RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 USP16Q9Y5T5 823 aa9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 ERBB4Q15303 1308 aa9.79□□□□□ -0.84
HMGXB3-204ENST00000513318 PRAMEF22A3QJZ6 481 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 GABBR2O75899 941 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 CT47B1P0C2W7 299 aaPredicted RBP9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 EXOSC9Q06265 439 aaKnown RBP9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 HDGFL1Q5TGJ6 251 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 C8orf58Q8NAV2 365 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 AK7Q96M32 723 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 SGIP1Q9BQI5 828 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 CCDC87Q9NVE4 849 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 STK32BQ9NY57 414 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 PCDHB8Q9UN66 801 aa9.78□□□□□ -0.84
HMGXB3-204ENST00000513318 ELL2O00472 640 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-204ENST00000513318 NBPF14Q5TI25 921 aa9.77□□□□□ -0.85
HMGXB3-204ENST00000513318 TSPYL6Q8N831 410 aa9.77□□□□□ -0.85
HMGXB3-204ENST00000513318 ANO8Q9HCE9 1232 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-204ENST00000513318 ZBTB1Q9Y2K1 713 aa9.77□□□□□ -0.85
HMGXB3-204ENST00000513318 COL15A1P39059 1388 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 GNPATO15228 680 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 GALR2O43603 387 aaPredicted RBP9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 VAMP4O75379 141 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 RPS6KA4O75676 772 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 EIF2S2P20042 333 aaKnown RBP9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 SSFA2P28290 1259 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 IL6STP40189 918 aaPredicted RBP9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 SLC15A2Q16348 729 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 ZNF827Q17R98 1081 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 CCDC30Q5VVM6 783 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 INTS5Q6P9B9 1019 aaKnown RBP9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 ZNF428Q96B54 188 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 MYH3P11055 1940 aa9.76□□□□□ -0.85
HMGXB3-204ENST00000513318 A1BGP04217 495 aa9.75□□□□□ -0.85
HMGXB3-204ENST00000513318 CLCN6P51797 869 aa9.75□□□□□ -0.85
HMGXB3-204ENST00000513318 NPM2Q86SE8 214 aaKnown RBP9.75□□□□□ -0.85
HMGXB3-204ENST00000513318 FLAD1Q8NFF5 587 aa9.75□□□□□ -0.85
HMGXB3-204ENST00000513318 STK31Q9BXU1 1019 aa9.75□□□□□ -0.85
HMGXB3-204ENST00000513318 DBF4Q9UBU7 674 aaPredicted RBP9.75□□□□□ -0.85
HMGXB3-204ENST00000513318 NBPF26B4DH59 902 aa9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 CANXP27824 592 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 NBPF10Q6P3W6 841 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 NBPF15Q8N660 670 aa9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 DDX21Q9NR30 783 aaKnown RBP eCLIP9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 TFCP2L1Q9NZI6 479 aa9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 PNPLA7Q6ZV29 1317 aa9.74□□□□□ -0.85
HMGXB3-204ENST00000513318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 MYL6BP14649 208 aa9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 PIP4K2AP48426 406 aaPredicted RBP9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 EIF5P55010 431 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 PDIA6Q15084 440 aa9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 ZNF467Q7Z7K2 595 aaPredicted RBP9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 HYPKQ9NX55 129 aa9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 TRPC6Q9Y210 931 aa9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 NRXN2Q9P2S2 1712 aa9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 LAMB2P55268 1798 aa9.73□□□□□ -0.85
HMGXB3-204ENST00000513318 A0A087WZG4 1122 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 PHF14O94880 888 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 ANXA1P04083 346 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 PROSER3Q2NL68 480 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 ALDH1L2Q3SY69 923 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 LRP10Q7Z4F1 713 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 AMIGO3Q86WK7 504 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 KIF13BQ9NQT8 1826 aa9.72□□□□□ -0.85
HMGXB3-204ENST00000513318 RFC4P35249 363 aa9.71□□□□□ -0.86
HMGXB3-204ENST00000513318 KIF6Q6ZMV9 814 aa9.71□□□□□ -0.86
HMGXB3-204ENST00000513318 DZIP3Q86Y13 1208 aaKnown RBP9.71□□□□□ -0.86
HMGXB3-204ENST00000513318 ARHGEF1Q92888 912 aaKnown RBP9.71□□□□□ -0.86
HMGXB3-204ENST00000513318 USP42Q9H9J4 1324 aaKnown RBP9.71□□□□□ -0.86
HMGXB3-204ENST00000513318 TCERG1O14776 1098 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 R3HDM1Q15032 1099 aaKnown RBP9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 COL23A1Q86Y22 540 aaPredicted RBP9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 SLC16A10Q8TF71 515 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 XAGE3Q8WTP9 111 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 SSH1Q8WYL5 1049 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 SMC4Q9NTJ3 1288 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 NARFQ9UHQ1 456 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 MAP3K15Q6ZN16 1313 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 LRP5O75197 1615 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 ANKRD31Q8N7Z5 1873 aa9.7□□□□□ -0.86
HMGXB3-204ENST00000513318 PXDNLA1KZ92 1463 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 ZPR1O75312 459 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 DDX58O95786 925 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 RARSP54136 660 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 FLIIQ13045 1269 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 CACNA1SQ13698 1873 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 SMIM5Q71RC9 77 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 COPS6Q7L5N1 327 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 DDX60Q8IY21 1712 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 MRPL50Q8N5N7 158 aaKnown RBP9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 BCL2L13Q9BXK5 485 aa9.69□□□□□ -0.86
HMGXB3-204ENST00000513318 PHAXQ9H814 394 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms