RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 ZFP42Q96MM3 310 aa9.54□□□□□ -0.88
CHD1-206ENST00000511067 CITED4Q96RK1 184 aa9.54□□□□□ -0.88
CHD1-206ENST00000511067 PARP3Q9Y6F1 533 aa9.54□□□□□ -0.88
CHD1-206ENST00000511067 NDUFB5O43674 189 aa9.53□□□□□ -0.88
CHD1-206ENST00000511067 EIF1AXP47813 144 aaKnown RBP9.53□□□□□ -0.88
CHD1-206ENST00000511067 C6orf118Q5T5N4 469 aa9.53□□□□□ -0.88
CHD1-206ENST00000511067 LYSMD3Q7Z3D4 306 aa9.53□□□□□ -0.88
CHD1-206ENST00000511067 RGL4Q8IZJ4 473 aa9.53□□□□□ -0.88
CHD1-206ENST00000511067 RBCK1Q9BYM8 510 aa9.53□□□□□ -0.88
CHD1-206ENST00000511067 TXLNAP40222 546 aa9.52□□□□□ -0.89
CHD1-206ENST00000511067 DGKZQ13574 1117 aa9.52□□□□□ -0.89
CHD1-206ENST00000511067 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
CHD1-206ENST00000511067 NPAS4Q8IUM7 802 aa9.52□□□□□ -0.89
CHD1-206ENST00000511067 RBM47A0AV96 593 aaKnown RBP9.51□□□□□ -0.89
CHD1-206ENST00000511067 ANKRD33BA6NCL7 494 aa9.51□□□□□ -0.89
CHD1-206ENST00000511067 TERTO14746 1132 aaKnown RBP9.51□□□□□ -0.89
CHD1-206ENST00000511067 TATP17735 454 aaPredicted RBP9.51□□□□□ -0.89
CHD1-206ENST00000511067 NFX1Q12986 1120 aaKnown RBP9.51□□□□□ -0.89
CHD1-206ENST00000511067 COL19A1Q14993 1142 aa9.51□□□□□ -0.89
CHD1-206ENST00000511067 BRPF3Q9ULD4 1205 aa9.51□□□□□ -0.89
CHD1-206ENST00000511067 TTLL8A6PVC2 850 aa9.5□□□□□ -0.89
CHD1-206ENST00000511067 LCE2AQ5TA79 106 aaPredicted RBP9.5□□□□□ -0.89
CHD1-206ENST00000511067 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
CHD1-206ENST00000511067 SOS2Q07890 1332 aaPredicted RBP9.5□□□□□ -0.89
CHD1-206ENST00000511067 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 FZD6O60353 706 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 POU4F2Q12837 409 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 IER5Q5VY09 327 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 PRICKLE2Q7Z3G6 844 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 C7orf43Q8WVR3 580 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 AIDAQ96BJ3 306 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 IFT43Q96FT9 208 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 KLK14Q9P0G3 267 aa9.49□□□□□ -0.89
CHD1-206ENST00000511067 TGFBR3LH3BV60 316 aa9.48□□□□□ -0.89
CHD1-206ENST00000511067 PHKA2P46019 1235 aa9.48□□□□□ -0.89
CHD1-206ENST00000511067 ETFBKMTQ8IXQ9 262 aa9.48□□□□□ -0.89
CHD1-206ENST00000511067 ZBTB39O15060 712 aa9.47□□□□□ -0.89
CHD1-206ENST00000511067 ATP4AP20648 1035 aa9.47□□□□□ -0.89
CHD1-206ENST00000511067 USP5P45974 858 aa9.47□□□□□ -0.89
CHD1-206ENST00000511067 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
CHD1-206ENST00000511067 AAMPQ13685 434 aa9.47□□□□□ -0.89
CHD1-206ENST00000511067 FAM26DQ5JW98 314 aa9.47□□□□□ -0.89
CHD1-206ENST00000511067 SLC16A10Q8TF71 515 aa9.47□□□□□ -0.89
CHD1-206ENST00000511067 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
CHD1-206ENST00000511067 ANKIB1Q9P2G1 1089 aa9.47□□□□□ -0.89
CHD1-206ENST00000511067 NXF1Q9UBU9 619 aaKnown RBP9.47□□□□□ -0.89
CHD1-206ENST00000511067 MZF1P28698 734 aaPredicted RBP9.46□□□□□ -0.9
CHD1-206ENST00000511067 ZAP70P43403 619 aa9.46□□□□□ -0.9
CHD1-206ENST00000511067 PDE3BQ13370 1112 aa9.46□□□□□ -0.9
CHD1-206ENST00000511067 TMC7Q7Z402 723 aa9.46□□□□□ -0.9
CHD1-206ENST00000511067 DMRTB1Q96MA1 342 aa9.46□□□□□ -0.9
CHD1-206ENST00000511067 BCL2L13Q9BXK5 485 aa9.46□□□□□ -0.9
CHD1-206ENST00000511067 TREML1Q86YW5 311 aa9.45□□□□□ -0.9
CHD1-206ENST00000511067 FAM129BQ96TA1 746 aa9.45□□□□□ -0.9
CHD1-206ENST00000511067 TIMMDC1Q9NPL8 285 aa9.45□□□□□ -0.9
CHD1-206ENST00000511067 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
CHD1-206ENST00000511067 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
CHD1-206ENST00000511067 TREHO43280 583 aa9.44□□□□□ -0.9
CHD1-206ENST00000511067 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
CHD1-206ENST00000511067 GJD3Q8N144 294 aa9.44□□□□□ -0.9
CHD1-206ENST00000511067 SUSD3Q96L08 255 aa9.44□□□□□ -0.9
CHD1-206ENST00000511067 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
CHD1-206ENST00000511067 MAN1A2O60476 641 aa9.43□□□□□ -0.9
CHD1-206ENST00000511067 RPLP1P05386 114 aaKnown RBP9.43□□□□□ -0.9
CHD1-206ENST00000511067 PCSK2P16519 638 aa9.43□□□□□ -0.9
CHD1-206ENST00000511067 RHOQP17081 205 aa9.43□□□□□ -0.9
CHD1-206ENST00000511067 MSX1P28360 303 aa9.43□□□□□ -0.9
CHD1-206ENST00000511067 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.43□□□□□ -0.9
CHD1-206ENST00000511067 FBXO33Q7Z6M2 555 aa9.43□□□□□ -0.9
CHD1-206ENST00000511067 ATCAYQ86WG3 371 aa9.43□□□□□ -0.9
CHD1-206ENST00000511067 ZNF428Q96B54 188 aa9.43□□□□□ -0.9
CHD1-206ENST00000511067 ALKBH8Q96BT7 664 aaKnown RBP9.43□□□□□ -0.9
CHD1-206ENST00000511067 SOBPA7XYQ1 873 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 E9PSI1 815 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 MICAL2O94851 1124 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 PDGFAP04085 211 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 ZNF16P17020 682 aaPredicted RBP9.42□□□□□ -0.9
CHD1-206ENST00000511067 FMR1Q06787 632 aaKnown RBP eCLIP9.42□□□□□ -0.9
CHD1-206ENST00000511067 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 GIPC2Q8TF65 315 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 EDEM1Q92611 657 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 ZIC5Q96T25 663 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 CRISPLD1Q9H336 500 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 DMGDHQ9UI17 866 aaKnown RBP9.42□□□□□ -0.9
CHD1-206ENST00000511067 DNMT3LQ9UJW3 386 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 POLIQ9UNA4 740 aa9.42□□□□□ -0.9
CHD1-206ENST00000511067 FIGNL2A6NMB9 653 aa9.41□□□□□ -0.9
CHD1-206ENST00000511067 IGHA2P01877 340 aa9.41□□□□□ -0.9
CHD1-206ENST00000511067 VEGFBP49765 207 aa9.41□□□□□ -0.9
CHD1-206ENST00000511067 EHHADHQ08426 723 aa9.41□□□□□ -0.9
CHD1-206ENST00000511067 ZNF326Q5BKZ1 582 aaKnown RBP9.41□□□□□ -0.9
CHD1-206ENST00000511067 ARSJQ5FYB0 599 aaPredicted RBP9.41□□□□□ -0.9
CHD1-206ENST00000511067 TMC1Q8TDI8 760 aa9.41□□□□□ -0.9
CHD1-206ENST00000511067 NEUROD4Q9HD90 331 aa9.41□□□□□ -0.9
CHD1-206ENST00000511067 FGD1P98174 961 aa9.4□□□□□ -0.9
CHD1-206ENST00000511067 DNM1Q05193 864 aaKnown RBP9.4□□□□□ -0.9
CHD1-206ENST00000511067 DSC3Q14574 896 aa9.4□□□□□ -0.9
CHD1-206ENST00000511067 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.9
CHD1-206ENST00000511067 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.9
CHD1-206ENST00000511067 IRF7Q92985 503 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms