RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 HSP90AB1P08238 724 aaKnown RBP9.62□□□□□ -0.87
TOPBP1-207ENST00000509162 PTGER2P43116 358 aa9.62□□□□□ -0.87
TOPBP1-207ENST00000509162 BCORQ6W2J9 1755 aa9.61□□□□□ -0.87
TOPBP1-207ENST00000509162 PRAMEF22A3QJZ6 481 aa9.61□□□□□ -0.87
TOPBP1-207ENST00000509162 GNAT3A8MTJ3 354 aa9.61□□□□□ -0.87
TOPBP1-207ENST00000509162 CABP4P57796 275 aa9.61□□□□□ -0.87
TOPBP1-207ENST00000509162 NFE2L2Q16236 605 aa9.61□□□□□ -0.87
TOPBP1-207ENST00000509162 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
TOPBP1-207ENST00000509162 NUDCQ9Y266 331 aa9.61□□□□□ -0.87
TOPBP1-207ENST00000509162 RRP7AQ9Y3A4 280 aaKnown RBP9.61□□□□□ -0.87
TOPBP1-207ENST00000509162 SENP3-EIF4A1A0A087X0R7 540 aa9.6□□□□□ -0.87
TOPBP1-207ENST00000509162 ZBTB7AO95365 584 aa9.6□□□□□ -0.87
TOPBP1-207ENST00000509162 COL23A1Q86Y22 540 aaPredicted RBP9.6□□□□□ -0.87
TOPBP1-207ENST00000509162 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
TOPBP1-207ENST00000509162 STK32BQ9NY57 414 aa9.6□□□□□ -0.87
TOPBP1-207ENST00000509162 CNTNAP4Q9C0A0 1308 aa9.59□□□□□ -0.87
TOPBP1-207ENST00000509162 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
TOPBP1-207ENST00000509162 SMARCC1Q92922 1105 aaPredicted RBP9.59□□□□□ -0.87
TOPBP1-207ENST00000509162 ZNF496Q96IT1 587 aaPredicted RBP9.59□□□□□ -0.87
TOPBP1-207ENST00000509162 HEG1Q9ULI3 1381 aa9.59□□□□□ -0.87
TOPBP1-207ENST00000509162 ATP6V1AP38606 617 aa9.58□□□□□ -0.88
TOPBP1-207ENST00000509162 TMPOP42166 694 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-207ENST00000509162 INTS5Q6P9B9 1019 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-207ENST00000509162 PNISRQ8TF01 805 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-207ENST00000509162 CYP19A1P11511 503 aaPredicted RBP9.57□□□□□ -0.88
TOPBP1-207ENST00000509162 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
TOPBP1-207ENST00000509162 MS4A4AQ96JQ5 239 aa9.57□□□□□ -0.88
TOPBP1-207ENST00000509162 MIS18AQ9NYP9 233 aa9.57□□□□□ -0.88
TOPBP1-207ENST00000509162 ZBTB1Q9Y2K1 713 aa9.57□□□□□ -0.88
TOPBP1-207ENST00000509162 SOS1Q07889 1333 aaPredicted RBP9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 GNPATO15228 680 aa9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 PHF14O94880 888 aa9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 CRKLP46109 303 aaKnown RBP9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 MSL1Q68DK7 614 aa9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 ZNF790Q6PG37 636 aa9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 NRXN2Q9P2S2 1712 aa9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 MAPK8IP3Q9UPT6 1336 aa9.56□□□□□ -0.88
TOPBP1-207ENST00000509162 KIF13BQ9NQT8 1826 aa9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 HTATSF1O43719 755 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 MMRN1Q13201 1228 aa9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 KRT24Q2M2I5 525 aa9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 MICALL2Q8IY33 904 aa9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 RUNDC1Q96C34 613 aa9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 MRS2Q9HD23 443 aa9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 TFCP2L1Q9NZI6 479 aa9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 SRP68Q9UHB9 627 aaKnown RBP9.55□□□□□ -0.88
TOPBP1-207ENST00000509162 COL15A1P39059 1388 aa9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 APAF1O14727 1248 aa9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 SSFA2P28290 1259 aa9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 PIP4K2AP48426 406 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 TEFQ10587 303 aa9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 WDR43Q15061 677 aaKnown RBP eCLIP9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 AK7Q96M32 723 aa9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 MTFR1LQ9H019 292 aa9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 BCL2L12Q9HB09 334 aa9.54□□□□□ -0.88
TOPBP1-207ENST00000509162 COL11A2P13942 1736 aaPredicted RBP9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 NBPF26B4DH59 902 aa9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 ANP32CO43423 234 aa9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 RIPK4P57078 832 aa9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 NBPF10Q6P3W6 841 aaKnown RBP9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 NBPF15Q8N660 670 aa9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 CCDC87Q9NVE4 849 aa9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 C10orf71Q711Q0 1435 aa9.53□□□□□ -0.88
TOPBP1-207ENST00000509162 CARMIL3Q8ND23 1372 aa9.52□□□□□ -0.88
TOPBP1-207ENST00000509162 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 RPS6KA4O75676 772 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 GYS1P13807 737 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 EIF4A1P60842 406 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 DDR1Q08345 913 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 RC3H1Q5TC82 1133 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 LRP10Q7Z4F1 713 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 ANKRD31Q8N7Z5 1873 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 SPON1Q9HCB6 807 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 USP16Q9Y5T5 823 aa9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 USP42Q9H9J4 1324 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-207ENST00000509162 TNRC6CQ9HCJ0 1690 aaKnown RBP9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 BRCA1P38398 1863 aaKnown RBP9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 A1BGP04217 495 aa9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 ZNF853P0CG23 659 aa9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 EIF5P55010 431 aaKnown RBP9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 NEUROD2Q15784 382 aa9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 TMEM132AQ24JP5 1023 aa9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 NLGN2Q8NFZ4 835 aa9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 MFRPQ9BY79 579 aa9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 PXDNLA1KZ92 1463 aa9.51□□□□□ -0.89
TOPBP1-207ENST00000509162 TAF7Q15545 349 aaPredicted RBP9.5□□□□□ -0.89
TOPBP1-207ENST00000509162 PROSER3Q2NL68 480 aa9.5□□□□□ -0.89
TOPBP1-207ENST00000509162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
TOPBP1-207ENST00000509162 RTF1Q92541 710 aaKnown RBP9.5□□□□□ -0.89
TOPBP1-207ENST00000509162 FMNL2Q96PY5 1086 aa9.5□□□□□ -0.89
TOPBP1-207ENST00000509162 FHDC1Q9C0D6 1143 aaPredicted RBP9.5□□□□□ -0.89
TOPBP1-207ENST00000509162 CHL1O00533 1208 aa9.49□□□□□ -0.89
TOPBP1-207ENST00000509162 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
TOPBP1-207ENST00000509162 TTC5Q8N0Z6 440 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms