RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 RPS6KA4O75676 772 aa16.68■□□□□ 0.26
PABPC1-205ENST00000518196 ZNF428Q96B54 188 aa16.68■□□□□ 0.26
PABPC1-205ENST00000518196 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
PABPC1-205ENST00000518196 TFCP2L1Q9NZI6 479 aa16.68■□□□□ 0.26
PABPC1-205ENST00000518196 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
PABPC1-205ENST00000518196 SLC15A2Q16348 729 aa16.67■□□□□ 0.26
PABPC1-205ENST00000518196 DBF4Q9UBU7 674 aaPredicted RBP16.67■□□□□ 0.26
PABPC1-205ENST00000518196 TAOK2Q9UL54 1235 aa16.67■□□□□ 0.26
PABPC1-205ENST00000518196 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
PABPC1-205ENST00000518196 CACNA1FO60840 1977 aa16.67■□□□□ 0.26
PABPC1-205ENST00000518196 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
PABPC1-205ENST00000518196 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
PABPC1-205ENST00000518196 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
PABPC1-205ENST00000518196 HS6ST3Q8IZP7 471 aa16.66■□□□□ 0.26
PABPC1-205ENST00000518196 FLAD1Q8NFF5 587 aa16.66■□□□□ 0.26
PABPC1-205ENST00000518196 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
PABPC1-205ENST00000518196 MYL6BP14649 208 aa16.65■□□□□ 0.26
PABPC1-205ENST00000518196 PIP4K2AP48426 406 aaPredicted RBP16.65■□□□□ 0.26
PABPC1-205ENST00000518196 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
PABPC1-205ENST00000518196 CHPF2Q9P2E5 772 aa16.65■□□□□ 0.26
PABPC1-205ENST00000518196 ZNF330Q9Y3S2 320 aaPredicted RBP16.65■□□□□ 0.26
PABPC1-205ENST00000518196 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
PABPC1-205ENST00000518196 A0A087WZG4 1122 aa16.64■□□□□ 0.25
PABPC1-205ENST00000518196 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
PABPC1-205ENST00000518196 SSFA2P28290 1259 aa16.64■□□□□ 0.25
PABPC1-205ENST00000518196 EIF5P55010 431 aaKnown RBP16.64■□□□□ 0.25
PABPC1-205ENST00000518196 PDIA6Q15084 440 aa16.64■□□□□ 0.25
PABPC1-205ENST00000518196 ALDH1L2Q3SY69 923 aa16.64■□□□□ 0.25
PABPC1-205ENST00000518196 TRAPPC3LQ5T215 181 aa16.64■□□□□ 0.25
PABPC1-205ENST00000518196 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
PABPC1-205ENST00000518196 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
PABPC1-205ENST00000518196 HYPKQ9NX55 129 aa16.64■□□□□ 0.25
PABPC1-205ENST00000518196 STK25O00506 426 aa16.63■□□□□ 0.25
PABPC1-205ENST00000518196 PHF14O94880 888 aa16.63■□□□□ 0.25
PABPC1-205ENST00000518196 CD44P16070 742 aaKnown RBP16.63■□□□□ 0.25
PABPC1-205ENST00000518196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.62■□□□□ 0.25
PABPC1-205ENST00000518196 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
PABPC1-205ENST00000518196 ANXA1P04083 346 aa16.62■□□□□ 0.25
PABPC1-205ENST00000518196 ARXQ96QS3 562 aa16.62■□□□□ 0.25
PABPC1-205ENST00000518196 COL15A1P39059 1388 aa16.62■□□□□ 0.25
PABPC1-205ENST00000518196 QSER1Q2KHR3 1735 aa16.62■□□□□ 0.25
PABPC1-205ENST00000518196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.61■□□□□ 0.25
PABPC1-205ENST00000518196 RFC4P35249 363 aa16.61■□□□□ 0.25
PABPC1-205ENST00000518196 PROSER3Q2NL68 480 aa16.61■□□□□ 0.25
PABPC1-205ENST00000518196 ARHGEF1Q92888 912 aaKnown RBP16.61■□□□□ 0.25
PABPC1-205ENST00000518196 ZFP91Q96JP5 570 aaPredicted RBP16.61■□□□□ 0.25
PABPC1-205ENST00000518196 TUBGCP6Q96RT7 1819 aa16.61■□□□□ 0.25
PABPC1-205ENST00000518196 RARSP54136 660 aaKnown RBP16.6■□□□□ 0.25
PABPC1-205ENST00000518196 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
PABPC1-205ENST00000518196 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
PABPC1-205ENST00000518196 PCDHB8Q9UN66 801 aa16.6■□□□□ 0.25
PABPC1-205ENST00000518196 PCDHB13Q9Y5F0 798 aa16.6■□□□□ 0.25
PABPC1-205ENST00000518196 ZPR1O75312 459 aa16.59■□□□□ 0.25
PABPC1-205ENST00000518196 AIMP1Q12904 312 aaKnown RBP16.59■□□□□ 0.25
PABPC1-205ENST00000518196 R3HDM1Q15032 1099 aaKnown RBP16.59■□□□□ 0.25
PABPC1-205ENST00000518196 KIF6Q6ZMV9 814 aa16.59■□□□□ 0.25
PABPC1-205ENST00000518196 SMIM5Q71RC9 77 aa16.59■□□□□ 0.25
PABPC1-205ENST00000518196 COPS6Q7L5N1 327 aa16.59■□□□□ 0.25
PABPC1-205ENST00000518196 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
PABPC1-205ENST00000518196 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
PABPC1-205ENST00000518196 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
PABPC1-205ENST00000518196 XAGE3Q8WTP9 111 aa16.59■□□□□ 0.25
PABPC1-205ENST00000518196 PNPLA7Q6ZV29 1317 aa16.59■□□□□ 0.25
PABPC1-205ENST00000518196 DDX58O95786 925 aaKnown RBP16.58■□□□□ 0.24
PABPC1-205ENST00000518196 LRP10Q7Z4F1 713 aa16.58■□□□□ 0.24
PABPC1-205ENST00000518196 COL23A1Q86Y22 540 aaPredicted RBP16.58■□□□□ 0.24
PABPC1-205ENST00000518196 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
PABPC1-205ENST00000518196 NARFQ9UHQ1 456 aa16.58■□□□□ 0.24
PABPC1-205ENST00000518196 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
PABPC1-205ENST00000518196 TTLL7Q6ZT98 887 aa16.57■□□□□ 0.24
PABPC1-205ENST00000518196 BCL2L13Q9BXK5 485 aa16.57■□□□□ 0.24
PABPC1-205ENST00000518196 RCAN3Q9UKA8 241 aa16.57■□□□□ 0.24
PABPC1-205ENST00000518196 BRPF1P55201 1214 aaPredicted RBP16.56■□□□□ 0.24
PABPC1-205ENST00000518196 FLIIQ13045 1269 aa16.56■□□□□ 0.24
PABPC1-205ENST00000518196 ZNF467Q7Z7K2 595 aaPredicted RBP16.56■□□□□ 0.24
PABPC1-205ENST00000518196 STK24Q9Y6E0 443 aa16.56■□□□□ 0.24
PABPC1-205ENST00000518196 MAP3K15Q6ZN16 1313 aa16.55■□□□□ 0.24
PABPC1-205ENST00000518196 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
PABPC1-205ENST00000518196 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
PABPC1-205ENST00000518196 ERVV-1B6SEH8 477 aa16.55■□□□□ 0.24
PABPC1-205ENST00000518196 FKBP5Q13451 457 aaPredicted RBP16.55■□□□□ 0.24
PABPC1-205ENST00000518196 ANKRD13DQ6ZTN6 518 aa16.55■□□□□ 0.24
PABPC1-205ENST00000518196 G2E3Q7L622 706 aa16.55■□□□□ 0.24
PABPC1-205ENST00000518196 PLBD2Q8NHP8 589 aa16.55■□□□□ 0.24
PABPC1-205ENST00000518196 SLC16A10Q8TF71 515 aa16.55■□□□□ 0.24
PABPC1-205ENST00000518196 ZNF652Q9Y2D9 606 aa16.55■□□□□ 0.24
PABPC1-205ENST00000518196 C4AP0C0L4 1744 aa16.55■□□□□ 0.24
PABPC1-205ENST00000518196 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
PABPC1-205ENST00000518196 BCAR3O75815 825 aa16.54■□□□□ 0.24
PABPC1-205ENST00000518196 USPL1Q5W0Q7 1092 aa16.54■□□□□ 0.24
PABPC1-205ENST00000518196 RIC3Q7Z5B4 369 aa16.54■□□□□ 0.24
PABPC1-205ENST00000518196 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
PABPC1-205ENST00000518196 SRP68Q9UHB9 627 aaKnown RBP16.54■□□□□ 0.24
PABPC1-205ENST00000518196 PTPRCP08575 1304 aa16.53■□□□□ 0.24
PABPC1-205ENST00000518196 IPO8O15397 1037 aaKnown RBP16.53■□□□□ 0.24
PABPC1-205ENST00000518196 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
PABPC1-205ENST00000518196 CLEC4GQ6UXB4 293 aa16.53■□□□□ 0.24
PABPC1-205ENST00000518196 SPRYD3Q8NCJ5 442 aa16.53■□□□□ 0.24
PABPC1-205ENST00000518196 PHF12Q96QT6 1004 aa16.53■□□□□ 0.24
PABPC1-205ENST00000518196 NUP98P52948 1817 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms