RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 NEFLP07196 543 aa5.51□□□□□ -1.53
RNU6-390P-201ENST00000516259 C4orf17Q53FE4 359 aa5.51□□□□□ -1.53
RNU6-390P-201ENST00000516259 SLC27A3Q5K4L6 730 aa5.51□□□□□ -1.53
RNU6-390P-201ENST00000516259 CRIPAKQ8N1N5 446 aa5.51□□□□□ -1.53
RNU6-390P-201ENST00000516259 ZNF428Q96B54 188 aa5.51□□□□□ -1.53
RNU6-390P-201ENST00000516259 IFT43Q96FT9 208 aa5.51□□□□□ -1.53
RNU6-390P-201ENST00000516259 ZNF395Q9H8N7 513 aaPredicted RBP5.51□□□□□ -1.53
RNU6-390P-201ENST00000516259 TNFRSF10AO00220 468 aa5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 PCSK2P16519 638 aa5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 TATP17735 454 aaPredicted RBP5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 PLCB3Q01970 1234 aa5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 DGKZQ13574 1117 aa5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 XKR5Q6UX68 686 aa5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 ETFBKMTQ8IXQ9 262 aa5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 GIPC2Q8TF65 315 aa5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 MRRFQ96E11 262 aaKnown RBP5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 KIAA1522Q9P206 1035 aaPredicted RBP5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 HCN4Q9Y3Q4 1203 aa5.5□□□□□ -1.53
RNU6-390P-201ENST00000516259 A0A1B0GTH6 734 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 DGAT1O75907 488 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 ZAP70P43403 619 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 SH3PXD2AQ5TCZ1 1133 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 MRPL14Q6P1L8 145 aaKnown RBP5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 NBPF10Q6P3W6 841 aaKnown RBP5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 LYSMD3Q7Z3D4 306 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 RNF217Q8TC41 542 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 FBF1Q8TES7 1133 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 FRMD6Q96NE9 622 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 INSM2Q96T92 566 aaPredicted RBP5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 CCDC87Q9NVE4 849 aa5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 DMGDHQ9UI17 866 aaKnown RBP5.49□□□□□ -1.53
RNU6-390P-201ENST00000516259 ZBTB39O15060 712 aa5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 PRPF40AO75400 957 aaKnown RBP5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 PDGFAP04085 211 aa5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 TXLNAP40222 546 aa5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 SCARF1Q14162 830 aa5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 LBRQ14739 615 aaKnown RBP5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 DNAJC25Q9H1X3 360 aa5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 CRISPLD1Q9H336 500 aa5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 SOS2Q07890 1332 aaPredicted RBP5.48□□□□□ -1.53
RNU6-390P-201ENST00000516259 MICAL2O94851 1124 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 P4HBP07237 508 aaKnown RBP5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 ATP4AP20648 1035 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 CTSOP43234 321 aaPredicted RBP5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 PLA2G4AP47712 749 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 AAMPQ13685 434 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 FAM26DQ5JW98 314 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 SAMD5Q5TGI4 173 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 ALG1LQ6GMV1 187 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 NLRP8Q86W28 1048 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 TREML1Q86YW5 311 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 RHPN1Q8TCX5 695 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 PIK3R5Q8WYR1 880 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 NGLY1Q96IV0 654 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 SUSD3Q96L08 255 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 POLMQ9NP87 494 aaPredicted RBP5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 PDZRN3Q9UPQ7 1066 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 BCS1LQ9Y276 419 aa5.47□□□□□ -1.53
RNU6-390P-201ENST00000516259 TTLL8A6PVC2 850 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 GPR182O15218 404 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 EGFRP00533 1210 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 BMP2P12643 396 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 MRPL58Q14197 206 aaKnown RBP5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 LAPTM4AQ15012 233 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 ENOX2Q16206 610 aaKnown RBP5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 PDE12Q6L8Q7 609 aaKnown RBP5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 KLK14Q9P0G3 267 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 POLIQ9UNA4 740 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 FNDC3AQ9Y2H6 1198 aaKnown RBP5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 DYRK1BQ9Y463 629 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 PARP3Q9Y6F1 533 aa5.46□□□□□ -1.54
RNU6-390P-201ENST00000516259 OPLAHO14841 1288 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 INPP5BP32019 993 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 ARSDP51689 593 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 ATP2B2Q01814 1243 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 TMC4Q7Z404 712 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 TMC1Q8TDI8 760 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 EDEM1Q92611 657 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 ZIC5Q96T25 663 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 EFCC1Q9HA90 598 aa5.45□□□□□ -1.54
RNU6-390P-201ENST00000516259 NRG2O14511 850 aaPredicted RBP5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 GIPC1O14908 333 aa5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 LDHBP07195 334 aaKnown RBP5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 EPB42P16452 691 aa5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 KCNQ4P56696 695 aa5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 DNM1Q05193 864 aaKnown RBP5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 POU4F2Q12837 409 aa5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 BTLAQ7Z6A9 289 aa5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 TTC16Q8NEE8 873 aa5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 TIMMDC1Q9NPL8 285 aa5.44□□□□□ -1.54
RNU6-390P-201ENST00000516259 F11P03951 625 aa5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 TCF3P15923 654 aa5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 MSX1P28360 303 aa5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 DAB2P98082 770 aa5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 ATCAYQ86WG3 371 aa5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 AIDAQ96BJ3 306 aa5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 NUDT16Q96DE0 195 aaKnown RBP5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 GMCL1Q96IK5 515 aa5.43□□□□□ -1.54
RNU6-390P-201ENST00000516259 CSRNP1Q96S65 589 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms