RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
R3HCC1-206ENST00000520480 ARHGAP27Q6ZUM4 889 aa18.76■□□□□ 0.59
R3HCC1-206ENST00000520480 C2CD5Q86YS7 1000 aa18.76■□□□□ 0.59
R3HCC1-206ENST00000520480 NGEFQ8N5V2 710 aa18.76■□□□□ 0.59
R3HCC1-206ENST00000520480 ANKRD31Q8N7Z5 1873 aa18.75■□□□□ 0.59
R3HCC1-206ENST00000520480 ERVV-1B6SEH8 477 aa18.75■□□□□ 0.59
R3HCC1-206ENST00000520480 ST5P78524 1137 aa18.75■□□□□ 0.59
R3HCC1-206ENST00000520480 CALD1Q05682 793 aaKnown RBP18.75■□□□□ 0.59
R3HCC1-206ENST00000520480 CCDC184Q52MB2 194 aa18.75■□□□□ 0.59
R3HCC1-206ENST00000520480 NBPF5PQ86XG9 351 aaPredicted RBP18.75■□□□□ 0.59
R3HCC1-206ENST00000520480 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
R3HCC1-206ENST00000520480 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
R3HCC1-206ENST00000520480 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
R3HCC1-206ENST00000520480 NIP7Q9Y221 180 aaKnown RBP eCLIP18.74■□□□□ 0.59
R3HCC1-206ENST00000520480 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
R3HCC1-206ENST00000520480 ADCY9O60503 1353 aa18.73■□□□□ 0.59
R3HCC1-206ENST00000520480 HLFQ16534 295 aa18.73■□□□□ 0.59
R3HCC1-206ENST00000520480 NUP98P52948 1817 aa18.72■□□□□ 0.59
R3HCC1-206ENST00000520480 TPTE2Q6XPS3 522 aa18.72■□□□□ 0.59
R3HCC1-206ENST00000520480 TTLL6Q8N841 843 aa18.72■□□□□ 0.59
R3HCC1-206ENST00000520480 ATP10DQ9P241 1426 aa18.72■□□□□ 0.59
R3HCC1-206ENST00000520480 HOXB7P09629 217 aa18.71■□□□□ 0.59
R3HCC1-206ENST00000520480 PDIA6Q15084 440 aa18.71■□□□□ 0.59
R3HCC1-206ENST00000520480 TTLL7Q6ZT98 887 aa18.71■□□□□ 0.59
R3HCC1-206ENST00000520480 CCDC24Q8N4L8 307 aa18.71■□□□□ 0.59
R3HCC1-206ENST00000520480 IFT57Q9NWB7 429 aa18.71■□□□□ 0.59
R3HCC1-206ENST00000520480 COL11A2P13942 1736 aaPredicted RBP18.7■□□□□ 0.58
R3HCC1-206ENST00000520480 GNAI1P63096 354 aa18.7■□□□□ 0.58
R3HCC1-206ENST00000520480 ZBTB3Q9H5J0 574 aa18.7■□□□□ 0.58
R3HCC1-206ENST00000520480 ZNF853P0CG23 659 aa18.69■□□□□ 0.58
R3HCC1-206ENST00000520480 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
R3HCC1-206ENST00000520480 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
R3HCC1-206ENST00000520480 ZNF622Q969S3 477 aaKnown RBP eCLIP18.69■□□□□ 0.58
R3HCC1-206ENST00000520480 MBIPQ9NS73 344 aa18.69■□□□□ 0.58
R3HCC1-206ENST00000520480 PROSER3Q2NL68 480 aa18.68■□□□□ 0.58
R3HCC1-206ENST00000520480 NECTIN2Q92692 538 aa18.68■□□□□ 0.58
R3HCC1-206ENST00000520480 NYXQ9GZU5 481 aa18.68■□□□□ 0.58
R3HCC1-206ENST00000520480 SRGNP10124 158 aa18.67■□□□□ 0.58
R3HCC1-206ENST00000520480 GTF2E1P29083 439 aaPredicted RBP18.67■□□□□ 0.58
R3HCC1-206ENST00000520480 HDGFL1Q5TGJ6 251 aa18.67■□□□□ 0.58
R3HCC1-206ENST00000520480 STYK1Q6J9G0 422 aa18.67■□□□□ 0.58
R3HCC1-206ENST00000520480 GIGYF2Q6Y7W6 1299 aaKnown RBP18.67■□□□□ 0.58
R3HCC1-206ENST00000520480 CNKSR1Q969H4 720 aa18.67■□□□□ 0.58
R3HCC1-206ENST00000520480 DDX21Q9NR30 783 aaKnown RBP eCLIP18.67■□□□□ 0.58
R3HCC1-206ENST00000520480 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
R3HCC1-206ENST00000520480 ANXA1P04083 346 aa18.66■□□□□ 0.58
R3HCC1-206ENST00000520480 CCDC27Q2M243 656 aa18.66■□□□□ 0.58
R3HCC1-206ENST00000520480 MASTLQ96GX5 879 aa18.66■□□□□ 0.58
R3HCC1-206ENST00000520480 GPBP1L1Q9HC44 474 aaPredicted RBP18.66■□□□□ 0.58
R3HCC1-206ENST00000520480 IBTKQ9P2D0 1353 aaPredicted RBP18.66■□□□□ 0.58
R3HCC1-206ENST00000520480 GPTP24298 496 aa18.65■□□□□ 0.58
R3HCC1-206ENST00000520480 DUSP27Q5VZP5 1158 aa18.65■□□□□ 0.58
R3HCC1-206ENST00000520480 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
R3HCC1-206ENST00000520480 KLRG2A4D1S0 409 aaPredicted RBP18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 C9orf131Q5VYM1 1079 aa18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 ZNF34Q8IZ26 560 aa18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 XAGE3Q8WTP9 111 aa18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 CHPF2Q9P2E5 772 aa18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 DBF4Q9UBU7 674 aaPredicted RBP18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 SBF1O95248 1867 aa18.64■□□□□ 0.57
R3HCC1-206ENST00000520480 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
R3HCC1-206ENST00000520480 NPR1P16066 1061 aa18.63■□□□□ 0.57
R3HCC1-206ENST00000520480 AIMP1Q12904 312 aaKnown RBP18.63■□□□□ 0.57
R3HCC1-206ENST00000520480 PARP10Q53GL7 1025 aa18.63■□□□□ 0.57
R3HCC1-206ENST00000520480 HSP90AB3PQ58FF7 597 aa18.63■□□□□ 0.57
R3HCC1-206ENST00000520480 UBN2Q6ZU65 1347 aa18.63■□□□□ 0.57
R3HCC1-206ENST00000520480 PRPF40BQ6NWY9 871 aaKnown RBP18.62■□□□□ 0.57
R3HCC1-206ENST00000520480 PPP1R42Q7Z4L9 355 aa18.62■□□□□ 0.57
R3HCC1-206ENST00000520480 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
R3HCC1-206ENST00000520480 CHMP4AQ9BY43 222 aa18.62■□□□□ 0.57
R3HCC1-206ENST00000520480 HYPKQ9NX55 129 aa18.62■□□□□ 0.57
R3HCC1-206ENST00000520480 RNF181Q9P0P0 153 aa18.62■□□□□ 0.57
R3HCC1-206ENST00000520480 ANKRD36CQ5JPF3 1778 aa18.62■□□□□ 0.57
R3HCC1-206ENST00000520480 CACNA1SQ13698 1873 aa18.62■□□□□ 0.57
R3HCC1-206ENST00000520480 SLX4Q8IY92 1834 aa18.61■□□□□ 0.57
R3HCC1-206ENST00000520480 C21orf2O43822 256 aa18.61■□□□□ 0.57
R3HCC1-206ENST00000520480 ERFEQ4G0M1 354 aa18.61■□□□□ 0.57
R3HCC1-206ENST00000520480 SOGA3Q5TF21 947 aa18.61■□□□□ 0.57
R3HCC1-206ENST00000520480 SUSD4Q5VX71 490 aa18.61■□□□□ 0.57
R3HCC1-206ENST00000520480 NUTM1Q86Y26 1132 aa18.61■□□□□ 0.57
R3HCC1-206ENST00000520480 RIC1Q4ADV7 1423 aa18.6■□□□□ 0.57
R3HCC1-206ENST00000520480 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
R3HCC1-206ENST00000520480 LMNB1P20700 586 aa18.6■□□□□ 0.57
R3HCC1-206ENST00000520480 RASSF7Q02833 373 aa18.6■□□□□ 0.57
R3HCC1-206ENST00000520480 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
R3HCC1-206ENST00000520480 TNRC6CQ9HCJ0 1690 aaKnown RBP18.6■□□□□ 0.57
R3HCC1-206ENST00000520480 FER1L6Q2WGJ9 1857 aa18.59■□□□□ 0.57
R3HCC1-206ENST00000520480 IL16Q14005 1332 aa18.59■□□□□ 0.57
R3HCC1-206ENST00000520480 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
R3HCC1-206ENST00000520480 NTSR2O95665 410 aa18.59■□□□□ 0.57
R3HCC1-206ENST00000520480 C1QTNF8P60827 252 aa18.59■□□□□ 0.57
R3HCC1-206ENST00000520480 CRY2Q49AN0 593 aa18.59■□□□□ 0.57
R3HCC1-206ENST00000520480 UTP14AQ9BVJ6 771 aaKnown RBP18.59■□□□□ 0.57
R3HCC1-206ENST00000520480 ZC3H4Q9UPT8 1303 aaKnown RBP18.58■□□□□ 0.57
R3HCC1-206ENST00000520480 SENP3-EIF4A1A0A087X0R7 540 aa18.58■□□□□ 0.56
R3HCC1-206ENST00000520480 NFKBIEO00221 500 aa18.58■□□□□ 0.56
R3HCC1-206ENST00000520480 ELL2O00472 640 aaPredicted RBP18.58■□□□□ 0.56
R3HCC1-206ENST00000520480 ALDH1B1P30837 517 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms