RNA–Protein interactions for RNA: ENST00000515008.1

SIL1-215, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 843 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-215ENST00000515008 SBF1O95248 1867 aa23.19■■□□□ 1.3
SIL1-215ENST00000515008 C9orf131Q5VYM1 1079 aa23.19■■□□□ 1.3
SIL1-215ENST00000515008 CCDC146Q8IYE0 955 aa23.19■■□□□ 1.3
SIL1-215ENST00000515008 NBPF5PQ86XG9 351 aaPredicted RBP23.18■■□□□ 1.3
SIL1-215ENST00000515008 ERVV-1B6SEH8 477 aa23.17■■□□□ 1.3
SIL1-215ENST00000515008 ADAMTS8Q9UP79 889 aa23.17■■□□□ 1.3
SIL1-215ENST00000515008 NIP7Q9Y221 180 aaKnown RBP eCLIP23.17■■□□□ 1.3
SIL1-215ENST00000515008 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
SIL1-215ENST00000515008 KIF6Q6ZMV9 814 aa23.16■■□□□ 1.3
SIL1-215ENST00000515008 RNF181Q9P0P0 153 aa23.16■■□□□ 1.3
SIL1-215ENST00000515008 RRP7AQ9Y3A4 280 aaKnown RBP23.16■■□□□ 1.3
SIL1-215ENST00000515008 NUP98P52948 1817 aa23.15■■□□□ 1.3
SIL1-215ENST00000515008 MAP3K15Q6ZN16 1313 aa23.15■■□□□ 1.3
SIL1-215ENST00000515008 ZC3H4Q9UPT8 1303 aaKnown RBP23.15■■□□□ 1.3
SIL1-215ENST00000515008 STYK1Q6J9G0 422 aa23.15■■□□□ 1.3
SIL1-215ENST00000515008 TPTE2Q6XPS3 522 aa23.15■■□□□ 1.3
SIL1-215ENST00000515008 ZNF622Q969S3 477 aaKnown RBP eCLIP23.15■■□□□ 1.3
SIL1-215ENST00000515008 CCDC24Q8N4L8 307 aa23.14■■□□□ 1.29
SIL1-215ENST00000515008 CNKSR1Q969H4 720 aa23.14■■□□□ 1.29
SIL1-215ENST00000515008 SENP3-EIF4A1A0A087X0R7 540 aa23.13■■□□□ 1.29
SIL1-215ENST00000515008 KIF3CO14782 793 aa23.13■■□□□ 1.29
SIL1-215ENST00000515008 SRGNP10124 158 aa23.13■■□□□ 1.29
SIL1-215ENST00000515008 NEUROD2Q15784 382 aa23.13■■□□□ 1.29
SIL1-215ENST00000515008 HLFQ16534 295 aa23.13■■□□□ 1.29
SIL1-215ENST00000515008 MASTLQ96GX5 879 aa23.13■■□□□ 1.29
SIL1-215ENST00000515008 TRIM35Q9UPQ4 493 aa23.13■■□□□ 1.29
SIL1-215ENST00000515008 MYL6BP14649 208 aa23.12■■□□□ 1.29
SIL1-215ENST00000515008 RASSF7Q02833 373 aa23.12■■□□□ 1.29
SIL1-215ENST00000515008 NGEFQ8N5V2 710 aa23.12■■□□□ 1.29
SIL1-215ENST00000515008 IBTKQ9P2D0 1353 aaPredicted RBP23.12■■□□□ 1.29
SIL1-215ENST00000515008 CHL1O00533 1208 aa23.11■■□□□ 1.29
SIL1-215ENST00000515008 LMNB1P20700 586 aa23.11■■□□□ 1.29
SIL1-215ENST00000515008 NYXQ9GZU5 481 aa23.11■■□□□ 1.29
SIL1-215ENST00000515008 FER1L6Q2WGJ9 1857 aa23.11■■□□□ 1.29
SIL1-215ENST00000515008 KLRG2A4D1S0 409 aaPredicted RBP23.1■■□□□ 1.29
SIL1-215ENST00000515008 TTLL7Q6ZT98 887 aa23.1■■□□□ 1.29
SIL1-215ENST00000515008 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
SIL1-215ENST00000515008 CACNA1SQ13698 1873 aa23.09■■□□□ 1.29
SIL1-215ENST00000515008 NFKBIEO00221 500 aa23.09■■□□□ 1.29
SIL1-215ENST00000515008 SOGA3Q5TF21 947 aa23.09■■□□□ 1.29
SIL1-215ENST00000515008 SLX4Q8IY92 1834 aa23.09■■□□□ 1.29
SIL1-215ENST00000515008 TNRC6CQ9HCJ0 1690 aaKnown RBP23.09■■□□□ 1.29
SIL1-215ENST00000515008 RIC1Q4ADV7 1423 aa23.08■■□□□ 1.29
SIL1-215ENST00000515008 TIAM2Q8IVF5 1701 aa23.08■■□□□ 1.29
SIL1-215ENST00000515008 NPR1P16066 1061 aa23.08■■□□□ 1.29
SIL1-215ENST00000515008 EIF2S2P20042 333 aaKnown RBP23.08■■□□□ 1.29
SIL1-215ENST00000515008 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
SIL1-215ENST00000515008 LRP10Q7Z4F1 713 aa23.08■■□□□ 1.29
SIL1-215ENST00000515008 CCDC88AQ3V6T2 1871 aa23.08■■□□□ 1.29
SIL1-215ENST00000515008 LTBP3Q9NS15 1303 aa23.08■■□□□ 1.28
SIL1-215ENST00000515008 C21orf2O43822 256 aa23.07■■□□□ 1.28
SIL1-215ENST00000515008 HOXB7P09629 217 aa23.07■■□□□ 1.28
SIL1-215ENST00000515008 PDIA6Q15084 440 aa23.07■■□□□ 1.28
SIL1-215ENST00000515008 GIGYF2Q6Y7W6 1299 aaKnown RBP23.07■■□□□ 1.28
SIL1-215ENST00000515008 ZBTB3Q9H5J0 574 aa23.07■■□□□ 1.28
SIL1-215ENST00000515008 GTF2E1P29083 439 aaPredicted RBP23.06■■□□□ 1.28
SIL1-215ENST00000515008 DICER1Q9UPY3 1922 aaKnown RBP23.06■■□□□ 1.28
SIL1-215ENST00000515008 FAM177BA6PVY3 158 aa23.05■■□□□ 1.28
SIL1-215ENST00000515008 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
SIL1-215ENST00000515008 NMRK2Q9NPI5 230 aa23.05■■□□□ 1.28
SIL1-215ENST00000515008 LAS1LQ9Y4W2 734 aaKnown RBP23.05■■□□□ 1.28
SIL1-215ENST00000515008 ABCC12Q96J65 1359 aa23.04■■□□□ 1.28
SIL1-215ENST00000515008 TOMM70O94826 608 aa23.04■■□□□ 1.28
SIL1-215ENST00000515008 PRELPP51888 382 aa23.04■■□□□ 1.28
SIL1-215ENST00000515008 CALD1Q05682 793 aaKnown RBP23.04■■□□□ 1.28
SIL1-215ENST00000515008 ZNF34Q8IZ26 560 aa23.04■■□□□ 1.28
SIL1-215ENST00000515008 UBN2Q6ZU65 1347 aa23.04■■□□□ 1.28
SIL1-215ENST00000515008 PROSER3Q2NL68 480 aa23.03■■□□□ 1.28
SIL1-215ENST00000515008 PARP10Q53GL7 1025 aa23.03■■□□□ 1.28
SIL1-215ENST00000515008 TAOK3Q9H2K8 898 aa23.03■■□□□ 1.28
SIL1-215ENST00000515008 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
SIL1-215ENST00000515008 ZNF219Q9P2Y4 722 aaPredicted RBP23.03■■□□□ 1.28
SIL1-215ENST00000515008 ANKRD36CQ5JPF3 1778 aa23.03■■□□□ 1.28
SIL1-215ENST00000515008 APAF1O14727 1248 aa23.02■■□□□ 1.28
SIL1-215ENST00000515008 GPTP24298 496 aa23.02■■□□□ 1.28
SIL1-215ENST00000515008 CRY2Q49AN0 593 aa23.02■■□□□ 1.28
SIL1-215ENST00000515008 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
SIL1-215ENST00000515008 HSPA6P17066 643 aa23.01■■□□□ 1.27
SIL1-215ENST00000515008 ALDH1B1P30837 517 aa23.01■■□□□ 1.27
SIL1-215ENST00000515008 CCDC93Q567U6 631 aa23.01■■□□□ 1.27
SIL1-215ENST00000515008 PPP1R42Q7Z4L9 355 aa23.01■■□□□ 1.27
SIL1-215ENST00000515008 C7orf43Q8WVR3 580 aa23.01■■□□□ 1.27
SIL1-215ENST00000515008 ANXA1P04083 346 aa23■■□□□ 1.27
SIL1-215ENST00000515008 KRT24Q2M2I5 525 aa23■■□□□ 1.27
SIL1-215ENST00000515008 HSP90AB3PQ58FF7 597 aa23■■□□□ 1.27
SIL1-215ENST00000515008 HDGFL1Q5TGJ6 251 aa23■■□□□ 1.27
SIL1-215ENST00000515008 SUSD4Q5VX71 490 aa23■■□□□ 1.27
SIL1-215ENST00000515008 NUTM1Q86Y26 1132 aa23■■□□□ 1.27
SIL1-215ENST00000515008 IFT57Q9NWB7 429 aa23■■□□□ 1.27
SIL1-215ENST00000515008 RNF123Q5XPI4 1314 aa23■■□□□ 1.27
SIL1-215ENST00000515008 GLTPD2A6NH11 291 aa22.99■■□□□ 1.27
SIL1-215ENST00000515008 NTSR2O95665 410 aa22.99■■□□□ 1.27
SIL1-215ENST00000515008 ZNF853P0CG23 659 aa22.99■■□□□ 1.27
SIL1-215ENST00000515008 ERFEQ4G0M1 354 aa22.99■■□□□ 1.27
SIL1-215ENST00000515008 C16orf71Q8IYS4 520 aaPredicted RBP22.99■■□□□ 1.27
SIL1-215ENST00000515008 RBM46Q8TBY0 533 aaKnown RBP22.99■■□□□ 1.27
SIL1-215ENST00000515008 XAGE3Q8WTP9 111 aa22.99■■□□□ 1.27
SIL1-215ENST00000515008 NECTIN2Q92692 538 aa22.99■■□□□ 1.27
SIL1-215ENST00000515008 GNAI1P63096 354 aa22.98■■□□□ 1.27
SIL1-215ENST00000515008 COPS6Q7L5N1 327 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms