RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 LMNB1P20700 586 aa20.79■□□□□ 0.92
MRPS28-204ENST00000519120 LMOD3Q0VAK6 560 aa20.79■□□□□ 0.92
MRPS28-204ENST00000519120 STYK1Q6J9G0 422 aa20.79■□□□□ 0.92
MRPS28-204ENST00000519120 ERBB4Q15303 1308 aa20.78■□□□□ 0.92
MRPS28-204ENST00000519120 NBPF5PQ86XG9 351 aaPredicted RBP20.78■□□□□ 0.92
MRPS28-204ENST00000519120 CNKSR1Q969H4 720 aa20.78■□□□□ 0.92
MRPS28-204ENST00000519120 ERVV-1B6SEH8 477 aa20.77■□□□□ 0.92
MRPS28-204ENST00000519120 SRGNP10124 158 aa20.77■□□□□ 0.92
MRPS28-204ENST00000519120 TMPOP42166 694 aaKnown RBP20.77■□□□□ 0.92
MRPS28-204ENST00000519120 RIPK4P57078 832 aa20.77■□□□□ 0.92
MRPS28-204ENST00000519120 RASSF7Q02833 373 aa20.77■□□□□ 0.92
MRPS28-204ENST00000519120 ZNF622Q969S3 477 aaKnown RBP eCLIP20.77■□□□□ 0.926e-8■□□□□ 10.3
MRPS28-204ENST00000519120 NMRK2Q9NPI5 230 aa20.77■□□□□ 0.92
MRPS28-204ENST00000519120 NIP7Q9Y221 180 aaKnown RBP eCLIP20.77■□□□□ 0.92
MRPS28-204ENST00000519120 KLRG2A4D1S0 409 aaPredicted RBP20.76■□□□□ 0.91
MRPS28-204ENST00000519120 NFKBIEO00221 500 aa20.76■□□□□ 0.91
MRPS28-204ENST00000519120 TPTE2Q6XPS3 522 aa20.76■□□□□ 0.91
MRPS28-204ENST00000519120 CCDC24Q8N4L8 307 aa20.76■□□□□ 0.91
MRPS28-204ENST00000519120 MASTLQ96GX5 879 aa20.76■□□□□ 0.91
MRPS28-204ENST00000519120 TNRC6CQ9HCJ0 1690 aaKnown RBP20.75■□□□□ 0.91
MRPS28-204ENST00000519120 TSPYL4Q9UJ04 414 aa20.75■□□□□ 0.91
MRPS28-204ENST00000519120 LTBP3Q9NS15 1303 aa20.75■□□□□ 0.91
MRPS28-204ENST00000519120 ARFGEF2Q9Y6D5 1785 aa20.74■□□□□ 0.91
MRPS28-204ENST00000519120 PRELPP51888 382 aa20.74■□□□□ 0.91
MRPS28-204ENST00000519120 SOGA3Q5TF21 947 aa20.74■□□□□ 0.91
MRPS28-204ENST00000519120 MAP3K15Q6ZN16 1313 aa20.74■□□□□ 0.91
MRPS28-204ENST00000519120 HLFQ16534 295 aa20.73■□□□□ 0.91
MRPS28-204ENST00000519120 RBM46Q8TBY0 533 aaKnown RBP20.73■□□□□ 0.91
MRPS28-204ENST00000519120 C21orf2O43822 256 aa20.72■□□□□ 0.91
MRPS28-204ENST00000519120 NPR1P16066 1061 aa20.72■□□□□ 0.91
MRPS28-204ENST00000519120 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
MRPS28-204ENST00000519120 PRPF40BQ6NWY9 871 aaKnown RBP20.72■□□□□ 0.91
MRPS28-204ENST00000519120 KIF6Q6ZMV9 814 aa20.72■□□□□ 0.91
MRPS28-204ENST00000519120 RUNDC1Q96C34 613 aa20.72■□□□□ 0.91
MRPS28-204ENST00000519120 RRP7AQ9Y3A4 280 aaKnown RBP20.72■□□□□ 0.91
MRPS28-204ENST00000519120 IBTKQ9P2D0 1353 aaPredicted RBP20.72■□□□□ 0.91
MRPS28-204ENST00000519120 FER1L6Q2WGJ9 1857 aa20.71■□□□□ 0.91
MRPS28-204ENST00000519120 NYXQ9GZU5 481 aa20.71■□□□□ 0.91
MRPS28-204ENST00000519120 PRKRIP1Q9H875 184 aaPredicted RBP20.71■□□□□ 0.91
MRPS28-204ENST00000519120 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
MRPS28-204ENST00000519120 TIAM2Q8IVF5 1701 aa20.7■□□□□ 0.9
MRPS28-204ENST00000519120 GLTPD2A6NH11 291 aa20.7■□□□□ 0.9
MRPS28-204ENST00000519120 C16orf71Q8IYS4 520 aaPredicted RBP20.7■□□□□ 0.9
MRPS28-204ENST00000519120 CEP350Q5VT06 3117 aa20.7■□□□□ 0.9
MRPS28-204ENST00000519120 FSTL1Q12841 308 aa20.69■□□□□ 0.9
MRPS28-204ENST00000519120 TTLL7Q6ZT98 887 aa20.69■□□□□ 0.9
MRPS28-204ENST00000519120 C7orf43Q8WVR3 580 aa20.69■□□□□ 0.9
MRPS28-204ENST00000519120 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
MRPS28-204ENST00000519120 SLX4Q8IY92 1834 aa20.69■□□□□ 0.9
MRPS28-204ENST00000519120 MYL6BP14649 208 aa20.68■□□□□ 0.9
MRPS28-204ENST00000519120 APLP1P51693 650 aa20.68■□□□□ 0.9
MRPS28-204ENST00000519120 LRP10Q7Z4F1 713 aa20.68■□□□□ 0.9
MRPS28-204ENST00000519120 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
MRPS28-204ENST00000519120 RRAGCQ9HB90 399 aa20.68■□□□□ 0.9
MRPS28-204ENST00000519120 NUP98P52948 1817 aa20.67■□□□□ 0.9
MRPS28-204ENST00000519120 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
MRPS28-204ENST00000519120 GIGYF2Q6Y7W6 1299 aaKnown RBP20.67■□□□□ 0.9
MRPS28-204ENST00000519120 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
MRPS28-204ENST00000519120 CHL1O00533 1208 aa20.66■□□□□ 0.9
MRPS28-204ENST00000519120 ALDH1B1P30837 517 aa20.66■□□□□ 0.9
MRPS28-204ENST00000519120 PDIA6Q15084 440 aa20.66■□□□□ 0.9
MRPS28-204ENST00000519120 CRY2Q49AN0 593 aa20.66■□□□□ 0.9
MRPS28-204ENST00000519120 CCDC93Q567U6 631 aa20.66■□□□□ 0.9
MRPS28-204ENST00000519120 ZNF34Q8IZ26 560 aa20.66■□□□□ 0.9
MRPS28-204ENST00000519120 ZNF219Q9P2Y4 722 aaPredicted RBP20.66■□□□□ 0.9
MRPS28-204ENST00000519120 ADAMTS8Q9UP79 889 aa20.66■□□□□ 0.9
MRPS28-204ENST00000519120 TRIM35Q9UPQ4 493 aa20.66■□□□□ 0.9
MRPS28-204ENST00000519120 DICER1Q9UPY3 1922 aaKnown RBP20.66■□□□□ 0.9
MRPS28-204ENST00000519120 VEGFAP15692 232 aaPredicted RBP20.65■□□□□ 0.9
MRPS28-204ENST00000519120 ERFEQ4G0M1 354 aa20.65■□□□□ 0.9
MRPS28-204ENST00000519120 DPY19L2Q6NUT2 758 aa20.65■□□□□ 0.9
MRPS28-204ENST00000519120 ZBTB3Q9H5J0 574 aa20.65■□□□□ 0.9
MRPS28-204ENST00000519120 CCDC88AQ3V6T2 1871 aa20.64■□□□□ 0.9
MRPS28-204ENST00000519120 ABCC12Q96J65 1359 aa20.64■□□□□ 0.89
MRPS28-204ENST00000519120 UBN2Q6ZU65 1347 aa20.64■□□□□ 0.89
MRPS28-204ENST00000519120 FAM177BA6PVY3 158 aa20.64■□□□□ 0.89
MRPS28-204ENST00000519120 PARP10Q53GL7 1025 aa20.64■□□□□ 0.89
MRPS28-204ENST00000519120 CACNA1SQ13698 1873 aa20.64■□□□□ 0.89
MRPS28-204ENST00000519120 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
MRPS28-204ENST00000519120 NEUROD2Q15784 382 aa20.63■□□□□ 0.89
MRPS28-204ENST00000519120 WDR90Q96KV7 1748 aa20.63■□□□□ 0.89
MRPS28-204ENST00000519120 HOXB7P09629 217 aa20.62■□□□□ 0.89
MRPS28-204ENST00000519120 RTKN2Q8IZC4 609 aa20.62■□□□□ 0.89
MRPS28-204ENST00000519120 RNF123Q5XPI4 1314 aa20.61■□□□□ 0.89
MRPS28-204ENST00000519120 NTSR2O95665 410 aa20.61■□□□□ 0.89
MRPS28-204ENST00000519120 GPTP24298 496 aa20.61■□□□□ 0.89
MRPS28-204ENST00000519120 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
MRPS28-204ENST00000519120 FKBP4Q02790 459 aaKnown RBP eCLIP20.61■□□□□ 0.89
MRPS28-204ENST00000519120 SUSD4Q5VX71 490 aa20.61■□□□□ 0.89
MRPS28-204ENST00000519120 PPP1R42Q7Z4L9 355 aa20.61■□□□□ 0.89
MRPS28-204ENST00000519120 NUTM1Q86Y26 1132 aa20.61■□□□□ 0.89
MRPS28-204ENST00000519120 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
MRPS28-204ENST00000519120 DDX21Q9NR30 783 aaKnown RBP eCLIP20.61■□□□□ 0.89
MRPS28-204ENST00000519120 PROSER3Q2NL68 480 aa20.6■□□□□ 0.89
MRPS28-204ENST00000519120 HSP90AB3PQ58FF7 597 aa20.6■□□□□ 0.89
MRPS28-204ENST00000519120 CC2D2BQ6DHV5 1058 aa20.6■□□□□ 0.89
MRPS28-204ENST00000519120 CFAP44Q96MT7 982 aa20.6■□□□□ 0.89
MRPS28-204ENST00000519120 SNED1Q8TER0 1413 aa20.59■□□□□ 0.89
MRPS28-204ENST00000519120 ZEB1P37275 1124 aaPredicted RBP20.58■□□□□ 0.89
MRPS28-204ENST00000519120 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms