RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CNTNAP3Q9BZ76 1288 aa6.79□□□□□ -1.32
VPS13B-207ENST00000518569 SEPT3Q9UH03 358 aa6.79□□□□□ -1.32
VPS13B-207ENST00000518569 C11orf91Q3C1V1 193 aa6.78□□□□□ -1.32
VPS13B-207ENST00000518569 COX20Q5RI15 118 aa6.78□□□□□ -1.32
VPS13B-207ENST00000518569 NLRP8Q86W28 1048 aa6.78□□□□□ -1.32
VPS13B-207ENST00000518569 PGBD3Q8N328 593 aa6.78□□□□□ -1.32
VPS13B-207ENST00000518569 RHPN1Q8TCX5 695 aa6.78□□□□□ -1.32
VPS13B-207ENST00000518569 HELQQ8TDG4 1101 aa6.78□□□□□ -1.32
VPS13B-207ENST00000518569 NGLY1Q96IV0 654 aa6.78□□□□□ -1.32
VPS13B-207ENST00000518569 GAS2L1Q99501 681 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-207ENST00000518569 ANKIB1Q9P2G1 1089 aa6.78□□□□□ -1.32
VPS13B-207ENST00000518569 SCNN1AP37088 669 aa6.77□□□□□ -1.33
VPS13B-207ENST00000518569 SF3B2Q13435 895 aaKnown RBP6.77□□□□□ -1.33
VPS13B-207ENST00000518569 NAA30Q147X3 362 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-207ENST00000518569 EFHC2Q5JST6 749 aa6.77□□□□□ -1.33
VPS13B-207ENST00000518569 BICDL1Q6ZP65 573 aa6.77□□□□□ -1.33
VPS13B-207ENST00000518569 TRIM22Q8IYM9 498 aa6.77□□□□□ -1.33
VPS13B-207ENST00000518569 GTF3C2Q8WUA4 911 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-207ENST00000518569 SAP130Q9H0E3 1048 aa6.77□□□□□ -1.33
VPS13B-207ENST00000518569 LRFN2Q9ULH4 789 aa6.77□□□□□ -1.33
VPS13B-207ENST00000518569 A0A1W2PNR3 127 aa6.76□□□□□ -1.33
VPS13B-207ENST00000518569 NPR3P17342 541 aa6.76□□□□□ -1.33
VPS13B-207ENST00000518569 ITGA6P23229 1130 aa6.76□□□□□ -1.33
VPS13B-207ENST00000518569 BRD2P25440 801 aaKnown RBP6.76□□□□□ -1.33
VPS13B-207ENST00000518569 ARSJQ5FYB0 599 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-207ENST00000518569 IER5Q5VY09 327 aa6.76□□□□□ -1.33
VPS13B-207ENST00000518569 GPR161Q8N6U8 529 aaKnown RBP6.76□□□□□ -1.33
VPS13B-207ENST00000518569 COL25A1Q9BXS0 654 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-207ENST00000518569 GPAMQ9HCL2 828 aa6.76□□□□□ -1.33
VPS13B-207ENST00000518569 NEUROD4Q9HD90 331 aa6.76□□□□□ -1.33
VPS13B-207ENST00000518569 IVNS1ABPQ9Y6Y0 642 aa6.76□□□□□ -1.33
VPS13B-207ENST00000518569 SERPINB4P48594 390 aa6.75□□□□□ -1.33
VPS13B-207ENST00000518569 FKBP4Q02790 459 aaKnown RBP eCLIP6.75□□□□□ -1.33
VPS13B-207ENST00000518569 SAMD5Q5TGI4 173 aa6.75□□□□□ -1.33
VPS13B-207ENST00000518569 FIGNL1Q6PIW4 674 aa6.75□□□□□ -1.33
VPS13B-207ENST00000518569 RIPOR1Q6ZS17 1223 aa6.75□□□□□ -1.33
VPS13B-207ENST00000518569 ABTB2Q8N961 1025 aa6.75□□□□□ -1.33
VPS13B-207ENST00000518569 NANOS1Q8WY41 292 aaKnown RBP6.75□□□□□ -1.33
VPS13B-207ENST00000518569 SUSD3Q96L08 255 aa6.75□□□□□ -1.33
VPS13B-207ENST00000518569 RUBCNLQ9H714 662 aa6.75□□□□□ -1.33
VPS13B-207ENST00000518569 STIM2Q9P246 746 aa6.75□□□□□ -1.33
VPS13B-207ENST00000518569 DNMT3AQ9Y6K1 912 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-207ENST00000518569 ZBTB7CA1YPR0 619 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 TGFBR3LH3BV60 316 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 TNFRSF10BO14763 440 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 ICMTO60725 284 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 KRT76Q01546 638 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 DGKZQ13574 1117 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 DBN1Q16643 649 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 VWA5B2Q8N398 1253 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 SVOPQ8N4V2 548 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 NUCKS1Q9H1E3 243 aaKnown RBP6.74□□□□□ -1.33
VPS13B-207ENST00000518569 KLK14Q9P0G3 267 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 GJA3Q9Y6H8 435 aa6.74□□□□□ -1.33
VPS13B-207ENST00000518569 SOWAHDA6NJG2 315 aa6.73□□□□□ -1.33
VPS13B-207ENST00000518569 FAM13AO94988 1023 aa6.73□□□□□ -1.33
VPS13B-207ENST00000518569 ABL1P00519 1130 aa6.73□□□□□ -1.33
VPS13B-207ENST00000518569 THBS1P07996 1170 aa6.73□□□□□ -1.33
VPS13B-207ENST00000518569 UBAP2LQ14157 1087 aaKnown RBP6.73□□□□□ -1.33
VPS13B-207ENST00000518569 SV2AQ7L0J3 742 aa6.73□□□□□ -1.33
VPS13B-207ENST00000518569 IFT43Q96FT9 208 aa6.73□□□□□ -1.33
VPS13B-207ENST00000518569 CUEDC1Q9NWM3 386 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-207ENST00000518569 BCS1LQ9Y276 419 aa6.73□□□□□ -1.33
VPS13B-207ENST00000518569 LRRC69Q6ZNQ3 347 aa6.72□□□□□ -1.33
VPS13B-207ENST00000518569 ZNF837Q96EG3 531 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-207ENST00000518569 ZCCHC2Q9C0B9 1178 aaKnown RBP6.72□□□□□ -1.33
VPS13B-207ENST00000518569 DMGDHQ9UI17 866 aaKnown RBP6.72□□□□□ -1.33
VPS13B-207ENST00000518569 PCDHGC4Q9Y5F7 938 aa6.72□□□□□ -1.33
VPS13B-207ENST00000518569 RNF225M0QZC1 329 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-207ENST00000518569 MICAL2O94851 1124 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 FAM157BP0CG42 384 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 ZNF211Q13398 564 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-207ENST00000518569 RNFT1Q5M7Z0 435 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 ALKBH2Q6NS38 261 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 FOXR1Q6PIV2 292 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 BTLAQ7Z6A9 289 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 ETFBKMTQ8IXQ9 262 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 ZNF280CQ8ND82 737 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 KLRG1Q96E93 195 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 HSH2DQ96JZ2 352 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 CFHR5Q9BXR6 569 aa6.71□□□□□ -1.34
VPS13B-207ENST00000518569 H3BRB1 525 aa6.7□□□□□ -1.34
VPS13B-207ENST00000518569 ATXN7O15265 892 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-207ENST00000518569 LAMC2Q13753 1193 aa6.7□□□□□ -1.34
VPS13B-207ENST00000518569 NOM1Q5C9Z4 860 aaKnown RBP6.7□□□□□ -1.34
VPS13B-207ENST00000518569 TREML1Q86YW5 311 aa6.7□□□□□ -1.34
VPS13B-207ENST00000518569 GLYCTKQ8IVS8 523 aa6.7□□□□□ -1.34
VPS13B-207ENST00000518569 TUT1Q9H6E5 874 aaKnown RBP6.7□□□□□ -1.34
VPS13B-207ENST00000518569 C11orf16Q9NQ32 467 aa6.7□□□□□ -1.34
VPS13B-207ENST00000518569 NDFIP2Q9NV92 336 aa6.7□□□□□ -1.34
VPS13B-207ENST00000518569 FAM13BQ9NYF5 915 aa6.7□□□□□ -1.34
VPS13B-207ENST00000518569 PHF24Q9UPV7 400 aa6.7□□□□□ -1.34
VPS13B-207ENST00000518569 MPSTP25325 297 aa6.69□□□□□ -1.34
VPS13B-207ENST00000518569 KCNQ4P56696 695 aa6.69□□□□□ -1.34
VPS13B-207ENST00000518569 TYRO3Q06418 890 aa6.69□□□□□ -1.34
VPS13B-207ENST00000518569 MTMR3Q13615 1198 aa6.69□□□□□ -1.34
VPS13B-207ENST00000518569 ECM1Q16610 540 aa6.69□□□□□ -1.34
VPS13B-207ENST00000518569 FAM26DQ5JW98 314 aa6.69□□□□□ -1.34
VPS13B-207ENST00000518569 TRERF1Q96PN7 1200 aa6.69□□□□□ -1.34
VPS13B-207ENST00000518569 ANO2Q9NQ90 1003 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms