RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 PXDNLA1KZ92 1463 aa14.35□□□□□ -0.11
TRIM55-205ENST00000517647 NEUROD2Q15784 382 aa14.34□□□□□ -0.11
TRIM55-205ENST00000517647 LRP10Q7Z4F1 713 aa14.34□□□□□ -0.11
TRIM55-205ENST00000517647 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
TRIM55-205ENST00000517647 PDZRN3Q9UPQ7 1066 aa14.34□□□□□ -0.11
TRIM55-205ENST00000517647 CHD4Q14839 1912 aa14.33□□□□□ -0.11
TRIM55-205ENST00000517647 GNAI1P63096 354 aa14.33□□□□□ -0.12
TRIM55-205ENST00000517647 TBC1D2BQ9UPU7 963 aa14.33□□□□□ -0.12
TRIM55-205ENST00000517647 ZNF652Q9Y2D9 606 aa14.33□□□□□ -0.12
TRIM55-205ENST00000517647 IL16Q14005 1332 aa14.33□□□□□ -0.12
TRIM55-205ENST00000517647 GOLGB1Q14789 3259 aaKnown RBP14.33□□□□□ -0.12
TRIM55-205ENST00000517647 CARMIL3Q8ND23 1372 aa14.33□□□□□ -0.12
TRIM55-205ENST00000517647 SERPINB2P05120 415 aa14.32□□□□□ -0.12
TRIM55-205ENST00000517647 PDIA6Q15084 440 aa14.32□□□□□ -0.12
TRIM55-205ENST00000517647 GPR162Q16538 588 aa14.32□□□□□ -0.12
TRIM55-205ENST00000517647 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
TRIM55-205ENST00000517647 CHMP4AQ9BY43 222 aa14.32□□□□□ -0.12
TRIM55-205ENST00000517647 AFDNP55196 1824 aaKnown RBP14.31□□□□□ -0.12
TRIM55-205ENST00000517647 BRCA1P38398 1863 aaKnown RBP14.31□□□□□ -0.12
TRIM55-205ENST00000517647 YBX3P16989 372 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRIM55-205ENST00000517647 KCNA3P22001 575 aa14.31□□□□□ -0.12
TRIM55-205ENST00000517647 TBC1D9BQ66K14 1250 aa14.31□□□□□ -0.12
TRIM55-205ENST00000517647 WWC1Q8IX03 1113 aa14.3□□□□□ -0.12
TRIM55-205ENST00000517647 SETDB2Q96T68 719 aa14.3□□□□□ -0.12
TRIM55-205ENST00000517647 MBIPQ9NS73 344 aa14.3□□□□□ -0.12
TRIM55-205ENST00000517647 MAP3K15Q6ZN16 1313 aa14.3□□□□□ -0.12
TRIM55-205ENST00000517647 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
TRIM55-205ENST00000517647 BRIP1Q9BX63 1249 aa14.29□□□□□ -0.12
TRIM55-205ENST00000517647 DDX21Q9NR30 783 aaKnown RBP eCLIP14.29□□□□□ -0.12
TRIM55-205ENST00000517647 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
TRIM55-205ENST00000517647 DPEP1P16444 411 aa14.28□□□□□ -0.12
TRIM55-205ENST00000517647 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
TRIM55-205ENST00000517647 GIGYF2Q6Y7W6 1299 aaKnown RBP14.28□□□□□ -0.12
TRIM55-205ENST00000517647 WDR63Q8IWG1 891 aa14.28□□□□□ -0.12
TRIM55-205ENST00000517647 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
TRIM55-205ENST00000517647 ZNF330Q9Y3S2 320 aaPredicted RBP14.28□□□□□ -0.12
TRIM55-205ENST00000517647 A0A0G2JLW4 131 aa14.27□□□□□ -0.13
TRIM55-205ENST00000517647 KLRG2A4D1S0 409 aaPredicted RBP14.27□□□□□ -0.13
TRIM55-205ENST00000517647 PRR5LQ6MZQ0 368 aa14.27□□□□□ -0.13
TRIM55-205ENST00000517647 PIM2Q9P1W9 311 aa14.27□□□□□ -0.13
TRIM55-205ENST00000517647 ARFGEF1Q9Y6D6 1849 aa14.27□□□□□ -0.13
TRIM55-205ENST00000517647 RIC1Q4ADV7 1423 aa14.26□□□□□ -0.13
TRIM55-205ENST00000517647 YY1P25490 414 aa14.26□□□□□ -0.13
TRIM55-205ENST00000517647 PDE6BP35913 854 aa14.26□□□□□ -0.13
TRIM55-205ENST00000517647 DUSP27Q5VZP5 1158 aa14.26□□□□□ -0.13
TRIM55-205ENST00000517647 KIF6Q6ZMV9 814 aa14.26□□□□□ -0.13
TRIM55-205ENST00000517647 DBF4Q9UBU7 674 aaPredicted RBP14.26□□□□□ -0.13
TRIM55-205ENST00000517647 N4BP2Q86UW6 1770 aaPredicted RBP14.26□□□□□ -0.13
TRIM55-205ENST00000517647 DLEC1Q9Y238 1755 aa14.26□□□□□ -0.13
TRIM55-205ENST00000517647 NUP98P52948 1817 aa14.25□□□□□ -0.13
TRIM55-205ENST00000517647 HLFQ16534 295 aa14.25□□□□□ -0.13
TRIM55-205ENST00000517647 TPTE2Q6XPS3 522 aa14.25□□□□□ -0.13
TRIM55-205ENST00000517647 TTLL7Q6ZT98 887 aa14.25□□□□□ -0.13
TRIM55-205ENST00000517647 ZNF34Q8IZ26 560 aa14.25□□□□□ -0.13
TRIM55-205ENST00000517647 CNBD1Q8NA66 436 aa14.25□□□□□ -0.13
TRIM55-205ENST00000517647 LAS1LQ9Y4W2 734 aaKnown RBP14.25□□□□□ -0.13
TRIM55-205ENST00000517647 RNF123Q5XPI4 1314 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 MYL6BP14649 208 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 EIF2S2P20042 333 aaKnown RBP14.24□□□□□ -0.13
TRIM55-205ENST00000517647 KRT24Q2M2I5 525 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 HDGFL1Q5TGJ6 251 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 NYXQ9GZU5 481 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 HYPKQ9NX55 129 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 NIP7Q9Y221 180 aaKnown RBP eCLIP14.24□□□□□ -0.13
TRIM55-205ENST00000517647 ANKRD31Q8N7Z5 1873 aa14.24□□□□□ -0.13
TRIM55-205ENST00000517647 H0YIN7 160 aa14.23□□□□□ -0.13
TRIM55-205ENST00000517647 ST5P78524 1137 aa14.23□□□□□ -0.13
TRIM55-205ENST00000517647 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
TRIM55-205ENST00000517647 HSP90AB3PQ58FF7 597 aa14.23□□□□□ -0.13
TRIM55-205ENST00000517647 DALRD3Q5D0E6 543 aaKnown RBP14.23□□□□□ -0.13
TRIM55-205ENST00000517647 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
TRIM55-205ENST00000517647 STYK1Q6J9G0 422 aa14.22□□□□□ -0.13
TRIM55-205ENST00000517647 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
TRIM55-205ENST00000517647 NBPF5PQ86XG9 351 aaPredicted RBP14.22□□□□□ -0.13
TRIM55-205ENST00000517647 ADCY9O60503 1353 aa14.22□□□□□ -0.13
TRIM55-205ENST00000517647 SRGNP10124 158 aa14.21□□□□□ -0.13
TRIM55-205ENST00000517647 CHRNA5P30532 468 aa14.21□□□□□ -0.13
TRIM55-205ENST00000517647 TRIM28Q13263 835 aaKnown RBP14.21□□□□□ -0.13
TRIM55-205ENST00000517647 TTLL6Q8N841 843 aa14.21□□□□□ -0.13
TRIM55-205ENST00000517647 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.13
TRIM55-205ENST00000517647 CHPF2Q9P2E5 772 aa14.21□□□□□ -0.13
TRIM55-205ENST00000517647 BCS1LQ9Y276 419 aa14.21□□□□□ -0.13
TRIM55-205ENST00000517647 UBN2Q6ZU65 1347 aa14.2□□□□□ -0.14
TRIM55-205ENST00000517647 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
TRIM55-205ENST00000517647 CRY2Q49AN0 593 aa14.2□□□□□ -0.14
TRIM55-205ENST00000517647 CCDC30Q5VVM6 783 aa14.2□□□□□ -0.14
TRIM55-205ENST00000517647 C2CD5Q86YS7 1000 aa14.2□□□□□ -0.14
TRIM55-205ENST00000517647 C8orf58Q8NAV2 365 aa14.2□□□□□ -0.14
TRIM55-205ENST00000517647 XAGE3Q8WTP9 111 aa14.2□□□□□ -0.14
TRIM55-205ENST00000517647 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
TRIM55-205ENST00000517647 ANKRD13DQ6ZTN6 518 aa14.19□□□□□ -0.14
TRIM55-205ENST00000517647 PPP1R42Q7Z4L9 355 aa14.19□□□□□ -0.14
TRIM55-205ENST00000517647 FAM9BQ8IZU0 186 aa14.19□□□□□ -0.14
TRIM55-205ENST00000517647 CNKSR1Q969H4 720 aa14.19□□□□□ -0.14
TRIM55-205ENST00000517647 MASTLQ96GX5 879 aa14.19□□□□□ -0.14
TRIM55-205ENST00000517647 ZBTB3Q9H5J0 574 aa14.19□□□□□ -0.14
TRIM55-205ENST00000517647 CACNA1FO60840 1977 aa14.19□□□□□ -0.14
TRIM55-205ENST00000517647 NTSR2O95665 410 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms