RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 THAP11Q96EK4 314 aa7.34□□□□□ -1.23
NEK1-204ENST00000509912 HINFPQ9BQA5 517 aa7.34□□□□□ -1.23
NEK1-204ENST00000509912 ZNF644Q9H582 1327 aaPredicted RBP7.34□□□□□ -1.23
NEK1-204ENST00000509912 SETD5Q9C0A6 1442 aa7.34□□□□□ -1.23
NEK1-204ENST00000509912 ARID4AP29374 1257 aaPredicted RBP7.34□□□□□ -1.23
NEK1-204ENST00000509912 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
NEK1-204ENST00000509912 WBP1LQ9NX94 342 aa7.34□□□□□ -1.23
NEK1-204ENST00000509912 BRD4O60885 1362 aaPredicted RBP7.34□□□□□ -1.24
NEK1-204ENST00000509912 TOM1O60784 492 aa7.33□□□□□ -1.24
NEK1-204ENST00000509912 GIGYF1O75420 1035 aaPredicted RBP7.33□□□□□ -1.24
NEK1-204ENST00000509912 DESI1Q6ICB0 168 aa7.33□□□□□ -1.24
NEK1-204ENST00000509912 RNF19AQ9NV58 838 aa7.33□□□□□ -1.24
NEK1-204ENST00000509912 PHTF2Q8N3S3 785 aa7.33□□□□□ -1.24
NEK1-204ENST00000509912 NBPF3Q9H094 633 aa7.33□□□□□ -1.24
NEK1-204ENST00000509912 BHMG1C9JSJ3 638 aaPredicted RBP7.32□□□□□ -1.24
NEK1-204ENST00000509912 AGERQ15109 404 aa7.32□□□□□ -1.24
NEK1-204ENST00000509912 TRAF7Q6Q0C0 670 aa7.32□□□□□ -1.24
NEK1-204ENST00000509912 KIF3BO15066 747 aa7.32□□□□□ -1.24
NEK1-204ENST00000509912 RBM47A0AV96 593 aaKnown RBP7.32□□□□□ -1.24
NEK1-204ENST00000509912 CCNYL3P0C7X3 344 aa7.32□□□□□ -1.24
NEK1-204ENST00000509912 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
NEK1-204ENST00000509912 DNAAF2Q9NVR5 837 aaKnown RBP7.32□□□□□ -1.24
NEK1-204ENST00000509912 RIMS2Q9UQ26 1411 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 EMP3P54852 163 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 GTF2IP78347 998 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 OCLNQ16625 522 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 ZBTB33Q86T24 672 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 ARHGAP9Q9BRR9 750 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 USP54Q70EL1 1684 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 CLTCL1P53675 1640 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 NAIPQ13075 1403 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.31□□□□□ -1.24
NEK1-204ENST00000509912 MARF1Q9Y4F3 1742 aaKnown RBP7.31□□□□□ -1.24
NEK1-204ENST00000509912 ZBTB7BO15156 539 aaPredicted RBP7.31□□□□□ -1.24
NEK1-204ENST00000509912 Q3C1V9 767 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 CCDC102BQ68D86 513 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 NPAS4Q8IUM7 802 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 EID1Q9Y6B2 187 aa7.31□□□□□ -1.24
NEK1-204ENST00000509912 PPP4CP60510 307 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 MYO5BQ9ULV0 1848 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 ABCC6O95255 1503 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 JUNDP17535 347 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 SCTRP47872 440 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 PTPRNQ16849 979 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 CLP1Q92989 425 aaKnown RBP7.3□□□□□ -1.24
NEK1-204ENST00000509912 OTUD5Q96G74 571 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 DNMT3AQ9Y6K1 912 aaPredicted RBP7.3□□□□□ -1.24
NEK1-204ENST00000509912 SPATA31A6Q5VVP1 1343 aa7.3□□□□□ -1.24
NEK1-204ENST00000509912 ATP5J2-PTCD1G3V325 749 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 TSNAXIP1Q2TAA8 658 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 EML3Q32P44 896 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 PLEKHM2Q8IWE5 1019 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 GTF3C2Q8WUA4 911 aaPredicted RBP7.29□□□□□ -1.24
NEK1-204ENST00000509912 SPSB2Q99619 263 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 DOLKQ9UPQ8 538 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 ANKRD30BQ9BXX2 1392 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 ST18O60284 1047 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 DKK1O94907 266 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 ANKRD13DQ6ZTN6 518 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 GLYCTKQ8IVS8 523 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 UNC93B1Q9H1C4 597 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 EVA1BQ9NVM1 165 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 FMNL1O95466 1100 aaPredicted RBP7.29□□□□□ -1.24
NEK1-204ENST00000509912 MAPK1P28482 360 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
NEK1-204ENST00000509912 HSPA1LP34931 641 aa7.28□□□□□ -1.24
NEK1-204ENST00000509912 PIP4K2BP78356 416 aa7.28□□□□□ -1.24
NEK1-204ENST00000509912 FKBP5Q13451 457 aaPredicted RBP7.28□□□□□ -1.24
NEK1-204ENST00000509912 TBCELQ5QJ74 424 aa7.28□□□□□ -1.24
NEK1-204ENST00000509912 DZIP3Q86Y13 1208 aaKnown RBP7.28□□□□□ -1.24
NEK1-204ENST00000509912 ROBO1Q9Y6N7 1651 aa7.28□□□□□ -1.24
NEK1-204ENST00000509912 SPATA31E1Q6ZUB1 1445 aa7.28□□□□□ -1.24
NEK1-204ENST00000509912 B4GALNT3Q6L9W6 998 aa7.28□□□□□ -1.24
NEK1-204ENST00000509912 ZNF516Q92618 1163 aa7.28□□□□□ -1.24
NEK1-204ENST00000509912 PHLPP1O60346 1717 aa7.27□□□□□ -1.25
NEK1-204ENST00000509912 FMN2Q9NZ56 1722 aa7.27□□□□□ -1.25
NEK1-204ENST00000509912 ADGRD1Q6QNK2 874 aa7.27□□□□□ -1.25
NEK1-204ENST00000509912 ANKARQ7Z5J8 1434 aa7.27□□□□□ -1.25
NEK1-204ENST00000509912 ADGRL3Q9HAR2 1447 aa7.27□□□□□ -1.25
NEK1-204ENST00000509912 NWD2Q9ULI1 1742 aa7.27□□□□□ -1.25
NEK1-204ENST00000509912 PTK2Q05397 1052 aa7.27□□□□□ -1.25
NEK1-204ENST00000509912 NFATC2IPQ8NCF5 419 aa7.27□□□□□ -1.25
NEK1-204ENST00000509912 CFAP65Q6ZU64 1925 aaKnown RBP7.27□□□□□ -1.25
NEK1-204ENST00000509912 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
NEK1-204ENST00000509912 BAP1Q92560 729 aa7.26□□□□□ -1.25
NEK1-204ENST00000509912 ERFEQ4G0M1 354 aa7.26□□□□□ -1.25
NEK1-204ENST00000509912 NOD1Q9Y239 953 aa7.26□□□□□ -1.25
NEK1-204ENST00000509912 EIF3AQ14152 1382 aaKnown RBP7.26□□□□□ -1.25
NEK1-204ENST00000509912 TCF3P15923 654 aa7.26□□□□□ -1.25
NEK1-204ENST00000509912 ECM1Q16610 540 aa7.26□□□□□ -1.25
NEK1-204ENST00000509912 SETDB2Q96T68 719 aa7.26□□□□□ -1.25
NEK1-204ENST00000509912 ABCC11Q96J66 1382 aa7.25□□□□□ -1.25
NEK1-204ENST00000509912 CXXC1Q9P0U4 656 aaPredicted RBP7.25□□□□□ -1.25
NEK1-204ENST00000509912 PCDHB11Q9Y5F2 797 aa7.25□□□□□ -1.25
NEK1-204ENST00000509912 SEC13P55735 322 aa7.25□□□□□ -1.25
NEK1-204ENST00000509912 NKX2-3Q8TAU0 364 aa7.25□□□□□ -1.25
NEK1-204ENST00000509912 ARHGAP4P98171 946 aa7.24□□□□□ -1.25
NEK1-204ENST00000509912 PDXDC2PQ6P474 469 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms