RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 PRM3Q9NNZ6 103 aa5.51□□□□□ -1.53
PVT1-211ENST00000521600 HMX1Q9NP08 348 aaPredicted RBP5.51□□□□□ -1.53
PVT1-211ENST00000521600 TBC1D2BQ9UPU7 963 aa5.51□□□□□ -1.53
PVT1-211ENST00000521600 HPS5Q9UPZ3 1129 aa5.51□□□□□ -1.53
PVT1-211ENST00000521600 SLC27A5Q9Y2P5 690 aa5.51□□□□□ -1.53
PVT1-211ENST00000521600 MAP3K5Q99683 1374 aa5.51□□□□□ -1.53
PVT1-211ENST00000521600 QSER1Q2KHR3 1735 aa5.51□□□□□ -1.53
PVT1-211ENST00000521600 ATP10DQ9P241 1426 aa5.5□□□□□ -1.53
PVT1-211ENST00000521600 COL13A1Q5TAT6 717 aaPredicted RBP5.5□□□□□ -1.53
PVT1-211ENST00000521600 CCDC82Q8N4S0 544 aa5.5□□□□□ -1.53
PVT1-211ENST00000521600 PRR7Q8TB68 274 aa5.5□□□□□ -1.53
PVT1-211ENST00000521600 LRRN4Q8WUT4 740 aa5.5□□□□□ -1.53
PVT1-211ENST00000521600 WNT2BQ93097 391 aa5.5□□□□□ -1.53
PVT1-211ENST00000521600 MPHOSPH9Q99550 1183 aa5.5□□□□□ -1.53
PVT1-211ENST00000521600 PRR14Q9BWN1 585 aa5.5□□□□□ -1.53
PVT1-211ENST00000521600 TSR3Q9UJK0 312 aaKnown RBP5.5□□□□□ -1.53
PVT1-211ENST00000521600 ZNF330Q9Y3S2 320 aaPredicted RBP5.5□□□□□ -1.53
PVT1-211ENST00000521600 KAT6BQ8WYB5 2073 aa5.49□□□□□ -1.53
PVT1-211ENST00000521600 APLP1P51693 650 aa5.49□□□□□ -1.53
PVT1-211ENST00000521600 RNF19BQ6ZMZ0 732 aa5.49□□□□□ -1.53
PVT1-211ENST00000521600 USP35Q9P2H5 1018 aa5.49□□□□□ -1.53
PVT1-211ENST00000521600 NUP155O75694 1391 aa5.49□□□□□ -1.53
PVT1-211ENST00000521600 SSH2Q76I76 1423 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 ATP7BP35670 1465 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 KIAA0232Q92628 1395 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 PLSCR1O15162 318 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 PSME1Q06323 249 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 CHRNA2Q15822 529 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 GPR162Q16538 588 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 Q3C1V9 767 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 BLOC1S3Q6QNY0 202 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 RETREG3Q86VR2 466 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 WWC1Q8IX03 1113 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 YTHDC1Q96MU7 727 aaKnown RBP5.48□□□□□ -1.53
PVT1-211ENST00000521600 MTFR1LQ9H019 292 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 STRN4Q9NRL3 753 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 STK26Q9P289 416 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 PCDHB3Q9Y5E6 796 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 NDUFB9Q9Y6M9 179 aa5.48□□□□□ -1.53
PVT1-211ENST00000521600 RGPD5Q99666 1765 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 ADCY9O60503 1353 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 BTAF1O14981 1849 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 YBX3P16989 372 aaKnown RBP eCLIP5.47□□□□□ -1.532e-7■□□□□ 10.1
PVT1-211ENST00000521600 PRELPP51888 382 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 PDE3BQ13370 1112 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 DNAJC5GQ8N7S2 189 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 PMFBP1Q8TBY8 1022 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 EPS8L1Q8TE68 723 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 TRIM34Q9BYJ4 488 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 KRTAP3-3Q9BYR6 98 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 KRTAP3-2Q9BYR7 98 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 PRDM11Q9NQV5 511 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 ARHGEF28Q8N1W1 1705 aaKnown RBP5.47□□□□□ -1.53
PVT1-211ENST00000521600 OVOS2A0A0G2JMS6 1433 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 OVOS2A0A0J9YW53 1432 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 OVOS2Q6IE36 1432 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 NHSQ6T4R5 1651 aa5.47□□□□□ -1.53
PVT1-211ENST00000521600 ABCC11Q96J66 1382 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 ANKRD30BQ9BXX2 1392 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 POM121CA8CG34 1229 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 PER1O15534 1290 aaPredicted RBP5.46□□□□□ -1.54
PVT1-211ENST00000521600 SLC15A2Q16348 729 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 SCUBE3Q8IX30 993 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 NLGN2Q8NFZ4 835 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 PLSCR2Q9NRY7 297 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 WBP1LQ9NX94 342 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 ADGRF5Q8IZF2 1346 aa5.46□□□□□ -1.54
PVT1-211ENST00000521600 ITSN1Q15811 1721 aa5.45□□□□□ -1.54
PVT1-211ENST00000521600 CCER2I3L3R5 266 aa5.45□□□□□ -1.54
PVT1-211ENST00000521600 ANP32CO43423 234 aa5.45□□□□□ -1.54
PVT1-211ENST00000521600 IRF5Q13568 498 aa5.45□□□□□ -1.54
PVT1-211ENST00000521600 NR6A1Q15406 480 aa5.45□□□□□ -1.54
PVT1-211ENST00000521600 TMEM132EQ6IEE7 984 aa5.45□□□□□ -1.54
PVT1-211ENST00000521600 LARP1Q6PKG0 1096 aaKnown RBP5.45□□□□□ -1.54
PVT1-211ENST00000521600 BRICD5Q6PL45 260 aa5.45□□□□□ -1.54
PVT1-211ENST00000521600 ZNF526Q8TF50 670 aaPredicted RBP5.45□□□□□ -1.54
PVT1-211ENST00000521600 KCTD12Q96CX2 325 aaKnown RBP5.45□□□□□ -1.54
PVT1-211ENST00000521600 CCDC97Q96F63 343 aaPredicted RBP5.45□□□□□ -1.54
PVT1-211ENST00000521600 USB1Q9BQ65 265 aaKnown RBP5.45□□□□□ -1.54
PVT1-211ENST00000521600 YTHDC2Q9H6S0 1430 aaKnown RBP5.45□□□□□ -1.54
PVT1-211ENST00000521600 COL18A1P39060 1754 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 NR1I2O75469 434 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 FMNL1O95466 1100 aaPredicted RBP5.44□□□□□ -1.54
PVT1-211ENST00000521600 COPS2P61201 443 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 EIF4G2P78344 907 aaKnown RBP eCLIP5.44□□□□□ -1.542e-6■■■■□ 23.1
PVT1-211ENST00000521600 DDX10Q13206 875 aaKnown RBP5.44□□□□□ -1.54
PVT1-211ENST00000521600 TXNRD1Q16881 649 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 DESI1Q6ICB0 168 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 THSD4Q6ZMP0 1018 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 ANKARQ7Z5J8 1434 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 TNS4Q8IZW8 715 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 STK32BQ9NY57 414 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 SERPINA10Q9UK55 444 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 COL5A2P05997 1499 aaPredicted RBP5.44□□□□□ -1.54
PVT1-211ENST00000521600 PRR36Q9H6K5 1346 aa5.44□□□□□ -1.54
PVT1-211ENST00000521600 PIK3C2GO75747 1445 aa5.43□□□□□ -1.54
PVT1-211ENST00000521600 GPR37L1O60883 481 aa5.43□□□□□ -1.54
PVT1-211ENST00000521600 ZC3H6P61129 1189 aaKnown RBP5.43□□□□□ -1.54
PVT1-211ENST00000521600 VAC14Q08AM6 782 aa5.43□□□□□ -1.54
PVT1-211ENST00000521600 ZNF827Q17R98 1081 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms