RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SNED1Q8TER0 1413 aa11.14□□□□□ -0.63
SCARNA20.3-201ENST00000516913 SCN7AQ01118 1682 aa11.14□□□□□ -0.63
SCARNA20.3-201ENST00000516913 A0A087WZG4 1122 aa11.13□□□□□ -0.63
SCARNA20.3-201ENST00000516913 U2AF1L5P0DN76 240 aaPredicted RBP11.13□□□□□ -0.63
SCARNA20.3-201ENST00000516913 VEGFAP15692 232 aaPredicted RBP11.13□□□□□ -0.63
SCARNA20.3-201ENST00000516913 U2AF1Q01081 240 aaKnown RBP eCLIP11.13□□□□□ -0.63
SCARNA20.3-201ENST00000516913 TTLL7Q6ZT98 887 aa11.13□□□□□ -0.63
SCARNA20.3-201ENST00000516913 COL4A5P29400 1685 aa11.13□□□□□ -0.63
SCARNA20.3-201ENST00000516913 LRP10Q7Z4F1 713 aa11.12□□□□□ -0.63
SCARNA20.3-201ENST00000516913 CNBD1Q8NA66 436 aa11.12□□□□□ -0.63
SCARNA20.3-201ENST00000516913 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
SCARNA20.3-201ENST00000516913 TEX13AQ9BXU3 409 aaPredicted RBP11.12□□□□□ -0.63
SCARNA20.3-201ENST00000516913 ABCC12Q96J65 1359 aa11.12□□□□□ -0.63
SCARNA20.3-201ENST00000516913 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 FER1L6Q2WGJ9 1857 aa11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 FAM177BA6PVY3 158 aa11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 SNRPA1P09661 255 aaKnown RBP11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 PDE6BP35913 854 aa11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 ERFEQ4G0M1 354 aa11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 STYK1Q6J9G0 422 aa11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 SMC1BQ8NDV3 1235 aa11.11□□□□□ -0.63
SCARNA20.3-201ENST00000516913 LTBP3Q9NS15 1303 aa11.1□□□□□ -0.63
SCARNA20.3-201ENST00000516913 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
SCARNA20.3-201ENST00000516913 C16orf71Q8IYS4 520 aaPredicted RBP11.1□□□□□ -0.63
SCARNA20.3-201ENST00000516913 MASTLQ96GX5 879 aa11.1□□□□□ -0.63
SCARNA20.3-201ENST00000516913 ZNF277Q9NRM2 450 aaPredicted RBP11.1□□□□□ -0.63
SCARNA20.3-201ENST00000516913 UBN2Q6ZU65 1347 aa11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 TNRC6CQ9HCJ0 1690 aaKnown RBP11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 EIF4A1P60842 406 aaKnown RBP11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 PDIA6Q15084 440 aa11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 PROSER3Q2NL68 480 aa11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 CLEC4GQ6UXB4 293 aa11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 NUTM1Q86Y26 1132 aa11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 TAOK3Q9H2K8 898 aa11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
SCARNA20.3-201ENST00000516913 BCORQ6W2J9 1755 aa11.08□□□□□ -0.64
SCARNA20.3-201ENST00000516913 NBPF5PQ86XG9 351 aaPredicted RBP11.08□□□□□ -0.64
SCARNA20.3-201ENST00000516913 SYNE4Q8N205 404 aa11.08□□□□□ -0.64
SCARNA20.3-201ENST00000516913 NGEFQ8N5V2 710 aa11.08□□□□□ -0.64
SCARNA20.3-201ENST00000516913 NIP7Q9Y221 180 aaKnown RBP eCLIP11.08□□□□□ -0.64
SCARNA20.3-201ENST00000516913 CACNA1SQ13698 1873 aa11.08□□□□□ -0.64
SCARNA20.3-201ENST00000516913 PASKQ96RG2 1323 aa11.08□□□□□ -0.64
SCARNA20.3-201ENST00000516913 ANXA1P04083 346 aa11.07□□□□□ -0.64
SCARNA20.3-201ENST00000516913 CNKSR1Q969H4 720 aa11.07□□□□□ -0.64
SCARNA20.3-201ENST00000516913 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
SCARNA20.3-201ENST00000516913 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
SCARNA20.3-201ENST00000516913 HTATSF1O43719 755 aaKnown RBP11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 HSPA1AP0DMV8 641 aaKnown RBP11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 HSPA1BP0DMV9 641 aaKnown RBP11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 NPR1P16066 1061 aa11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 SUSD4Q5VX71 490 aa11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 MKRN1Q9UHC7 482 aaKnown RBP11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 RRP7AQ9Y3A4 280 aaKnown RBP11.06□□□□□ -0.64
SCARNA20.3-201ENST00000516913 FZD9O00144 591 aa11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 GPTP24298 496 aa11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 ST5P78524 1137 aa11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 FKBP4Q02790 459 aaKnown RBP eCLIP11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 KRT24Q2M2I5 525 aa11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 ZNF34Q8IZ26 560 aa11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 ZNF428Q96B54 188 aa11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 CFAP53Q96M91 514 aa11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
SCARNA20.3-201ENST00000516913 DICER1Q9UPY3 1922 aaKnown RBP11.04□□□□□ -0.64
SCARNA20.3-201ENST00000516913 NTSR2O95665 410 aa11.04□□□□□ -0.64
SCARNA20.3-201ENST00000516913 NFE2L2Q16236 605 aa11.04□□□□□ -0.64
SCARNA20.3-201ENST00000516913 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
SCARNA20.3-201ENST00000516913 NUDCQ9Y266 331 aa11.04□□□□□ -0.64
SCARNA20.3-201ENST00000516913 LTBP1Q14766 1721 aa11.04□□□□□ -0.64
SCARNA20.3-201ENST00000516913 CAPN15O75808 1086 aa11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 MYL6BP14649 208 aa11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 CCDC93Q567U6 631 aa11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 TPTE2Q6XPS3 522 aa11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 RTF1Q92541 710 aaKnown RBP11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 RNF123Q5XPI4 1314 aa11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
SCARNA20.3-201ENST00000516913 ERVV-1B6SEH8 477 aa11.02□□□□□ -0.65
SCARNA20.3-201ENST00000516913 TCERG1O14776 1098 aaKnown RBP11.02□□□□□ -0.65
SCARNA20.3-201ENST00000516913 RGL2O15211 777 aa11.02□□□□□ -0.65
SCARNA20.3-201ENST00000516913 FOXN1O15353 648 aa11.02□□□□□ -0.65
SCARNA20.3-201ENST00000516913 VEGFBP49765 207 aa11.02□□□□□ -0.65
SCARNA20.3-201ENST00000516913 MAP1SQ66K74 1059 aaPredicted RBP11.02□□□□□ -0.65
SCARNA20.3-201ENST00000516913 ADAMTSL1Q8N6G6 1762 aa11.02□□□□□ -0.65
SCARNA20.3-201ENST00000516913 COL4A1P02462 1669 aa11.01□□□□□ -0.65
SCARNA20.3-201ENST00000516913 KDM3BQ7LBC6 1761 aa11.01□□□□□ -0.65
SCARNA20.3-201ENST00000516913 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
SCARNA20.3-201ENST00000516913 IARSP41252 1262 aaKnown RBP11.01□□□□□ -0.65
SCARNA20.3-201ENST00000516913 EPS15P42566 896 aa11.01□□□□□ -0.65
SCARNA20.3-201ENST00000516913 SCNN1DP51172 638 aa11.01□□□□□ -0.65
SCARNA20.3-201ENST00000516913 CREBZFQ9NS37 354 aa11.01□□□□□ -0.65
SCARNA20.3-201ENST00000516913 SHTN1A0MZ66 631 aa11□□□□□ -0.65
SCARNA20.3-201ENST00000516913 DLK2Q6UY11 383 aa11□□□□□ -0.65
SCARNA20.3-201ENST00000516913 CNTNAP1P78357 1384 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms