RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 ERVV-1B6SEH8 477 aa19.38■□□□□ 0.69
HMGCLL1-209ENST00000515546 ZNF853P0CG23 659 aa19.38■□□□□ 0.69
HMGCLL1-209ENST00000515546 MAP3K15Q6ZN16 1313 aa19.38■□□□□ 0.69
HMGCLL1-209ENST00000515546 CNBD1Q8NA66 436 aa19.38■□□□□ 0.69
HMGCLL1-209ENST00000515546 CFAP44Q96MT7 982 aa19.38■□□□□ 0.69
HMGCLL1-209ENST00000515546 MYL6BP14649 208 aa19.37■□□□□ 0.69
HMGCLL1-209ENST00000515546 HLFQ16534 295 aa19.37■□□□□ 0.69
HMGCLL1-209ENST00000515546 HOXB7P09629 217 aa19.36■□□□□ 0.69
HMGCLL1-209ENST00000515546 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
HMGCLL1-209ENST00000515546 TTLL7Q6ZT98 887 aa19.36■□□□□ 0.69
HMGCLL1-209ENST00000515546 C2CD5Q86YS7 1000 aa19.36■□□□□ 0.69
HMGCLL1-209ENST00000515546 MRS2Q9HD23 443 aa19.36■□□□□ 0.69
HMGCLL1-209ENST00000515546 PDZRN3Q9UPQ7 1066 aa19.36■□□□□ 0.69
HMGCLL1-209ENST00000515546 PDE6BP35913 854 aa19.35■□□□□ 0.69
HMGCLL1-209ENST00000515546 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
HMGCLL1-209ENST00000515546 KIF6Q6ZMV9 814 aa19.35■□□□□ 0.69
HMGCLL1-209ENST00000515546 IFT57Q9NWB7 429 aa19.35■□□□□ 0.69
HMGCLL1-209ENST00000515546 NIP7Q9Y221 180 aaKnown RBP eCLIP19.35■□□□□ 0.69
HMGCLL1-209ENST00000515546 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
HMGCLL1-209ENST00000515546 IBTKQ9P2D0 1353 aaPredicted RBP19.34■□□□□ 0.69
HMGCLL1-209ENST00000515546 H0YIN7 160 aa19.34■□□□□ 0.69
HMGCLL1-209ENST00000515546 ST5P78524 1137 aa19.34■□□□□ 0.69
HMGCLL1-209ENST00000515546 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
HMGCLL1-209ENST00000515546 NBPF5PQ86XG9 351 aaPredicted RBP19.34■□□□□ 0.69
HMGCLL1-209ENST00000515546 NGEFQ8N5V2 710 aa19.34■□□□□ 0.69
HMGCLL1-209ENST00000515546 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
HMGCLL1-209ENST00000515546 NUP98P52948 1817 aa19.34■□□□□ 0.69
HMGCLL1-209ENST00000515546 EIF2S2P20042 333 aaKnown RBP19.33■□□□□ 0.68
HMGCLL1-209ENST00000515546 CCDC24Q8N4L8 307 aa19.33■□□□□ 0.68
HMGCLL1-209ENST00000515546 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
HMGCLL1-209ENST00000515546 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
HMGCLL1-209ENST00000515546 ARHGAP27Q6ZUM4 889 aa19.32■□□□□ 0.68
HMGCLL1-209ENST00000515546 TTLL6Q8N841 843 aa19.32■□□□□ 0.68
HMGCLL1-209ENST00000515546 ZBTB3Q9H5J0 574 aa19.32■□□□□ 0.68
HMGCLL1-209ENST00000515546 RIC1Q4ADV7 1423 aa19.32■□□□□ 0.68
HMGCLL1-209ENST00000515546 ARFGEF2Q9Y6D5 1785 aa19.32■□□□□ 0.68
HMGCLL1-209ENST00000515546 TNRC6CQ9HCJ0 1690 aaKnown RBP19.31■□□□□ 0.68
HMGCLL1-209ENST00000515546 GNAI1P63096 354 aa19.31■□□□□ 0.68
HMGCLL1-209ENST00000515546 DDX21Q9NR30 783 aaKnown RBP eCLIP19.31■□□□□ 0.68
HMGCLL1-209ENST00000515546 UBN2Q6ZU65 1347 aa19.3■□□□□ 0.68
HMGCLL1-209ENST00000515546 KLRG2A4D1S0 409 aaPredicted RBP19.3■□□□□ 0.68
HMGCLL1-209ENST00000515546 ANXA1P04083 346 aa19.3■□□□□ 0.68
HMGCLL1-209ENST00000515546 SRGNP10124 158 aa19.3■□□□□ 0.68
HMGCLL1-209ENST00000515546 TPTE2Q6XPS3 522 aa19.3■□□□□ 0.68
HMGCLL1-209ENST00000515546 GIGYF2Q6Y7W6 1299 aaKnown RBP19.3■□□□□ 0.68
HMGCLL1-209ENST00000515546 ABCC12Q96J65 1359 aa19.3■□□□□ 0.68
HMGCLL1-209ENST00000515546 NPHP1O15259 732 aa19.29■□□□□ 0.68
HMGCLL1-209ENST00000515546 HDGFL1Q5TGJ6 251 aa19.29■□□□□ 0.68
HMGCLL1-209ENST00000515546 STYK1Q6J9G0 422 aa19.29■□□□□ 0.68
HMGCLL1-209ENST00000515546 ZNF34Q8IZ26 560 aa19.29■□□□□ 0.68
HMGCLL1-209ENST00000515546 DUSP27Q5VZP5 1158 aa19.28■□□□□ 0.68
HMGCLL1-209ENST00000515546 NECTIN2Q92692 538 aa19.28■□□□□ 0.68
HMGCLL1-209ENST00000515546 CHPF2Q9P2E5 772 aa19.28■□□□□ 0.68
HMGCLL1-209ENST00000515546 ANKRD36CQ5JPF3 1778 aa19.28■□□□□ 0.68
HMGCLL1-209ENST00000515546 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
HMGCLL1-209ENST00000515546 XAGE3Q8WTP9 111 aa19.27■□□□□ 0.68
HMGCLL1-209ENST00000515546 NYXQ9GZU5 481 aa19.27■□□□□ 0.68
HMGCLL1-209ENST00000515546 GPTP24298 496 aa19.26■□□□□ 0.67
HMGCLL1-209ENST00000515546 COPS6Q7L5N1 327 aa19.26■□□□□ 0.67
HMGCLL1-209ENST00000515546 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.67
HMGCLL1-209ENST00000515546 MASTLQ96GX5 879 aa19.26■□□□□ 0.67
HMGCLL1-209ENST00000515546 DBF4Q9UBU7 674 aaPredicted RBP19.26■□□□□ 0.67
HMGCLL1-209ENST00000515546 IL16Q14005 1332 aa19.25■□□□□ 0.67
HMGCLL1-209ENST00000515546 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
HMGCLL1-209ENST00000515546 NTSR2O95665 410 aa19.25■□□□□ 0.67
HMGCLL1-209ENST00000515546 CRY2Q49AN0 593 aa19.25■□□□□ 0.67
HMGCLL1-209ENST00000515546 PARP10Q53GL7 1025 aa19.25■□□□□ 0.67
HMGCLL1-209ENST00000515546 C9orf131Q5VYM1 1079 aa19.25■□□□□ 0.67
HMGCLL1-209ENST00000515546 CNKSR1Q969H4 720 aa19.25■□□□□ 0.67
HMGCLL1-209ENST00000515546 SBF1O95248 1867 aa19.24■□□□□ 0.67
HMGCLL1-209ENST00000515546 SLX4Q8IY92 1834 aa19.24■□□□□ 0.67
HMGCLL1-209ENST00000515546 NFKBIEO00221 500 aa19.24■□□□□ 0.67
HMGCLL1-209ENST00000515546 NPR1P16066 1061 aa19.24■□□□□ 0.67
HMGCLL1-209ENST00000515546 SUSD4Q5VX71 490 aa19.24■□□□□ 0.67
HMGCLL1-209ENST00000515546 PRPF40BQ6NWY9 871 aaKnown RBP19.24■□□□□ 0.67
HMGCLL1-209ENST00000515546 FER1L6Q2WGJ9 1857 aa19.23■□□□□ 0.67
HMGCLL1-209ENST00000515546 RASSF7Q02833 373 aa19.23■□□□□ 0.67
HMGCLL1-209ENST00000515546 ERFEQ4G0M1 354 aa19.23■□□□□ 0.67
HMGCLL1-209ENST00000515546 NUTM1Q86Y26 1132 aa19.23■□□□□ 0.67
HMGCLL1-209ENST00000515546 C8orf58Q8NAV2 365 aa19.23■□□□□ 0.67
HMGCLL1-209ENST00000515546 HYPKQ9NX55 129 aa19.23■□□□□ 0.67
HMGCLL1-209ENST00000515546 RNF123Q5XPI4 1314 aa19.23■□□□□ 0.67
HMGCLL1-209ENST00000515546 PRELPP51888 382 aa19.22■□□□□ 0.67
HMGCLL1-209ENST00000515546 AIMP1Q12904 312 aaKnown RBP19.22■□□□□ 0.67
HMGCLL1-209ENST00000515546 HSP90AB3PQ58FF7 597 aa19.22■□□□□ 0.67
HMGCLL1-209ENST00000515546 GPBP1L1Q9HC44 474 aaPredicted RBP19.22■□□□□ 0.67
HMGCLL1-209ENST00000515546 CACNA1SQ13698 1873 aa19.22■□□□□ 0.67
HMGCLL1-209ENST00000515546 LTBP3Q9NS15 1303 aa19.22■□□□□ 0.67
HMGCLL1-209ENST00000515546 ZC3H4Q9UPT8 1303 aaKnown RBP19.22■□□□□ 0.67
HMGCLL1-209ENST00000515546 SENP3-EIF4A1A0A087X0R7 540 aa19.21■□□□□ 0.67
HMGCLL1-209ENST00000515546 C21orf2O43822 256 aa19.21■□□□□ 0.67
HMGCLL1-209ENST00000515546 GTF2E1P29083 439 aaPredicted RBP19.21■□□□□ 0.67
HMGCLL1-209ENST00000515546 PLBD2Q8NHP8 589 aa19.21■□□□□ 0.67
HMGCLL1-209ENST00000515546 C7orf43Q8WVR3 580 aa19.21■□□□□ 0.67
HMGCLL1-209ENST00000515546 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
HMGCLL1-209ENST00000515546 RNF181Q9P0P0 153 aa19.21■□□□□ 0.67
HMGCLL1-209ENST00000515546 TIAM2Q8IVF5 1701 aa19.2■□□□□ 0.66
HMGCLL1-209ENST00000515546 LMNB1P20700 586 aa19.2■□□□□ 0.66
HMGCLL1-209ENST00000515546 TCIRG1Q13488 830 aa19.2■□□□□ 0.66
HMGCLL1-209ENST00000515546 PPP1R42Q7Z4L9 355 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms