RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 ZNF295-AS1Q8N0V1 137 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 TMEM151AQ8N4L1 468 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 EDARADDQ8WWZ3 215 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 GTF3C3Q9Y5Q9 886 aa8.09□□□□□ -1.11
CALCOCO2-208ENST00000506971 OIP5O43482 229 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 PCBP4P57723 403 aaKnown RBP8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 TNP2Q05952 138 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 ANKMY2Q8IV38 441 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 KCTD17Q8N5Z5 321 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 GOLGA6L1Q8N7Z2 621 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 VTI1AQ96AJ9 217 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 HSH2DQ96JZ2 352 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 CEP63Q96MT8 703 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 MARK1Q9P0L2 795 aa8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 GDF2Q9UK05 429 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO2-208ENST00000506971 EML1O00423 815 aa8.07□□□□□ -1.12
CALCOCO2-208ENST00000506971 PTK7Q13308 1070 aa8.07□□□□□ -1.12
CALCOCO2-208ENST00000506971 BEND7Q8N7W2 519 aaPredicted RBP8.07□□□□□ -1.12
CALCOCO2-208ENST00000506971 ZMYND15Q9H091 742 aa8.07□□□□□ -1.12
CALCOCO2-208ENST00000506971 NDFIP2Q9NV92 336 aa8.07□□□□□ -1.12
CALCOCO2-208ENST00000506971 PHF20L1A8MW92 1017 aa8.06□□□□□ -1.12
CALCOCO2-208ENST00000506971 M0R2N6 131 aa8.06□□□□□ -1.12
CALCOCO2-208ENST00000506971 KCNMA1Q12791 1236 aa8.06□□□□□ -1.12
CALCOCO2-208ENST00000506971 ALDH16A1Q8IZ83 802 aa8.06□□□□□ -1.12
CALCOCO2-208ENST00000506971 FAM200AQ8TCP9 573 aa8.06□□□□□ -1.12
CALCOCO2-208ENST00000506971 STRN4Q9NRL3 753 aa8.06□□□□□ -1.12
CALCOCO2-208ENST00000506971 SHISA8B8ZZ34 492 aa8.05□□□□□ -1.12
CALCOCO2-208ENST00000506971 CFAP70Q5T0N1 1121 aa8.05□□□□□ -1.12
CALCOCO2-208ENST00000506971 C1orf229Q6ZS94 237 aaPredicted RBP8.05□□□□□ -1.12
CALCOCO2-208ENST00000506971 ANKIB1Q9P2G1 1089 aa8.05□□□□□ -1.12
CALCOCO2-208ENST00000506971 ARID3CA6NKF2 412 aa8.04□□□□□ -1.12
CALCOCO2-208ENST00000506971 FAM196BA6NMK8 535 aa8.04□□□□□ -1.12
CALCOCO2-208ENST00000506971 FAM157BP0CG42 384 aa8.04□□□□□ -1.12
CALCOCO2-208ENST00000506971 TBC1D8BQ0IIM8 1120 aa8.04□□□□□ -1.12
CALCOCO2-208ENST00000506971 RAB44Q7Z6P3 723 aaPredicted RBP8.04□□□□□ -1.12
CALCOCO2-208ENST00000506971 ZNF280CQ8ND82 737 aa8.04□□□□□ -1.12
CALCOCO2-208ENST00000506971 CCDC97Q96F63 343 aaPredicted RBP8.04□□□□□ -1.12
CALCOCO2-208ENST00000506971 IGFLR1Q9H665 355 aa8.04□□□□□ -1.12
CALCOCO2-208ENST00000506971 NISCHQ9Y2I1 1504 aa8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 C21orf2O43822 256 aa8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 DKK1O94907 266 aa8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 ARAFP10398 606 aa8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 ADH6P28332 368 aa8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 SFSWAPQ12872 951 aaKnown RBP8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 GRIN2CQ14957 1233 aa8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 SUSD3Q96L08 255 aa8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 BRD7Q9NPI1 651 aa8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
CALCOCO2-208ENST00000506971 SNRPNP63162 240 aaKnown RBP8.02□□□□□ -1.13
CALCOCO2-208ENST00000506971 C1orf53Q5VUE5 145 aa8.02□□□□□ -1.13
CALCOCO2-208ENST00000506971 KANK3Q6NY19 840 aa8.02□□□□□ -1.13
CALCOCO2-208ENST00000506971 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.01□□□□□ -1.13
CALCOCO2-208ENST00000506971 NEUROD1Q13562 356 aa8.01□□□□□ -1.13
CALCOCO2-208ENST00000506971 SAMD5Q5TGI4 173 aa8.01□□□□□ -1.13
CALCOCO2-208ENST00000506971 GPAT2Q6NUI2 795 aa8.01□□□□□ -1.13
CALCOCO2-208ENST00000506971 SLCO4C1Q6ZQN7 724 aa8.01□□□□□ -1.13
CALCOCO2-208ENST00000506971 SYT9Q86SS6 491 aa8.01□□□□□ -1.13
CALCOCO2-208ENST00000506971 C2orf49Q9BVC5 232 aaPredicted RBP8.01□□□□□ -1.13
CALCOCO2-208ENST00000506971 MKL2Q9ULH7 1088 aa8.01□□□□□ -1.13
CALCOCO2-208ENST00000506971 BTBD6Q96KE9 485 aa8□□□□□ -1.13
CALCOCO2-208ENST00000506971 PRIMPOLQ96LW4 560 aa8□□□□□ -1.13
CALCOCO2-208ENST00000506971 PRMT3O60678 531 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 EPXP11678 715 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 ALAS2P22557 587 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 SPEM2Q0P670 501 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 LAMC2Q13753 1193 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 BHMTQ93088 406 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 SLC30A3Q99726 388 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 LRRC4BQ9NT99 713 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 HCN2Q9UL51 889 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 KCNH4Q9UQ05 1017 aa7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 GPC6Q9Y625 555 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-208ENST00000506971 IGFBP4P22692 258 aa7.98□□□□□ -1.13
CALCOCO2-208ENST00000506971 HIF1AQ16665 826 aa7.98□□□□□ -1.13
CALCOCO2-208ENST00000506971 FAM182BQ5T319 152 aa7.98□□□□□ -1.13
CALCOCO2-208ENST00000506971 ZNF468Q5VIY5 522 aaPredicted RBP7.98□□□□□ -1.13
CALCOCO2-208ENST00000506971 CHSY3Q70JA7 882 aa7.98□□□□□ -1.13
CALCOCO2-208ENST00000506971 C14orf37Q86TY3 774 aa7.98□□□□□ -1.13
CALCOCO2-208ENST00000506971 PNMA5Q96PV4 448 aa7.98□□□□□ -1.13
CALCOCO2-208ENST00000506971 KLK14Q9P0G3 267 aa7.98□□□□□ -1.13
CALCOCO2-208ENST00000506971 EFSO43281 561 aa7.97□□□□□ -1.13
CALCOCO2-208ENST00000506971 GSK3AP49840 483 aa7.97□□□□□ -1.13
CALCOCO2-208ENST00000506971 HIRAP54198 1017 aaPredicted RBP7.97□□□□□ -1.13
CALCOCO2-208ENST00000506971 DGKZQ13574 1117 aa7.97□□□□□ -1.13
CALCOCO2-208ENST00000506971 BTLAQ7Z6A9 289 aa7.97□□□□□ -1.13
CALCOCO2-208ENST00000506971 FCHSD1Q86WN1 690 aa7.97□□□□□ -1.13
CALCOCO2-208ENST00000506971 ARXQ96QS3 562 aa7.97□□□□□ -1.13
CALCOCO2-208ENST00000506971 KLF15Q9UIH9 416 aa7.97□□□□□ -1.13
CALCOCO2-208ENST00000506971 TYRO3Q06418 890 aa7.96□□□□□ -1.14
CALCOCO2-208ENST00000506971 RTN1Q16799 776 aa7.96□□□□□ -1.14
CALCOCO2-208ENST00000506971 STAG2Q8N3U4 1231 aa7.96□□□□□ -1.14
CALCOCO2-208ENST00000506971 C7orf43Q8WVR3 580 aa7.96□□□□□ -1.14
CALCOCO2-208ENST00000506971 STK32AQ8WU08 396 aa7.95□□□□□ -1.14
CALCOCO2-208ENST00000506971 MKNK1Q9BUB5 465 aa7.95□□□□□ -1.14
CALCOCO2-208ENST00000506971 UBE2OQ9C0C9 1292 aaKnown RBP7.95□□□□□ -1.14
CALCOCO2-208ENST00000506971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.95□□□□□ -1.14
CALCOCO2-208ENST00000506971 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
CALCOCO2-208ENST00000506971 PIK3R2O00459 728 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms