RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 ZCCHC2Q9C0B9 1178 aaKnown RBP10.41□□□□□ -0.74
CPNE3-207ENST00000523588 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.74
CPNE3-207ENST00000523588 GPR25O00155 361 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
CPNE3-207ENST00000523588 COX20Q5RI15 118 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 LRRC69Q6ZNQ3 347 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 ZNF280CQ8ND82 737 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 SUSD3Q96L08 255 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 SAP130Q9H0E3 1048 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 NDFIP2Q9NV92 336 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 SEPT3Q9UH03 358 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 LRFN2Q9ULH4 789 aa10.4□□□□□ -0.74
CPNE3-207ENST00000523588 HSH2DQ96JZ2 352 aa10.39□□□□□ -0.75
CPNE3-207ENST00000523588 BCS1LQ9Y276 419 aa10.39□□□□□ -0.75
CPNE3-207ENST00000523588 BNIP3LO60238 219 aa10.38□□□□□ -0.75
CPNE3-207ENST00000523588 GMPRP36959 345 aa10.38□□□□□ -0.75
CPNE3-207ENST00000523588 GAS6Q14393 721 aa10.38□□□□□ -0.75
CPNE3-207ENST00000523588 NAA30Q147X3 362 aaPredicted RBP10.38□□□□□ -0.75
CPNE3-207ENST00000523588 SAMD5Q5TGI4 173 aa10.38□□□□□ -0.75
CPNE3-207ENST00000523588 FIGNL1Q6PIW4 674 aa10.38□□□□□ -0.75
CPNE3-207ENST00000523588 KLK14Q9P0G3 267 aa10.38□□□□□ -0.75
CPNE3-207ENST00000523588 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
CPNE3-207ENST00000523588 DGKZQ13574 1117 aa10.37□□□□□ -0.75
CPNE3-207ENST00000523588 C16orf46Q6P387 395 aa10.37□□□□□ -0.75
CPNE3-207ENST00000523588 FOXR1Q6PIV2 292 aa10.37□□□□□ -0.75
CPNE3-207ENST00000523588 ANKIB1Q9P2G1 1089 aa10.37□□□□□ -0.75
CPNE3-207ENST00000523588 HCN2Q9UL51 889 aa10.37□□□□□ -0.75
CPNE3-207ENST00000523588 GJA3Q9Y6H8 435 aa10.37□□□□□ -0.75
CPNE3-207ENST00000523588 ATXN7O15265 892 aaPredicted RBP10.36□□□□□ -0.75
CPNE3-207ENST00000523588 KRT76Q01546 638 aa10.36□□□□□ -0.75
CPNE3-207ENST00000523588 C11orf91Q3C1V1 193 aa10.36□□□□□ -0.75
CPNE3-207ENST00000523588 RNFT1Q5M7Z0 435 aa10.36□□□□□ -0.75
CPNE3-207ENST00000523588 ABHD17AQ96GS6 310 aa10.36□□□□□ -0.75
CPNE3-207ENST00000523588 CFHR5Q9BXR6 569 aa10.36□□□□□ -0.75
CPNE3-207ENST00000523588 COL25A1Q9BXS0 654 aaPredicted RBP10.36□□□□□ -0.75
CPNE3-207ENST00000523588 NEUROD4Q9HD90 331 aa10.36□□□□□ -0.75
CPNE3-207ENST00000523588 FAM157BP0CG42 384 aa10.35□□□□□ -0.75
CPNE3-207ENST00000523588 TNP2Q05952 138 aa10.35□□□□□ -0.75
CPNE3-207ENST00000523588 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
CPNE3-207ENST00000523588 TRERF1Q96PN7 1200 aa10.35□□□□□ -0.75
CPNE3-207ENST00000523588 DMGDHQ9UI17 866 aaKnown RBP10.35□□□□□ -0.75
CPNE3-207ENST00000523588 TNFRSF10BO14763 440 aa10.34□□□□□ -0.75
CPNE3-207ENST00000523588 EFSO43281 561 aa10.34□□□□□ -0.75
CPNE3-207ENST00000523588 HIF1AQ16665 826 aa10.34□□□□□ -0.75
CPNE3-207ENST00000523588 IER5Q5VY09 327 aa10.34□□□□□ -0.75
CPNE3-207ENST00000523588 TRAIPQ9BWF2 469 aa10.34□□□□□ -0.75
CPNE3-207ENST00000523588 ATXN7L1Q9ULK2 861 aaPredicted RBP10.34□□□□□ -0.75
CPNE3-207ENST00000523588 TGFBR3LH3BV60 316 aa10.33□□□□□ -0.76
CPNE3-207ENST00000523588 DCDC2BA2VCK2 349 aa10.32□□□□□ -0.76
CPNE3-207ENST00000523588 MAPTP10636 758 aaKnown RBP10.32□□□□□ -0.76
CPNE3-207ENST00000523588 TYRO3Q06418 890 aa10.32□□□□□ -0.76
CPNE3-207ENST00000523588 FAM26DQ5JW98 314 aa10.32□□□□□ -0.76
CPNE3-207ENST00000523588 BTLAQ7Z6A9 289 aa10.32□□□□□ -0.76
CPNE3-207ENST00000523588 GTF3C2Q8WUA4 911 aaPredicted RBP10.32□□□□□ -0.76
CPNE3-207ENST00000523588 IFT43Q96FT9 208 aa10.32□□□□□ -0.76
CPNE3-207ENST00000523588 PHF24Q9UPV7 400 aa10.32□□□□□ -0.76
CPNE3-207ENST00000523588 KHNYNO15037 678 aaKnown RBP10.31□□□□□ -0.76
CPNE3-207ENST00000523588 BRD1O95696 1058 aa10.31□□□□□ -0.76
CPNE3-207ENST00000523588 STRN4Q9NRL3 753 aa10.31□□□□□ -0.76
CPNE3-207ENST00000523588 FGFR3P22607 806 aa10.3□□□□□ -0.76
CPNE3-207ENST00000523588 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
CPNE3-207ENST00000523588 TXNDC2Q86VQ3 553 aa10.3□□□□□ -0.76
CPNE3-207ENST00000523588 ETFBKMTQ8IXQ9 262 aa10.3□□□□□ -0.76
CPNE3-207ENST00000523588 CEP63Q96MT8 703 aa10.3□□□□□ -0.76
CPNE3-207ENST00000523588 CNTNAP3BQ96NU0 1288 aa10.3□□□□□ -0.76
CPNE3-207ENST00000523588 CNTNAP3Q9BZ76 1288 aa10.3□□□□□ -0.76
CPNE3-207ENST00000523588 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
CPNE3-207ENST00000523588 WIPF1O43516 503 aa10.29□□□□□ -0.76
CPNE3-207ENST00000523588 MICAL2O94851 1124 aa10.29□□□□□ -0.76
CPNE3-207ENST00000523588 BRD2P25440 801 aaKnown RBP10.29□□□□□ -0.76
CPNE3-207ENST00000523588 CTBSQ01459 385 aa10.29□□□□□ -0.76
CPNE3-207ENST00000523588 HELQQ8TDG4 1101 aa10.29□□□□□ -0.76
CPNE3-207ENST00000523588 MBIPQ9NS73 344 aa10.29□□□□□ -0.76
CPNE3-207ENST00000523588 STIM2Q9P246 746 aa10.29□□□□□ -0.76
CPNE3-207ENST00000523588 C2CD2LO14523 706 aa10.28□□□□□ -0.76
CPNE3-207ENST00000523588 MX2P20592 715 aa10.28□□□□□ -0.76
CPNE3-207ENST00000523588 INPP5BP32019 993 aa10.28□□□□□ -0.76
CPNE3-207ENST00000523588 SFSWAPQ12872 951 aaKnown RBP10.28□□□□□ -0.76
CPNE3-207ENST00000523588 LAMC2Q13753 1193 aa10.28□□□□□ -0.76
CPNE3-207ENST00000523588 BRD7Q9NPI1 651 aa10.28□□□□□ -0.76
CPNE3-207ENST00000523588 CD33P20138 364 aa10.27□□□□□ -0.77
CPNE3-207ENST00000523588 GRNP28799 593 aaKnown RBP10.27□□□□□ -0.77
CPNE3-207ENST00000523588 IDH3AP50213 366 aa10.27□□□□□ -0.77
CPNE3-207ENST00000523588 KCNQ4P56696 695 aa10.27□□□□□ -0.77
CPNE3-207ENST00000523588 TREML1Q86YW5 311 aa10.27□□□□□ -0.77
CPNE3-207ENST00000523588 MTMR7Q9Y216 660 aa10.27□□□□□ -0.77
CPNE3-207ENST00000523588 OPLAHO14841 1288 aa10.26□□□□□ -0.77
CPNE3-207ENST00000523588 ZBTB39O15060 712 aa10.26□□□□□ -0.77
CPNE3-207ENST00000523588 MTMR3Q13615 1198 aa10.26□□□□□ -0.77
CPNE3-207ENST00000523588 GRIN2CQ14957 1233 aa10.26□□□□□ -0.77
CPNE3-207ENST00000523588 FAM182BQ5T319 152 aa10.26□□□□□ -0.77
CPNE3-207ENST00000523588 MARK1Q9P0L2 795 aa10.26□□□□□ -0.77
CPNE3-207ENST00000523588 SERPINB4P48594 390 aa10.25□□□□□ -0.77
CPNE3-207ENST00000523588 SRSF11Q05519 484 aaKnown RBP10.25□□□□□ -0.77
CPNE3-207ENST00000523588 IGF1RP08069 1367 aa10.25□□□□□ -0.77
CPNE3-207ENST00000523588 SLURP2P0DP57 97 aa10.24□□□□□ -0.77
CPNE3-207ENST00000523588 PDIA4P13667 645 aaKnown RBP10.24□□□□□ -0.77
CPNE3-207ENST00000523588 NPR3P17342 541 aa10.24□□□□□ -0.77
CPNE3-207ENST00000523588 ANO2Q9NQ90 1003 aa10.24□□□□□ -0.77
CPNE3-207ENST00000523588 KCNH4Q9UQ05 1017 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms