RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 TJP1Q07157 1748 aa18.79■□□□□ 0.6
SMAD1-216ENST00000515527 FLT4P35916 1363 aa18.79■□□□□ 0.6
SMAD1-216ENST00000515527 FZD9O00144 591 aa18.78■□□□□ 0.6
SMAD1-216ENST00000515527 EPS15P42566 896 aa18.78■□□□□ 0.6
SMAD1-216ENST00000515527 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
SMAD1-216ENST00000515527 PKN2Q16513 984 aaKnown RBP18.78■□□□□ 0.6
SMAD1-216ENST00000515527 TRIOBPQ9H2D6 2365 aa18.78■□□□□ 0.6
SMAD1-216ENST00000515527 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.6
SMAD1-216ENST00000515527 CABP4P57796 275 aa18.77■□□□□ 0.6
SMAD1-216ENST00000515527 USP50Q70EL3 339 aaPredicted RBP18.77■□□□□ 0.6
SMAD1-216ENST00000515527 BCL2L12Q9HB09 334 aa18.77■□□□□ 0.6
SMAD1-216ENST00000515527 RNF186Q9NXI6 227 aa18.77■□□□□ 0.6
SMAD1-216ENST00000515527 ARFGEF2Q9Y6D5 1785 aa18.77■□□□□ 0.6
SMAD1-216ENST00000515527 STYK1Q6J9G0 422 aa18.76■□□□□ 0.59
SMAD1-216ENST00000515527 SYNE4Q8N205 404 aa18.76■□□□□ 0.59
SMAD1-216ENST00000515527 RAB3GAP2Q9H2M9 1393 aa18.76■□□□□ 0.59
SMAD1-216ENST00000515527 COL15A1P39059 1388 aa18.75■□□□□ 0.59
SMAD1-216ENST00000515527 SCN11AQ9UI33 1791 aa18.75■□□□□ 0.59
SMAD1-216ENST00000515527 NPHP1O15259 732 aa18.74■□□□□ 0.59
SMAD1-216ENST00000515527 HDAC9Q9UKV0 1011 aa18.74■□□□□ 0.59
SMAD1-216ENST00000515527 COL6A3P12111 3177 aa18.74■□□□□ 0.59
SMAD1-216ENST00000515527 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
SMAD1-216ENST00000515527 TONSLQ96HA7 1378 aa18.73■□□□□ 0.59
SMAD1-216ENST00000515527 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
SMAD1-216ENST00000515527 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
SMAD1-216ENST00000515527 HUNKP57058 714 aa18.73■□□□□ 0.59
SMAD1-216ENST00000515527 PRR5LQ6MZQ0 368 aa18.73■□□□□ 0.59
SMAD1-216ENST00000515527 JDP2Q8WYK2 163 aa18.73■□□□□ 0.59
SMAD1-216ENST00000515527 MASTLQ96GX5 879 aa18.73■□□□□ 0.59
SMAD1-216ENST00000515527 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
SMAD1-216ENST00000515527 ROCK2O75116 1388 aaKnown RBP18.72■□□□□ 0.59
SMAD1-216ENST00000515527 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
SMAD1-216ENST00000515527 SCNN1DP51172 638 aa18.72■□□□□ 0.59
SMAD1-216ENST00000515527 KIF23Q02241 960 aaPredicted RBP18.72■□□□□ 0.59
SMAD1-216ENST00000515527 SRGNP10124 158 aa18.71■□□□□ 0.59
SMAD1-216ENST00000515527 MNX1P50219 401 aaPredicted RBP18.71■□□□□ 0.59
SMAD1-216ENST00000515527 DNAJC10Q8IXB1 793 aa18.71■□□□□ 0.59
SMAD1-216ENST00000515527 GGNBP2Q9H3C7 697 aa18.71■□□□□ 0.59
SMAD1-216ENST00000515527 KIF24Q5T7B8 1368 aa18.7■□□□□ 0.58
SMAD1-216ENST00000515527 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
SMAD1-216ENST00000515527 BCORQ6W2J9 1755 aa18.69■□□□□ 0.58
SMAD1-216ENST00000515527 RTKN2Q8IZC4 609 aa18.69■□□□□ 0.58
SMAD1-216ENST00000515527 TBC1D9BQ66K14 1250 aa18.68■□□□□ 0.58
SMAD1-216ENST00000515527 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
SMAD1-216ENST00000515527 EYA1Q99502 592 aa18.68■□□□□ 0.58
SMAD1-216ENST00000515527 FAM155AB1AL88 458 aaPredicted RBP18.67■□□□□ 0.58
SMAD1-216ENST00000515527 RGMBQ6NW40 437 aa18.67■□□□□ 0.58
SMAD1-216ENST00000515527 PPM1GO15355 546 aaPredicted RBP18.66■□□□□ 0.58
SMAD1-216ENST00000515527 ST5P78524 1137 aa18.66■□□□□ 0.58
SMAD1-216ENST00000515527 FBXO46Q6PJ61 603 aaPredicted RBP18.66■□□□□ 0.58
SMAD1-216ENST00000515527 CNBD1Q8NA66 436 aa18.66■□□□□ 0.58
SMAD1-216ENST00000515527 CCDC102AQ96A19 550 aa18.66■□□□□ 0.58
SMAD1-216ENST00000515527 ZBTB1Q9Y2K1 713 aa18.66■□□□□ 0.58
SMAD1-216ENST00000515527 CYP19A1P11511 503 aaPredicted RBP18.65■□□□□ 0.58
SMAD1-216ENST00000515527 NFATC2IPQ8NCF5 419 aa18.65■□□□□ 0.58
SMAD1-216ENST00000515527 ADARB2Q9NS39 739 aaKnown RBP18.65■□□□□ 0.58
SMAD1-216ENST00000515527 EMILIN1Q9Y6C2 1016 aa18.65■□□□□ 0.58
SMAD1-216ENST00000515527 CEP290O15078 2479 aa18.65■□□□□ 0.58
SMAD1-216ENST00000515527 FYB1O15117 783 aa18.64■□□□□ 0.57
SMAD1-216ENST00000515527 POTEFA5A3E0 1075 aa18.63■□□□□ 0.57
SMAD1-216ENST00000515527 ZNF157P51786 506 aaPredicted RBP18.63■□□□□ 0.57
SMAD1-216ENST00000515527 CSRNP1Q96S65 589 aa18.62■□□□□ 0.57
SMAD1-216ENST00000515527 ANKRD26Q9UPS8 1709 aa18.61■□□□□ 0.57
SMAD1-216ENST00000515527 ST20-MTHFSA0A0A6YYL1 179 aa18.61■□□□□ 0.57
SMAD1-216ENST00000515527 CANXP27824 592 aaKnown RBP18.61■□□□□ 0.57
SMAD1-216ENST00000515527 MTHFSP49914 203 aa18.61■□□□□ 0.57
SMAD1-216ENST00000515527 CDC37L1Q7L3B6 337 aa18.61■□□□□ 0.57
SMAD1-216ENST00000515527 ZNF296Q8WUU4 475 aaPredicted RBP18.61■□□□□ 0.57
SMAD1-216ENST00000515527 ZNF530Q6P9A1 599 aaPredicted RBP18.6■□□□□ 0.57
SMAD1-216ENST00000515527 GPRC5DQ9NZD1 345 aa18.6■□□□□ 0.57
SMAD1-216ENST00000515527 NPR1P16066 1061 aa18.59■□□□□ 0.57
SMAD1-216ENST00000515527 KIAA0100Q14667 2235 aaKnown RBP18.59■□□□□ 0.57
SMAD1-216ENST00000515527 PAPPA2Q9BXP8 1791 aa18.58■□□□□ 0.57
SMAD1-216ENST00000515527 COL4A5P29400 1685 aa18.58■□□□□ 0.57
SMAD1-216ENST00000515527 SETDB2Q96T68 719 aa18.58■□□□□ 0.56
SMAD1-216ENST00000515527 A0A087WZG4 1122 aa18.57■□□□□ 0.56
SMAD1-216ENST00000515527 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
SMAD1-216ENST00000515527 LARGE2Q8N3Y3 721 aa18.57■□□□□ 0.56
SMAD1-216ENST00000515527 C2orf69Q8N8R5 385 aa18.57■□□□□ 0.56
SMAD1-216ENST00000515527 OTUD5Q96G74 571 aa18.57■□□□□ 0.56
SMAD1-216ENST00000515527 PUS7Q96PZ0 661 aaKnown RBP18.57■□□□□ 0.56
SMAD1-216ENST00000515527 PSMD1Q99460 953 aa18.57■□□□□ 0.56
SMAD1-216ENST00000515527 PGAP2Q9UHJ9 254 aa18.57■□□□□ 0.56
SMAD1-216ENST00000515527 USP48Q86UV5 1035 aa18.56■□□□□ 0.56
SMAD1-216ENST00000515527 GBA2Q9HCG7 927 aaPredicted RBP18.56■□□□□ 0.56
SMAD1-216ENST00000515527 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
SMAD1-216ENST00000515527 SCN7AQ01118 1682 aa18.55■□□□□ 0.56
SMAD1-216ENST00000515527 TBC1D8O95759 1140 aa18.55■□□□□ 0.56
SMAD1-216ENST00000515527 INTS3Q68E01 1043 aaKnown RBP18.55■□□□□ 0.56
SMAD1-216ENST00000515527 CHRDL2Q6WN34 429 aa18.55■□□□□ 0.56
SMAD1-216ENST00000515527 ZC3H15Q8WU90 426 aaKnown RBP18.55■□□□□ 0.56
SMAD1-216ENST00000515527 KIF20BQ96Q89 1820 aa18.54■□□□□ 0.56
SMAD1-216ENST00000515527 SLC10A3P09131 477 aa18.54■□□□□ 0.56
SMAD1-216ENST00000515527 C1orf141Q5JVX7 400 aa18.54■□□□□ 0.56
SMAD1-216ENST00000515527 REM2Q8IYK8 340 aaPredicted RBP18.54■□□□□ 0.56
SMAD1-216ENST00000515527 L3MBTL2Q969R5 705 aa18.54■□□□□ 0.56
SMAD1-216ENST00000515527 ZNF330Q9Y3S2 320 aaPredicted RBP18.54■□□□□ 0.56
SMAD1-216ENST00000515527 RBBP6Q7Z6E9 1792 aaKnown RBP18.53■□□□□ 0.56
SMAD1-216ENST00000515527 H0YGN5 161 aa18.53■□□□□ 0.56
SMAD1-216ENST00000515527 DLK2Q6UY11 383 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms