RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 RGL3Q3MIN7 710 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 CC2D1BQ5T0F9 858 aaKnown RBP9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 TMC7Q7Z402 723 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 VPS37DQ86XT2 251 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 VPS37AQ8NEZ2 397 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 TAGLN3Q9UI15 199 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 RABGAP1Q9Y3P9 1069 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 PCDHB15Q9Y5E8 787 aa9.21□□□□□ -0.93
PDGFRA-206ENST00000508170 SCGB1D2O95969 90 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 CHMP4BP1P59074 171 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 IRX3P78415 501 aaPredicted RBP9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 PSMD2Q13200 908 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 Q3C1V9 767 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 NBPF6Q5VWK0 638 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 PODNQ7Z5L7 613 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 KIAA0907Q7Z7F0 614 aaPredicted RBP9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 CHCHD4Q8N4Q1 142 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 KIAA1958Q8N8K9 716 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 SH3TC2Q8TF17 1288 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 NBPF4Q96M43 638 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 DNAJC25Q9H1X3 360 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 ZNF69Q9UC07 566 aa9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 EVLQ9UI08 416 aaPredicted RBP9.21□□□□□ -0.94
PDGFRA-206ENST00000508170 ATF3P18847 181 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 ATICP31939 592 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 FLT3P36888 993 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 DAB2P98082 770 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 TTF1Q15361 905 aaPredicted RBP9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 SLC4A8Q2Y0W8 1093 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 CCDC70Q6NSX1 233 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 ERAP2Q6P179 960 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 FAM126AQ9BYI3 521 aaPredicted RBP9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 CNTN3Q9P232 1028 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 SYNRGQ9UMZ2 1314 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 SMAPO00193 183 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 MTA2O94776 668 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 LDHBP07195 334 aaKnown RBP9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 ATF4P18848 351 aaPredicted RBP9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 FMR1Q06787 632 aaKnown RBP eCLIP9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 HSP90AB3PQ58FF7 597 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 ARSHQ5FYA8 562 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 ARMC3Q5W041 872 aa9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 LARP1BQ659C4 914 aaKnown RBP9.2□□□□□ -0.94
PDGFRA-206ENST00000508170 SCRIBQ14160 1630 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 GEMIN4P57678 1058 aaKnown RBP9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 GPSM2P81274 684 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 SWI5Q1ZZU3 235 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 KSR2Q6VAB6 950 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 ZNF654Q8IZM8 581 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 CABLES1Q8TDN4 633 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 SNTG2Q9NY99 539 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 GJA3Q9Y6H8 435 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 USP17L5A8MUK1 530 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 PRPF40AO75400 957 aaKnown RBP9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 CLK1P49759 484 aaKnown RBP9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 EPHB1P54762 984 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 TTC14Q96N46 770 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 CDHR5Q9HBB8 845 aa9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 NPDC1Q9NQX5 325 aaPredicted RBP9.19□□□□□ -0.94
PDGFRA-206ENST00000508170 MOXD2PA6NHM9 499 aa9.18□□□□□ -0.94
PDGFRA-206ENST00000508170 NUTM2BA6NNL0 878 aaPredicted RBP9.18□□□□□ -0.94
PDGFRA-206ENST00000508170 NUTM2EB1AL46 878 aaPredicted RBP9.18□□□□□ -0.94
PDGFRA-206ENST00000508170 CAPN15O75808 1086 aa9.18□□□□□ -0.94
PDGFRA-206ENST00000508170 NUTM2DQ5VT03 806 aaPredicted RBP9.18□□□□□ -0.94
PDGFRA-206ENST00000508170 NBPF5PQ86XG9 351 aaPredicted RBP9.18□□□□□ -0.94
PDGFRA-206ENST00000508170 NUTM2AQ8IVF1 878 aaPredicted RBP9.18□□□□□ -0.94
PDGFRA-206ENST00000508170 EPS8L1Q8TE68 723 aa9.18□□□□□ -0.94
PDGFRA-206ENST00000508170 HMMRO75330 724 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 RASA1P20936 1047 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 PEX19P40855 299 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 PSMC1P62191 440 aaKnown RBP9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 MSL1Q68DK7 614 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 APPBP2Q92624 585 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 CCDC47Q96A33 483 aaKnown RBP9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 ESYT3A0FGR9 886 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 SHTN1A0MZ66 631 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 RAPGEF3O95398 923 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 FMNL1O95466 1100 aaPredicted RBP9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 GJC2Q5T442 439 aaPredicted RBP9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 CYLDQ9NQC7 956 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 ACAD8Q9UKU7 415 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 ATP8A1Q9Y2Q0 1164 aa9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 DNMT3AQ9Y6K1 912 aaPredicted RBP9.17□□□□□ -0.94
PDGFRA-206ENST00000508170 FAM221BA6H8Z2 402 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 TREHO43280 583 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 RPN1P04843 607 aaKnown RBP9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 ZBED6P86452 979 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 CTDSPL2Q05D32 466 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 RELL1Q8IUW5 271 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 LUZP4Q9P127 313 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 A0A1W2PRQ8 180 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 RASA3Q14644 834 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 ALFQ53S48 1182 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 LARP1Q6PKG0 1096 aaKnown RBP9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
PDGFRA-206ENST00000508170 SPICE1Q8N0Z3 855 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms