RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 BABAM1Q9NWV8 329 aa8.83□□□□□ -1
SPIDR-218ENST00000522222 TBC1D2BQ9UPU7 963 aa8.83□□□□□ -1
SPIDR-218ENST00000522222 LAS1LQ9Y4W2 734 aaKnown RBP8.83□□□□□ -1
SPIDR-218ENST00000522222 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
SPIDR-218ENST00000522222 N4BP2Q86UW6 1770 aaPredicted RBP8.82□□□□□ -1
SPIDR-218ENST00000522222 CHL1O00533 1208 aa8.82□□□□□ -1
SPIDR-218ENST00000522222 KRT24Q2M2I5 525 aa8.82□□□□□ -1
SPIDR-218ENST00000522222 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
SPIDR-218ENST00000522222 CARMIL3Q8ND23 1372 aa8.82□□□□□ -1
SPIDR-218ENST00000522222 YBX3P16989 372 aaKnown RBP eCLIP8.81□□□□□ -1
SPIDR-218ENST00000522222 TM4SF1P30408 202 aa8.81□□□□□ -1
SPIDR-218ENST00000522222 TBC1D9BQ66K14 1250 aa8.81□□□□□ -1
SPIDR-218ENST00000522222 NPM2Q86SE8 214 aaKnown RBP8.81□□□□□ -1
SPIDR-218ENST00000522222 MBIPQ9NS73 344 aa8.81□□□□□ -1
SPIDR-218ENST00000522222 IFT57Q9NWB7 429 aa8.81□□□□□ -1
SPIDR-218ENST00000522222 WWC3Q9ULE0 1092 aa8.81□□□□□ -1
SPIDR-218ENST00000522222 BRCA1P38398 1863 aaKnown RBP8.81□□□□□ -1
SPIDR-218ENST00000522222 ERBB4Q15303 1308 aa8.8□□□□□ -1
SPIDR-218ENST00000522222 FANCIQ9NVI1 1328 aa8.8□□□□□ -1
SPIDR-218ENST00000522222 COL11A2P13942 1736 aaPredicted RBP8.8□□□□□ -1
SPIDR-218ENST00000522222 ZNF853P0CG23 659 aa8.8□□□□□ -1
SPIDR-218ENST00000522222 CALD1Q05682 793 aaKnown RBP8.8□□□□□ -1
SPIDR-218ENST00000522222 GPR162Q16538 588 aa8.8□□□□□ -1
SPIDR-218ENST00000522222 PROSER3Q2NL68 480 aa8.8□□□□□ -1
SPIDR-218ENST00000522222 LHX8Q68G74 356 aa8.8□□□□□ -1
SPIDR-218ENST00000522222 BICDL1Q6ZP65 573 aa8.8□□□□□ -1
SPIDR-218ENST00000522222 CFAP44Q96MT7 982 aa8.8□□□□□ -1
SPIDR-218ENST00000522222 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 DLEC1Q9Y238 1755 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 ANXA1P04083 346 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 MYL6BP14649 208 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 EIF2S2P20042 333 aaKnown RBP8.79□□□□□ -1
SPIDR-218ENST00000522222 GNAI1P63096 354 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 CCDC27Q2M243 656 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 LRP10Q7Z4F1 713 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 FAM9BQ8IZU0 186 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 NGEFQ8N5V2 710 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 NECTIN2Q92692 538 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 ZNF652Q9Y2D9 606 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 RBM19Q9Y4C8 960 aaKnown RBP8.79□□□□□ -1
SPIDR-218ENST00000522222 ATP10DQ9P241 1426 aa8.79□□□□□ -1
SPIDR-218ENST00000522222 RGL2O15211 777 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 SERPINB2P05120 415 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 HOXB7P09629 217 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 DPEP1P16444 411 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 PDIA6Q15084 440 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 HDGFL1Q5TGJ6 251 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 DUSP27Q5VZP5 1158 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 KIF6Q6ZMV9 814 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 TTLL7Q6ZT98 887 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 WWC1Q8IX03 1113 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 MAP3K15Q6ZN16 1313 aa8.78□□□□□ -1
SPIDR-218ENST00000522222 GOLGB1Q14789 3259 aaKnown RBP8.77□□□□□ -1.01
SPIDR-218ENST00000522222 ANKRD36CQ5JPF3 1778 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 A0A0G2JLW4 131 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 CHRNA5P30532 468 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 TGFB2P61812 414 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 HLFQ16534 295 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 PRR5LQ6MZQ0 368 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 CLEC4GQ6UXB4 293 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 CNBD1Q8NA66 436 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 TSR2Q969E8 191 aaKnown RBP8.77□□□□□ -1.01
SPIDR-218ENST00000522222 ZBTB3Q9H5J0 574 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 CHPF2Q9P2E5 772 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 SALL2Q9Y467 1007 aaPredicted RBP8.77□□□□□ -1.01
SPIDR-218ENST00000522222 TNRC6CQ9HCJ0 1690 aaKnown RBP8.77□□□□□ -1.01
SPIDR-218ENST00000522222 NUP98P52948 1817 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 IL16Q14005 1332 aa8.77□□□□□ -1.01
SPIDR-218ENST00000522222 CHD4Q14839 1912 aa8.76□□□□□ -1.01
SPIDR-218ENST00000522222 ABCC12Q96J65 1359 aa8.76□□□□□ -1.01
SPIDR-218ENST00000522222 ERVV-1B6SEH8 477 aa8.76□□□□□ -1.01
SPIDR-218ENST00000522222 CCDC24Q8N4L8 307 aa8.76□□□□□ -1.01
SPIDR-218ENST00000522222 XAGE3Q8WTP9 111 aa8.76□□□□□ -1.01
SPIDR-218ENST00000522222 SETDB2Q96T68 719 aa8.76□□□□□ -1.01
SPIDR-218ENST00000522222 DDX21Q9NR30 783 aaKnown RBP eCLIP8.76□□□□□ -1.01
SPIDR-218ENST00000522222 NIP7Q9Y221 180 aaKnown RBP eCLIP8.76□□□□□ -1.01
SPIDR-218ENST00000522222 RNF123Q5XPI4 1314 aa8.76□□□□□ -1.01
SPIDR-218ENST00000522222 UTRNP46939 3433 aa8.76□□□□□ -1.01
SPIDR-218ENST00000522222 ARFGEF1Q9Y6D6 1849 aa8.75□□□□□ -1.01
SPIDR-218ENST00000522222 IBTKQ9P2D0 1353 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-218ENST00000522222 KCNA3P22001 575 aa8.75□□□□□ -1.01
SPIDR-218ENST00000522222 GPTP24298 496 aa8.75□□□□□ -1.01
SPIDR-218ENST00000522222 YY1P25490 414 aa8.75□□□□□ -1.01
SPIDR-218ENST00000522222 NBPF5PQ86XG9 351 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-218ENST00000522222 C8orf58Q8NAV2 365 aa8.75□□□□□ -1.01
SPIDR-218ENST00000522222 BCS1LQ9Y276 419 aa8.75□□□□□ -1.01
SPIDR-218ENST00000522222 ARFGEF2Q9Y6D5 1785 aa8.75□□□□□ -1.01
SPIDR-218ENST00000522222 UBN2Q6ZU65 1347 aa8.75□□□□□ -1.01
SPIDR-218ENST00000522222 FAM177BA6PVY3 158 aa8.74□□□□□ -1.01
SPIDR-218ENST00000522222 ELL2O00472 640 aaPredicted RBP8.74□□□□□ -1.01
SPIDR-218ENST00000522222 NPHP1O15259 732 aa8.74□□□□□ -1.01
SPIDR-218ENST00000522222 GRIN3BO60391 1043 aa8.74□□□□□ -1.01
SPIDR-218ENST00000522222 ST5P78524 1137 aa8.74□□□□□ -1.01
SPIDR-218ENST00000522222 AIMP1Q12904 312 aaKnown RBP8.74□□□□□ -1.01
SPIDR-218ENST00000522222 COPS6Q7L5N1 327 aa8.74□□□□□ -1.01
SPIDR-218ENST00000522222 C2CD5Q86YS7 1000 aa8.74□□□□□ -1.01
SPIDR-218ENST00000522222 TSPYL6Q8N831 410 aa8.74□□□□□ -1.01
SPIDR-218ENST00000522222 ZNF521Q96K83 1311 aa8.74□□□□□ -1.01
SPIDR-218ENST00000522222 RIC1Q4ADV7 1423 aa8.73□□□□□ -1.01
SPIDR-218ENST00000522222 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms