RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 ST5P78524 1137 aa11.55□□□□□ -0.56
NPIPB3-205ENST00000521589 SBF1O95248 1867 aa11.55□□□□□ -0.56
NPIPB3-205ENST00000521589 KLRG2A4D1S0 409 aaPredicted RBP11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 NFKBIEO00221 500 aa11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 SRGNP10124 158 aa11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 STYK1Q6J9G0 422 aa11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 NBPF5PQ86XG9 351 aaPredicted RBP11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 RUNDC1Q96C34 613 aa11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 RNF181Q9P0P0 153 aa11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 TSPYL4Q9UJ04 414 aa11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 MAP3K15Q6ZN16 1313 aa11.54□□□□□ -0.56
NPIPB3-205ENST00000521589 LMNB1P20700 586 aa11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 RASSF7Q02833 373 aa11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 WDR43Q15061 677 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 HLFQ16534 295 aa11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 CCDC24Q8N4L8 307 aa11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 CNKSR1Q969H4 720 aa11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 ZNF622Q969S3 477 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 NIP7Q9Y221 180 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 LTBP3Q9NS15 1303 aa11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
NPIPB3-205ENST00000521589 CHL1O00533 1208 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 NPHP1O15259 732 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 PRELPP51888 382 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 MASTLQ96GX5 879 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 NMRK2Q9NPI5 230 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 ADAMTS8Q9UP79 889 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 KDM2BQ8NHM5 1336 aa11.52□□□□□ -0.57
NPIPB3-205ENST00000521589 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 TOMM70O94826 608 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 HSPA6P17066 643 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 PDIA6Q15084 440 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 PRPF40BQ6NWY9 871 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 KIF6Q6ZMV9 814 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 TTLL7Q6ZT98 887 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 RRP7AQ9Y3A4 280 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 FER1L6Q2WGJ9 1857 aa11.51□□□□□ -0.57
NPIPB3-205ENST00000521589 C21orf2O43822 256 aa11.5□□□□□ -0.57
NPIPB3-205ENST00000521589 MYL6BP14649 208 aa11.5□□□□□ -0.57
NPIPB3-205ENST00000521589 NPR1P16066 1061 aa11.5□□□□□ -0.57
NPIPB3-205ENST00000521589 CRY2Q49AN0 593 aa11.5□□□□□ -0.57
NPIPB3-205ENST00000521589 SOGA3Q5TF21 947 aa11.5□□□□□ -0.57
NPIPB3-205ENST00000521589 NYXQ9GZU5 481 aa11.5□□□□□ -0.57
NPIPB3-205ENST00000521589 SLX4Q8IY92 1834 aa11.5□□□□□ -0.57
NPIPB3-205ENST00000521589 NUP98P52948 1817 aa11.49□□□□□ -0.57
NPIPB3-205ENST00000521589 ZEB1P37275 1124 aaPredicted RBP11.49□□□□□ -0.57
NPIPB3-205ENST00000521589 GIGYF2Q6Y7W6 1299 aaKnown RBP11.49□□□□□ -0.57
NPIPB3-205ENST00000521589 ZNF34Q8IZ26 560 aa11.49□□□□□ -0.57
NPIPB3-205ENST00000521589 NGEFQ8N5V2 710 aa11.49□□□□□ -0.57
NPIPB3-205ENST00000521589 UBN2Q6ZU65 1347 aa11.49□□□□□ -0.57
NPIPB3-205ENST00000521589 ABCC12Q96J65 1359 aa11.49□□□□□ -0.57
NPIPB3-205ENST00000521589 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
NPIPB3-205ENST00000521589 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
NPIPB3-205ENST00000521589 HOXB7P09629 217 aa11.48□□□□□ -0.57
NPIPB3-205ENST00000521589 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
NPIPB3-205ENST00000521589 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
NPIPB3-205ENST00000521589 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
NPIPB3-205ENST00000521589 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
NPIPB3-205ENST00000521589 ZBTB3Q9H5J0 574 aa11.48□□□□□ -0.57
NPIPB3-205ENST00000521589 TIAM2Q8IVF5 1701 aa11.48□□□□□ -0.57
NPIPB3-205ENST00000521589 EIF2S2P20042 333 aaKnown RBP11.47□□□□□ -0.57
NPIPB3-205ENST00000521589 PARP10Q53GL7 1025 aa11.47□□□□□ -0.57
NPIPB3-205ENST00000521589 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
NPIPB3-205ENST00000521589 SNED1Q8TER0 1413 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 RNF123Q5XPI4 1314 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 FAM177BA6PVY3 158 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 NTSR2O95665 410 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 ZNF853P0CG23 659 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 GPTP24298 496 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 GTF2E1P29083 439 aaPredicted RBP11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 KRT24Q2M2I5 525 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 CCDC93Q567U6 631 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 SUSD4Q5VX71 490 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 NUTM1Q86Y26 1132 aa11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 DDX21Q9NR30 783 aaKnown RBP eCLIP11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.57
NPIPB3-205ENST00000521589 DICER1Q9UPY3 1922 aaKnown RBP11.46□□□□□ -0.58
NPIPB3-205ENST00000521589 CCDC88AQ3V6T2 1871 aa11.45□□□□□ -0.58
NPIPB3-205ENST00000521589 ANXA1P04083 346 aa11.45□□□□□ -0.58
NPIPB3-205ENST00000521589 VEGFAP15692 232 aaPredicted RBP11.45□□□□□ -0.58
NPIPB3-205ENST00000521589 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
NPIPB3-205ENST00000521589 FSTL1Q12841 308 aa11.45□□□□□ -0.58
NPIPB3-205ENST00000521589 ERFEQ4G0M1 354 aa11.45□□□□□ -0.58
NPIPB3-205ENST00000521589 RRAGCQ9HB90 399 aa11.45□□□□□ -0.58
NPIPB3-205ENST00000521589 CACNA1SQ13698 1873 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 WDR90Q96KV7 1748 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 APAF1O14727 1248 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 APLP1P51693 650 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 FKBP4Q02790 459 aaKnown RBP eCLIP11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 HSP90AB3PQ58FF7 597 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 SLC10A5Q5PT55 438 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 COPS6Q7L5N1 327 aa11.44□□□□□ -0.58
NPIPB3-205ENST00000521589 PPP1R42Q7Z4L9 355 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms