RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 DNMT3AQ9Y6K1 912 aaPredicted RBP11.39□□□□□ -0.59
PTPN12-213ENST00000519553 H3BM21 787 aa11.38□□□□□ -0.59
PTPN12-213ENST00000519553 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
PTPN12-213ENST00000519553 ZNF280CQ8ND82 737 aa11.38□□□□□ -0.59
PTPN12-213ENST00000519553 HELQQ8TDG4 1101 aa11.38□□□□□ -0.59
PTPN12-213ENST00000519553 SUSD3Q96L08 255 aa11.38□□□□□ -0.59
PTPN12-213ENST00000519553 NUCKS1Q9H1E3 243 aaKnown RBP11.38□□□□□ -0.59
PTPN12-213ENST00000519553 MTMR7Q9Y216 660 aa11.38□□□□□ -0.59
PTPN12-213ENST00000519553 H7C1W4 665 aa11.37□□□□□ -0.59
PTPN12-213ENST00000519553 FAM26DQ5JW98 314 aa11.37□□□□□ -0.59
PTPN12-213ENST00000519553 NLRP8Q86W28 1048 aa11.37□□□□□ -0.59
PTPN12-213ENST00000519553 KCTD17Q8N5Z5 321 aa11.37□□□□□ -0.59
PTPN12-213ENST00000519553 NANOS1Q8WY41 292 aaKnown RBP11.37□□□□□ -0.59
PTPN12-213ENST00000519553 GMCL1Q96IK5 515 aa11.37□□□□□ -0.59
PTPN12-213ENST00000519553 MTMR3Q13615 1198 aa11.36□□□□□ -0.59
PTPN12-213ENST00000519553 C11orf91Q3C1V1 193 aa11.36□□□□□ -0.59
PTPN12-213ENST00000519553 EFHC2Q5JST6 749 aa11.36□□□□□ -0.59
PTPN12-213ENST00000519553 LRRC69Q6ZNQ3 347 aa11.36□□□□□ -0.59
PTPN12-213ENST00000519553 AEBP1Q8IUX7 1158 aa11.36□□□□□ -0.59
PTPN12-213ENST00000519553 IVNS1ABPQ9Y6Y0 642 aa11.36□□□□□ -0.59
PTPN12-213ENST00000519553 TERTO14746 1132 aaKnown RBP11.35□□□□□ -0.59
PTPN12-213ENST00000519553 ZNF211Q13398 564 aaPredicted RBP11.35□□□□□ -0.59
PTPN12-213ENST00000519553 SAMD5Q5TGI4 173 aa11.35□□□□□ -0.59
PTPN12-213ENST00000519553 CCER1Q8TC90 406 aaPredicted RBP11.35□□□□□ -0.59
PTPN12-213ENST00000519553 EGFL7Q9UHF1 273 aa11.35□□□□□ -0.59
PTPN12-213ENST00000519553 TGFBR3LH3BV60 316 aa11.34□□□□□ -0.59
PTPN12-213ENST00000519553 ABL1P00519 1130 aa11.34□□□□□ -0.59
PTPN12-213ENST00000519553 HIF1AQ16665 826 aa11.34□□□□□ -0.59
PTPN12-213ENST00000519553 IER5Q5VY09 327 aa11.34□□□□□ -0.59
PTPN12-213ENST00000519553 ETFBKMTQ8IXQ9 262 aa11.34□□□□□ -0.59
PTPN12-213ENST00000519553 ZCCHC2Q9C0B9 1178 aaKnown RBP11.34□□□□□ -0.59
PTPN12-213ENST00000519553 DMGDHQ9UI17 866 aaKnown RBP11.34□□□□□ -0.59
PTPN12-213ENST00000519553 CDC14CA4D256 554 aa11.33□□□□□ -0.6
PTPN12-213ENST00000519553 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
PTPN12-213ENST00000519553 VWA5B2Q8N398 1253 aa11.33□□□□□ -0.6
PTPN12-213ENST00000519553 GTPBP3Q969Y2 492 aaKnown RBP11.33□□□□□ -0.6
PTPN12-213ENST00000519553 ANO2Q9NQ90 1003 aa11.33□□□□□ -0.6
PTPN12-213ENST00000519553 NDFIP2Q9NV92 336 aa11.33□□□□□ -0.6
PTPN12-213ENST00000519553 IFT43Q96FT9 208 aa11.32□□□□□ -0.6
PTPN12-213ENST00000519553 STIM2Q9P246 746 aa11.32□□□□□ -0.6
PTPN12-213ENST00000519553 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
PTPN12-213ENST00000519553 HCN2Q9UL51 889 aa11.32□□□□□ -0.6
PTPN12-213ENST00000519553 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
PTPN12-213ENST00000519553 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
PTPN12-213ENST00000519553 ICMTO60725 284 aa11.31□□□□□ -0.6
PTPN12-213ENST00000519553 TYRO3Q06418 890 aa11.31□□□□□ -0.6
PTPN12-213ENST00000519553 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
PTPN12-213ENST00000519553 FIGNL1Q6PIW4 674 aa11.31□□□□□ -0.6
PTPN12-213ENST00000519553 ERBB4Q15303 1308 aa11.31□□□□□ -0.6
PTPN12-213ENST00000519553 FAM157BP0CG42 384 aa11.3□□□□□ -0.6
PTPN12-213ENST00000519553 NPR3P17342 541 aa11.3□□□□□ -0.6
PTPN12-213ENST00000519553 BRD2P25440 801 aaKnown RBP11.3□□□□□ -0.6
PTPN12-213ENST00000519553 SF3B2Q13435 895 aaKnown RBP11.3□□□□□ -0.6
PTPN12-213ENST00000519553 LCE2CQ5TA81 110 aa11.3□□□□□ -0.6
PTPN12-213ENST00000519553 SV2AQ7L0J3 742 aa11.3□□□□□ -0.6
PTPN12-213ENST00000519553 BTLAQ7Z6A9 289 aa11.3□□□□□ -0.6
PTPN12-213ENST00000519553 NEUROD4Q9HD90 331 aa11.3□□□□□ -0.6
PTPN12-213ENST00000519553 PCDHGC4Q9Y5F7 938 aa11.3□□□□□ -0.6
PTPN12-213ENST00000519553 H3BRB1 525 aa11.29□□□□□ -0.6
PTPN12-213ENST00000519553 GPR25O00155 361 aa11.29□□□□□ -0.6
PTPN12-213ENST00000519553 ZBTB39O15060 712 aa11.29□□□□□ -0.6
PTPN12-213ENST00000519553 ATXN7O15265 892 aaPredicted RBP11.29□□□□□ -0.6
PTPN12-213ENST00000519553 EFSO43281 561 aa11.29□□□□□ -0.6
PTPN12-213ENST00000519553 BNIP3LO60238 219 aa11.29□□□□□ -0.6
PTPN12-213ENST00000519553 MPSTP25325 297 aa11.29□□□□□ -0.6
PTPN12-213ENST00000519553 ECM1Q16610 540 aa11.29□□□□□ -0.6
PTPN12-213ENST00000519553 GPR161Q8N6U8 529 aaKnown RBP11.29□□□□□ -0.6
PTPN12-213ENST00000519553 TUT1Q9H6E5 874 aaKnown RBP11.29□□□□□ -0.6
PTPN12-213ENST00000519553 DCDC2BA2VCK2 349 aa11.28□□□□□ -0.6
PTPN12-213ENST00000519553 SOWAHDA6NJG2 315 aa11.28□□□□□ -0.6
PTPN12-213ENST00000519553 MICAL2O94851 1124 aa11.28□□□□□ -0.6
PTPN12-213ENST00000519553 FKBP4Q02790 459 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPN12-213ENST00000519553 TREML1Q86YW5 311 aa11.28□□□□□ -0.6
PTPN12-213ENST00000519553 ZNF775Q96BV0 537 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-213ENST00000519553 ABHD17AQ96GS6 310 aa11.28□□□□□ -0.6
PTPN12-213ENST00000519553 IDH3AP50213 366 aa11.27□□□□□ -0.61
PTPN12-213ENST00000519553 TNP2Q05952 138 aa11.27□□□□□ -0.61
PTPN12-213ENST00000519553 ABTB2Q8N961 1025 aa11.27□□□□□ -0.61
PTPN12-213ENST00000519553 GRNP28799 593 aaKnown RBP11.26□□□□□ -0.61
PTPN12-213ENST00000519553 INPP5BP32019 993 aa11.26□□□□□ -0.61
PTPN12-213ENST00000519553 GAS6Q14393 721 aa11.26□□□□□ -0.61
PTPN12-213ENST00000519553 ATXN7L1Q9ULK2 861 aaPredicted RBP11.26□□□□□ -0.61
PTPN12-213ENST00000519553 OPLAHO14841 1288 aa11.25□□□□□ -0.61
PTPN12-213ENST00000519553 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
PTPN12-213ENST00000519553 MAPTP10636 758 aaKnown RBP11.25□□□□□ -0.61
PTPN12-213ENST00000519553 GLYCTKQ8IVS8 523 aa11.25□□□□□ -0.61
PTPN12-213ENST00000519553 SLC16A10Q8TF71 515 aa11.25□□□□□ -0.61
PTPN12-213ENST00000519553 CEP63Q96MT8 703 aa11.25□□□□□ -0.61
PTPN12-213ENST00000519553 CFHR5Q9BXR6 569 aa11.25□□□□□ -0.61
PTPN12-213ENST00000519553 BRD7Q9NPI1 651 aa11.25□□□□□ -0.61
PTPN12-213ENST00000519553 STRN4Q9NRL3 753 aa11.25□□□□□ -0.61
PTPN12-213ENST00000519553 ZAP70P43403 619 aa11.24□□□□□ -0.61
PTPN12-213ENST00000519553 EIF1AXP47813 144 aaKnown RBP11.24□□□□□ -0.61
PTPN12-213ENST00000519553 ARHGAP4P98171 946 aa11.24□□□□□ -0.61
PTPN12-213ENST00000519553 ATCAYQ86WG3 371 aa11.24□□□□□ -0.61
PTPN12-213ENST00000519553 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
PTPN12-213ENST00000519553 FAM13AO94988 1023 aa11.23□□□□□ -0.61
PTPN12-213ENST00000519553 ARSDP51689 593 aa11.23□□□□□ -0.61
PTPN12-213ENST00000519553 KCNQ4P56696 695 aa11.23□□□□□ -0.61
PTPN12-213ENST00000519553 FOXR1Q6PIV2 292 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms