RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ST5P78524 1137 aa32.03■■■□□ 2.72
SNF8-213ENST00000514929 PDZRN3Q9UPQ7 1066 aa32.03■■■□□ 2.72
SNF8-213ENST00000514929 DLEC1Q9Y238 1755 aa32.03■■■□□ 2.72
SNF8-213ENST00000514929 ERBB4Q15303 1308 aa32.02■■■□□ 2.72
SNF8-213ENST00000514929 ANKRD31Q8N7Z5 1873 aa32.02■■■□□ 2.72
SNF8-213ENST00000514929 EIF2S2P20042 333 aaKnown RBP32.02■■■□□ 2.72
SNF8-213ENST00000514929 KIF6Q6ZMV9 814 aa32.02■■■□□ 2.72
SNF8-213ENST00000514929 NBPF5PQ86XG9 351 aaPredicted RBP32.02■■■□□ 2.72
SNF8-213ENST00000514929 NIP7Q9Y221 180 aaKnown RBP eCLIP32.02■■■□□ 2.72
SNF8-213ENST00000514929 CHL1O00533 1208 aa32.01■■■□□ 2.71
SNF8-213ENST00000514929 APAF1O14727 1248 aa32.01■■■□□ 2.71
SNF8-213ENST00000514929 HLFQ16534 295 aa32.01■■■□□ 2.71
SNF8-213ENST00000514929 TTLL6Q8N841 843 aa32.01■■■□□ 2.71
SNF8-213ENST00000514929 ANP32CO43423 234 aa31.99■■■□□ 2.71
SNF8-213ENST00000514929 CCDC184Q52MB2 194 aa31.99■■■□□ 2.71
SNF8-213ENST00000514929 TTLL7Q6ZT98 887 aa31.99■■■□□ 2.71
SNF8-213ENST00000514929 ZNF526Q8TF50 670 aaPredicted RBP31.99■■■□□ 2.71
SNF8-213ENST00000514929 ERVV-1B6SEH8 477 aa31.98■■■□□ 2.71
SNF8-213ENST00000514929 ZNF622Q969S3 477 aaKnown RBP eCLIP31.98■■■□□ 2.71
SNF8-213ENST00000514929 GPBP1L1Q9HC44 474 aaPredicted RBP31.98■■■□□ 2.71
SNF8-213ENST00000514929 MAP3K15Q6ZN16 1313 aa31.98■■■□□ 2.71
SNF8-213ENST00000514929 FAM177BA6PVY3 158 aa31.96■■■□□ 2.71
SNF8-213ENST00000514929 TPTE2Q6XPS3 522 aa31.96■■■□□ 2.71
SNF8-213ENST00000514929 ZBTB3Q9H5J0 574 aa31.95■■■□□ 2.71
SNF8-213ENST00000514929 NECTIN2Q92692 538 aa31.94■■■□□ 2.7
SNF8-213ENST00000514929 CFAP44Q96MT7 982 aa31.94■■■□□ 2.7
SNF8-213ENST00000514929 COL11A2P13942 1736 aaPredicted RBP31.94■■■□□ 2.7
SNF8-213ENST00000514929 KRT24Q2M2I5 525 aa31.93■■■□□ 2.7
SNF8-213ENST00000514929 C9orf131Q5VYM1 1079 aa31.93■■■□□ 2.7
SNF8-213ENST00000514929 PDIA6Q15084 440 aa31.92■■■□□ 2.7
SNF8-213ENST00000514929 NUP98P52948 1817 aa31.91■■■□□ 2.7
SNF8-213ENST00000514929 ANXA1P04083 346 aa31.91■■■□□ 2.7
SNF8-213ENST00000514929 GTF2E1P29083 439 aaPredicted RBP31.91■■■□□ 2.7
SNF8-213ENST00000514929 CALD1Q05682 793 aaKnown RBP31.91■■■□□ 2.7
SNF8-213ENST00000514929 MRS2Q9HD23 443 aa31.91■■■□□ 2.7
SNF8-213ENST00000514929 C1QTNF8P60827 252 aa31.9■■■□□ 2.7
SNF8-213ENST00000514929 PROSER3Q2NL68 480 aa31.9■■■□□ 2.7
SNF8-213ENST00000514929 SRGNP10124 158 aa31.89■■■□□ 2.7
SNF8-213ENST00000514929 STYK1Q6J9G0 422 aa31.89■■■□□ 2.7
SNF8-213ENST00000514929 LRP10Q7Z4F1 713 aa31.89■■■□□ 2.7
SNF8-213ENST00000514929 RNF181Q9P0P0 153 aa31.89■■■□□ 2.7
SNF8-213ENST00000514929 GPTP24298 496 aa31.88■■■□□ 2.69
SNF8-213ENST00000514929 CNKSR1Q969H4 720 aa31.88■■■□□ 2.69
SNF8-213ENST00000514929 MASTLQ96GX5 879 aa31.88■■■□□ 2.69
SNF8-213ENST00000514929 NYXQ9GZU5 481 aa31.88■■■□□ 2.69
SNF8-213ENST00000514929 RASSF7Q02833 373 aa31.87■■■□□ 2.69
SNF8-213ENST00000514929 GIGYF2Q6Y7W6 1299 aaKnown RBP31.87■■■□□ 2.69
SNF8-213ENST00000514929 MBIPQ9NS73 344 aa31.87■■■□□ 2.69
SNF8-213ENST00000514929 ZNF219Q9P2Y4 722 aaPredicted RBP31.87■■■□□ 2.69
SNF8-213ENST00000514929 GNAI1P63096 354 aa31.86■■■□□ 2.69
SNF8-213ENST00000514929 HDGFL1Q5TGJ6 251 aa31.86■■■□□ 2.69
SNF8-213ENST00000514929 IFT57Q9NWB7 429 aa31.86■■■□□ 2.69
SNF8-213ENST00000514929 C21orf2O43822 256 aa31.85■■■□□ 2.69
SNF8-213ENST00000514929 HOXB7P09629 217 aa31.85■■■□□ 2.69
SNF8-213ENST00000514929 DDX21Q9NR30 783 aaKnown RBP eCLIP31.85■■■□□ 2.69
SNF8-213ENST00000514929 ZNF853P0CG23 659 aa31.84■■■□□ 2.69
SNF8-213ENST00000514929 AIMP1Q12904 312 aaKnown RBP31.84■■■□□ 2.69
SNF8-213ENST00000514929 COPS6Q7L5N1 327 aa31.84■■■□□ 2.69
SNF8-213ENST00000514929 UBN2Q6ZU65 1347 aa31.83■■■□□ 2.69
SNF8-213ENST00000514929 ZNF34Q8IZ26 560 aa31.83■■■□□ 2.69
SNF8-213ENST00000514929 XAGE3Q8WTP9 111 aa31.83■■■□□ 2.69
SNF8-213ENST00000514929 KLRG2A4D1S0 409 aaPredicted RBP31.82■■■□□ 2.68
SNF8-213ENST00000514929 NPR1P16066 1061 aa31.82■■■□□ 2.68
SNF8-213ENST00000514929 DUSP27Q5VZP5 1158 aa31.82■■■□□ 2.68
SNF8-213ENST00000514929 PRPF40BQ6NWY9 871 aaKnown RBP31.82■■■□□ 2.68
SNF8-213ENST00000514929 NUTM1Q86Y26 1132 aa31.82■■■□□ 2.68
SNF8-213ENST00000514929 CHPF2Q9P2E5 772 aa31.82■■■□□ 2.68
SNF8-213ENST00000514929 SBF1O95248 1867 aa31.82■■■□□ 2.68
SNF8-213ENST00000514929 CACNA1SQ13698 1873 aa31.81■■■□□ 2.68
SNF8-213ENST00000514929 LMNB1P20700 586 aa31.81■■■□□ 2.68
SNF8-213ENST00000514929 SUSD4Q5VX71 490 aa31.81■■■□□ 2.68
SNF8-213ENST00000514929 IBTKQ9P2D0 1353 aaPredicted RBP31.81■■■□□ 2.68
SNF8-213ENST00000514929 ERFEQ4G0M1 354 aa31.8■■■□□ 2.68
SNF8-213ENST00000514929 SENP3-EIF4A1A0A087X0R7 540 aa31.79■■■□□ 2.68
SNF8-213ENST00000514929 NFKBIEO00221 500 aa31.79■■■□□ 2.68
SNF8-213ENST00000514929 PARP10Q53GL7 1025 aa31.79■■■□□ 2.68
SNF8-213ENST00000514929 PPP1R42Q7Z4L9 355 aa31.79■■■□□ 2.68
SNF8-213ENST00000514929 DBF4Q9UBU7 674 aaPredicted RBP31.79■■■□□ 2.68
SNF8-213ENST00000514929 SLX4Q8IY92 1834 aa31.79■■■□□ 2.68
SNF8-213ENST00000514929 ABCC12Q96J65 1359 aa31.79■■■□□ 2.68
SNF8-213ENST00000514929 ARFGEF2Q9Y6D5 1785 aa31.79■■■□□ 2.68
SNF8-213ENST00000514929 HSP90AB3PQ58FF7 597 aa31.77■■■□□ 2.68
SNF8-213ENST00000514929 SOGA3Q5TF21 947 aa31.77■■■□□ 2.68
SNF8-213ENST00000514929 TNRC6CQ9HCJ0 1690 aaKnown RBP31.76■■■□□ 2.68
SNF8-213ENST00000514929 NTSR2O95665 410 aa31.76■■■□□ 2.67
SNF8-213ENST00000514929 PRELPP51888 382 aa31.75■■■□□ 2.67
SNF8-213ENST00000514929 ELL2O00472 640 aaPredicted RBP31.74■■■□□ 2.67
SNF8-213ENST00000514929 KIF3CO14782 793 aa31.74■■■□□ 2.67
SNF8-213ENST00000514929 CCDC27Q2M243 656 aa31.74■■■□□ 2.67
SNF8-213ENST00000514929 KDM2BQ8NHM5 1336 aa31.74■■■□□ 2.67
SNF8-213ENST00000514929 ZC3H4Q9UPT8 1303 aaKnown RBP31.74■■■□□ 2.67
SNF8-213ENST00000514929 ALDH1B1P30837 517 aa31.73■■■□□ 2.67
SNF8-213ENST00000514929 UTP14AQ9BVJ6 771 aaKnown RBP31.73■■■□□ 2.67
SNF8-213ENST00000514929 HYPKQ9NX55 129 aa31.73■■■□□ 2.67
SNF8-213ENST00000514929 FER1L6Q2WGJ9 1857 aa31.73■■■□□ 2.67
SNF8-213ENST00000514929 ANKRD36CQ5JPF3 1778 aa31.73■■■□□ 2.67
SNF8-213ENST00000514929 RIC1Q4ADV7 1423 aa31.73■■■□□ 2.67
SNF8-213ENST00000514929 CRY2Q49AN0 593 aa31.72■■■□□ 2.67
SNF8-213ENST00000514929 TAOK3Q9H2K8 898 aa31.72■■■□□ 2.67
SNF8-213ENST00000514929 NMRK2Q9NPI5 230 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms