RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 KIAA1024Q9UPX6 916 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 RBM19Q9Y4C8 960 aaKnown RBP3.16□□□□□ -1.9
SMN2-208ENST00000508258 HRH3Q9Y5N1 445 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 PARP3Q9Y6F1 533 aa3.16□□□□□ -1.9
SMN2-208ENST00000508258 TMEM229AB2RXF0 380 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 CDK2AP1O14519 115 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 KHNYNO15037 678 aaKnown RBP3.15□□□□□ -1.91
SMN2-208ENST00000508258 ATXN7O15265 892 aaPredicted RBP3.15□□□□□ -1.91
SMN2-208ENST00000508258 THBS1P07996 1170 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 FGFR3P22607 806 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 ATP2B4P23634 1241 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 LBRQ14739 615 aaKnown RBP3.15□□□□□ -1.91
SMN2-208ENST00000508258 OCLNQ16625 522 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 TBCELQ5QJ74 424 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 GALNT6Q8NCL4 622 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 ACDQ96AP0 544 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 OXCT2Q9BYC2 517 aaPredicted RBP3.15□□□□□ -1.91
SMN2-208ENST00000508258 ZNF358Q9NW07 568 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 ATXN7L1Q9ULK2 861 aaPredicted RBP3.15□□□□□ -1.91
SMN2-208ENST00000508258 PCDHGA11Q9Y5H2 935 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 CNTNAP5Q8WYK1 1306 aa3.15□□□□□ -1.91
SMN2-208ENST00000508258 A0A1W2PNR3 127 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 SOWAHDA6NJG2 315 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 PHF20L1A8MW92 1017 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 BNIP3LO60238 219 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 ATP4AP20648 1035 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 RBM25P49756 843 aaKnown RBP3.14□□□□□ -1.91
SMN2-208ENST00000508258 SEC13P55735 322 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 NOM1Q5C9Z4 860 aaKnown RBP3.14□□□□□ -1.91
SMN2-208ENST00000508258 GPAT2Q6NUI2 795 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 KANK3Q6NY19 840 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 DNAJC14Q6Y2X3 702 aaPredicted RBP3.14□□□□□ -1.91
SMN2-208ENST00000508258 TNS4Q8IZW8 715 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 BEND7Q8N7W2 519 aaPredicted RBP3.14□□□□□ -1.91
SMN2-208ENST00000508258 TPCN2Q8NHX9 752 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 L3MBTL2Q969R5 705 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 KLRG1Q96E93 195 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 ZNF594Q96JF6 807 aaPredicted RBP3.14□□□□□ -1.91
SMN2-208ENST00000508258 ZCCHC2Q9C0B9 1178 aaKnown RBP3.14□□□□□ -1.91
SMN2-208ENST00000508258 CRISPLD1Q9H336 500 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 CHMP3Q9Y3E7 222 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 PCDHGC4Q9Y5F7 938 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 USP3Q9Y6I4 520 aa3.14□□□□□ -1.91
SMN2-208ENST00000508258 DNMT3AQ9Y6K1 912 aaPredicted RBP3.14□□□□□ -1.91
SMN2-208ENST00000508258 SFI1A8K8P3 1242 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 OIP5O43482 229 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 ERCC3P19447 782 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 CD33P20138 364 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 SCNN1AP37088 669 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 SERPINB4P48594 390 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 CTBSQ01459 385 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 CCDC102BQ68D86 513 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 NLRP8Q86W28 1048 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 SLC9A9Q8IVB4 645 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 GOLGA6L1Q8N7Z2 621 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 RHPN1Q8TCX5 695 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 EDARADDQ8WWZ3 215 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 SLC4A9Q96Q91 983 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 CXXC1Q9P0U4 656 aaPredicted RBP3.13□□□□□ -1.91
SMN2-208ENST00000508258 SCHIP1Q9P0W5 487 aaPredicted RBP3.13□□□□□ -1.91
SMN2-208ENST00000508258 GGA1Q9UJY5 639 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 GDF2Q9UK05 429 aaPredicted RBP3.13□□□□□ -1.91
SMN2-208ENST00000508258 PRR12Q9ULL5 1215 aa3.13□□□□□ -1.91
SMN2-208ENST00000508258 RBM47A0AV96 593 aaKnown RBP3.12□□□□□ -1.91
SMN2-208ENST00000508258 SERTM1A2A2V5 107 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 NEURL1BA8MQ27 555 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 SHISA8B8ZZ34 492 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 E9PSI1 815 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 M0R2N6 131 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 C2CD2LO14523 706 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 MAPTP10636 758 aaKnown RBP3.12□□□□□ -1.91
SMN2-208ENST00000508258 NOS2P35228 1153 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 TXLNAP40222 546 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 SNRPNP63162 240 aaKnown RBP3.12□□□□□ -1.91
SMN2-208ENST00000508258 UBAP2LQ14157 1087 aaKnown RBP3.12□□□□□ -1.91
SMN2-208ENST00000508258 MTFR1Q15390 333 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 LRRC69Q6ZNQ3 347 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 CHMP7Q8WUX9 453 aaPredicted RBP3.12□□□□□ -1.91
SMN2-208ENST00000508258 ZIC5Q96T25 663 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 HINFPQ9BQA5 517 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 ZDHHC3Q9NYG2 299 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 EGFL7Q9UHF1 273 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 MKL2Q9ULH7 1088 aa3.12□□□□□ -1.91
SMN2-208ENST00000508258 IQSEC3Q9UPP2 1182 aaPredicted RBP3.12□□□□□ -1.91
SMN2-208ENST00000508258 UNCXA6NJT0 531 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 PPP1R12BO60237 982 aaPredicted RBP3.11□□□□□ -1.91
SMN2-208ENST00000508258 PRMT3O60678 531 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 ADH6P28332 368 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 WEE1P30291 646 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 GSK3AP49840 483 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 PCBP4P57723 403 aaKnown RBP3.11□□□□□ -1.91
SMN2-208ENST00000508258 GRIN2CQ14957 1233 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 ECM1Q16610 540 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 SH3PXD2AQ5TCZ1 1133 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 SLCO4C1Q6ZQN7 724 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 C1orf229Q6ZS94 237 aaPredicted RBP3.11□□□□□ -1.91
SMN2-208ENST00000508258 TSEN2Q8NCE0 465 aaKnown RBP3.11□□□□□ -1.91
SMN2-208ENST00000508258 NGLY1Q96IV0 654 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 PRIMPOLQ96LW4 560 aa3.11□□□□□ -1.91
SMN2-208ENST00000508258 TSPAN10Q9H1Z9 355 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms