RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 WWC3Q9ULE0 1092 aa21.19■□□□□ 0.98
SKP2-205ENST00000509692 PXDNLA1KZ92 1463 aa21.19■□□□□ 0.98
SKP2-205ENST00000509692 NRXN2Q9P2S2 1712 aa21.19■□□□□ 0.98
SKP2-205ENST00000509692 A0A0G2JLW4 131 aa21.17■□□□□ 0.98
SKP2-205ENST00000509692 SERPINB2P05120 415 aa21.17■□□□□ 0.98
SKP2-205ENST00000509692 TGFB2P61812 414 aa21.17■□□□□ 0.98
SKP2-205ENST00000509692 EIF2S2P20042 333 aaKnown RBP21.16■□□□□ 0.98
SKP2-205ENST00000509692 DUSP27Q5VZP5 1158 aa21.16■□□□□ 0.98
SKP2-205ENST00000509692 C8orf58Q8NAV2 365 aa21.16■□□□□ 0.98
SKP2-205ENST00000509692 MYL6BP14649 208 aa21.15■□□□□ 0.98
SKP2-205ENST00000509692 TRMT2AQ8IZ69 625 aaKnown RBP21.15■□□□□ 0.98
SKP2-205ENST00000509692 CHD4Q14839 1912 aa21.15■□□□□ 0.98
SKP2-205ENST00000509692 ELL2O00472 640 aaPredicted RBP21.15■□□□□ 0.98
SKP2-205ENST00000509692 DPEP1P16444 411 aa21.15■□□□□ 0.98
SKP2-205ENST00000509692 EXOSC9Q06265 439 aaKnown RBP21.15■□□□□ 0.98
SKP2-205ENST00000509692 PDIA6Q15084 440 aa21.15■□□□□ 0.98
SKP2-205ENST00000509692 HOXB7P09629 217 aa21.14■□□□□ 0.97
SKP2-205ENST00000509692 TSPYL6Q8N831 410 aa21.14■□□□□ 0.97
SKP2-205ENST00000509692 BRCA1P38398 1863 aaKnown RBP21.13■□□□□ 0.97
SKP2-205ENST00000509692 ERBB4Q15303 1308 aa21.13■□□□□ 0.97
SKP2-205ENST00000509692 KCNA3P22001 575 aa21.13■□□□□ 0.97
SKP2-205ENST00000509692 HLFQ16534 295 aa21.13■□□□□ 0.97
SKP2-205ENST00000509692 PROSER3Q2NL68 480 aa21.13■□□□□ 0.97
SKP2-205ENST00000509692 CLEC4GQ6UXB4 293 aa21.13■□□□□ 0.97
SKP2-205ENST00000509692 TTLL7Q6ZT98 887 aa21.13■□□□□ 0.97
SKP2-205ENST00000509692 LRP10Q7Z4F1 713 aa21.13■□□□□ 0.97
SKP2-205ENST00000509692 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
SKP2-205ENST00000509692 ANXA1P04083 346 aa21.12■□□□□ 0.97
SKP2-205ENST00000509692 SETDB2Q96T68 719 aa21.12■□□□□ 0.97
SKP2-205ENST00000509692 YY1P25490 414 aa21.11■□□□□ 0.97
SKP2-205ENST00000509692 TWISTNBQ3B726 338 aaPredicted RBP21.11■□□□□ 0.97
SKP2-205ENST00000509692 CARMIL3Q8ND23 1372 aa21.11■□□□□ 0.97
SKP2-205ENST00000509692 GRIN3BO60391 1043 aa21.11■□□□□ 0.97
SKP2-205ENST00000509692 CHRNA5P30532 468 aa21.11■□□□□ 0.97
SKP2-205ENST00000509692 ZNF652Q9Y2D9 606 aa21.11■□□□□ 0.97
SKP2-205ENST00000509692 NUP98P52948 1817 aa21.1■□□□□ 0.97
SKP2-205ENST00000509692 RGL2O15211 777 aa21.1■□□□□ 0.97
SKP2-205ENST00000509692 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
SKP2-205ENST00000509692 PRR5LQ6MZQ0 368 aa21.1■□□□□ 0.97
SKP2-205ENST00000509692 CCDC24Q8N4L8 307 aa21.1■□□□□ 0.97
SKP2-205ENST00000509692 ANKRD31Q8N7Z5 1873 aa21.09■□□□□ 0.97
SKP2-205ENST00000509692 MAP3K15Q6ZN16 1313 aa21.09■□□□□ 0.97
SKP2-205ENST00000509692 ERVV-1B6SEH8 477 aa21.08■□□□□ 0.97
SKP2-205ENST00000509692 VAMP4O75379 141 aa21.07■□□□□ 0.96
SKP2-205ENST00000509692 KIF6Q6ZMV9 814 aa21.07■□□□□ 0.96
SKP2-205ENST00000509692 ZBTB3Q9H5J0 574 aa21.07■□□□□ 0.96
SKP2-205ENST00000509692 NIP7Q9Y221 180 aaKnown RBP eCLIP21.07■□□□□ 0.96
SKP2-205ENST00000509692 CHMP4AQ9BY43 222 aa21.07■□□□□ 0.96
SKP2-205ENST00000509692 BCS1LQ9Y276 419 aa21.07■□□□□ 0.96
SKP2-205ENST00000509692 DDX21Q9NR30 783 aaKnown RBP eCLIP21.06■□□□□ 0.96
SKP2-205ENST00000509692 PIM2Q9P1W9 311 aa21.06■□□□□ 0.96
SKP2-205ENST00000509692 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
SKP2-205ENST00000509692 CCDC30Q5VVM6 783 aa21.05■□□□□ 0.96
SKP2-205ENST00000509692 CNBD1Q8NA66 436 aa21.05■□□□□ 0.96
SKP2-205ENST00000509692 COPS6Q7L5N1 327 aa21.04■□□□□ 0.96
SKP2-205ENST00000509692 NBPF5PQ86XG9 351 aaPredicted RBP21.04■□□□□ 0.96
SKP2-205ENST00000509692 DLEC1Q9Y238 1755 aa21.04■□□□□ 0.96
SKP2-205ENST00000509692 CACNA1FO60840 1977 aa21.04■□□□□ 0.96
SKP2-205ENST00000509692 XAGE3Q8WTP9 111 aa21.04■□□□□ 0.96
SKP2-205ENST00000509692 BRIP1Q9BX63 1249 aa21.04■□□□□ 0.96
SKP2-205ENST00000509692 ARFGEF1Q9Y6D6 1849 aa21.03■□□□□ 0.96
SKP2-205ENST00000509692 FAM177BA6PVY3 158 aa21.03■□□□□ 0.96
SKP2-205ENST00000509692 AIMP1Q12904 312 aaKnown RBP21.03■□□□□ 0.96
SKP2-205ENST00000509692 C2CD5Q86YS7 1000 aa21.03■□□□□ 0.96
SKP2-205ENST00000509692 DBF4Q9UBU7 674 aaPredicted RBP21.03■□□□□ 0.96
SKP2-205ENST00000509692 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
SKP2-205ENST00000509692 NPHP1O15259 732 aa21.02■□□□□ 0.96
SKP2-205ENST00000509692 CT47B1P0C2W7 299 aaPredicted RBP21.02■□□□□ 0.96
SKP2-205ENST00000509692 DALRD3Q5D0E6 543 aaKnown RBP21.02■□□□□ 0.96
SKP2-205ENST00000509692 GIGYF2Q6Y7W6 1299 aaKnown RBP21.02■□□□□ 0.96
SKP2-205ENST00000509692 COL11A2P13942 1736 aaPredicted RBP21.02■□□□□ 0.95
SKP2-205ENST00000509692 TCERG1O14776 1098 aaKnown RBP21.01■□□□□ 0.95
SKP2-205ENST00000509692 GPTP24298 496 aa21.01■□□□□ 0.95
SKP2-205ENST00000509692 ST5P78524 1137 aa21.01■□□□□ 0.95
SKP2-205ENST00000509692 STK31Q9BXU1 1019 aa21.01■□□□□ 0.95
SKP2-205ENST00000509692 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
SKP2-205ENST00000509692 H0YIN7 160 aa21■□□□□ 0.95
SKP2-205ENST00000509692 PDE6BP35913 854 aa21■□□□□ 0.95
SKP2-205ENST00000509692 TPTE2Q6XPS3 522 aa21■□□□□ 0.95
SKP2-205ENST00000509692 ZNF34Q8IZ26 560 aa21■□□□□ 0.95
SKP2-205ENST00000509692 ZNF428Q96B54 188 aa20.99■□□□□ 0.95
SKP2-205ENST00000509692 HYPKQ9NX55 129 aa20.99■□□□□ 0.95
SKP2-205ENST00000509692 SUSD4Q5VX71 490 aa20.98■□□□□ 0.95
SKP2-205ENST00000509692 SLC4A2P04920 1241 aa20.97■□□□□ 0.95
SKP2-205ENST00000509692 ARHGAP27Q6ZUM4 889 aa20.97■□□□□ 0.95
SKP2-205ENST00000509692 NUTM1Q86Y26 1132 aa20.97■□□□□ 0.95
SKP2-205ENST00000509692 ANKRD36CQ5JPF3 1778 aa20.97■□□□□ 0.95
SKP2-205ENST00000509692 TTLL6Q8N841 843 aa20.96■□□□□ 0.95
SKP2-205ENST00000509692 PDZRN3Q9UPQ7 1066 aa20.96■□□□□ 0.95
SKP2-205ENST00000509692 SRGNP10124 158 aa20.96■□□□□ 0.95
SKP2-205ENST00000509692 ZNF622Q969S3 477 aaKnown RBP eCLIP20.96■□□□□ 0.95
SKP2-205ENST00000509692 NYXQ9GZU5 481 aa20.96■□□□□ 0.95
SKP2-205ENST00000509692 ABCC12Q96J65 1359 aa20.95■□□□□ 0.94
SKP2-205ENST00000509692 KLRG2A4D1S0 409 aaPredicted RBP20.95■□□□□ 0.94
SKP2-205ENST00000509692 ALDH1L2Q3SY69 923 aa20.95■□□□□ 0.94
SKP2-205ENST00000509692 ERFEQ4G0M1 354 aa20.95■□□□□ 0.94
SKP2-205ENST00000509692 ANKRD13DQ6ZTN6 518 aa20.95■□□□□ 0.94
SKP2-205ENST00000509692 ZNF784Q8NCA9 323 aaPredicted RBP20.95■□□□□ 0.94
SKP2-205ENST00000509692 PHAXQ9H814 394 aaKnown RBP20.95■□□□□ 0.94
SKP2-205ENST00000509692 NTSR2O95665 410 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms