□ 0.56
LRRK1-204ENST00000525617 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.56
LRRK1-204ENST00000525617 ARFGEF1Q9Y6D6 1849 aa18.58■□□□□ 0.56
LRRK1-204ENST00000525617 DLEC1Q9Y238 1755 aa18.58■□□□□ 0.56
LRRK1-204ENST00000525617 ANKRD13DQ6ZTN6 518 aa18.57■□□□□ 0.56
LRRK1-204ENST00000525617 GOLGA2Q08379 1002 aa18.56■□□□□ 0.56
LRRK1-204ENST00000525617 TWISTNBQ3B726 338 aaPredicted RBP18.56■□□□□ 0.56
LRRK1-204ENST00000525617 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
LRRK1-204ENST00000525617 PLBD2Q8NHP8 589 aa18.56■□□□□ 0.56
LRRK1-204ENST00000525617 MYH16Q9H6N6 1097 aa18.56■□□□□ 0.56
LRRK1-204ENST00000525617 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
LRRK1-204ENST00000525617 UBN2Q6ZU65 1347 aa18.55■□□□□ 0.56
LRRK1-204ENST00000525617 FANCIQ9NVI1 1328 aa18.55■□□□□ 0.56
LRRK1-204ENST00000525617 SUSD4Q5VX71 490 aa18.55■□□□□ 0.56
LRRK1-204ENST00000525617 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
LRRK1-204ENST00000525617 CNKSR1Q969H4 720 aa18.55■□□□□ 0.56
LRRK1-204ENST00000525617 STK31Q9BXU1 1019 aa18.55■□□□□ 0.56
LRRK1-204ENST00000525617 SRGNP10124 158 aa18.54■□□□□ 0.56
LRRK1-204ENST00000525617 TCIRG1Q13488 830 aa18.54■□□□□ 0.56
LRRK1-204ENST00000525617 NUTM1Q86Y26 1132 aa18.54■□□□□ 0.56
LRRK1-204ENST00000525617 MASTLQ96GX5 879 aa18.54■□□□□ 0.56
LRRK1-204ENST00000525617 NPR1P16066 1061 aa18.53■□□□□ 0.56
LRRK1-204ENST00000525617 RIC3Q7Z5B4 369 aa18.53■□□□□ 0.56
LRRK1-204ENST00000525617 UTP14AQ9BVJ6 771 aaKnown RBP18.53■□□□□ 0.56
LRRK1-204ENST00000525617 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
LRRK1-204ENST00000525617 KLRG2A4D1S0 409 aaPredicted RBP18.52■□□□□ 0.56
LRRK1-204ENST00000525617 NTSR2O95665 410 aa18.52■□□□□ 0.56
LRRK1-204ENST00000525617 DDX58O95786 925 aaKnown RBP18.52■□□□□ 0.56
LRRK1-204ENST00000525617 ERFEQ4G0M1 354 aa18.52■□□□□ 0.56
LRRK1-204ENST00000525617 PHAXQ9H814 394 aaKnown RBP18.52■□□□□ 0.56
LRRK1-204ENST00000525617 COL11A2P13942 1736 aaPredicted RBP18.52■□□□□ 0.55
LRRK1-204ENST00000525617 RNF123Q5XPI4 1314 aa18.51■□□□□ 0.55
LRRK1-204ENST00000525617 NLRP10Q86W26 655 aa18.51■□□□□ 0.55
LRRK1-204ENST00000525617 ZNF784Q8NCA9 323 aaPredicted RBP18.51■□□□□ 0.55
LRRK1-204ENST00000525617 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
LRRK1-204ENST00000525617 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
LRRK1-204ENST00000525617 ALDH1B1P30837 517 aa18.49■□□□□ 0.55
LRRK1-204ENST00000525617 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
LRRK1-204ENST00000525617 ABCC12Q96J65 1359 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms