RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 PPFIA3O75145 1194 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 ITGA6P23229 1130 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 DBN1Q16643 649 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 LRRC69Q6ZNQ3 347 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 HELQQ8TDG4 1101 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 HSH2DQ96JZ2 352 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 CRISPLD1Q9H336 500 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 BCS1LQ9Y276 419 aa7.38□□□□□ -1.23
TOPBP1-204ENST00000505804 ZBTB7CA1YPR0 619 aa7.37□□□□□ -1.23
TOPBP1-204ENST00000505804 TNFRSF10BO14763 440 aa7.37□□□□□ -1.23
TOPBP1-204ENST00000505804 THBS1P07996 1170 aa7.37□□□□□ -1.23
TOPBP1-204ENST00000505804 FKBP4Q02790 459 aaKnown RBP eCLIP7.37□□□□□ -1.23
TOPBP1-204ENST00000505804 FAM26DQ5JW98 314 aa7.37□□□□□ -1.23
TOPBP1-204ENST00000505804 IFT43Q96FT9 208 aa7.37□□□□□ -1.23
TOPBP1-204ENST00000505804 STIM2Q9P246 746 aa7.37□□□□□ -1.23
TOPBP1-204ENST00000505804 GJA3Q9Y6H8 435 aa7.37□□□□□ -1.23
TOPBP1-204ENST00000505804 H7C1W4 665 aa7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 ICMTO60725 284 aa7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 BRD2P25440 801 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 VEGFBP49765 207 aa7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 EFHC2Q5JST6 749 aa7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 TRIM22Q8IYM9 498 aa7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 ANKIB1Q9P2G1 1089 aa7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 NXF1Q9UBU9 619 aaKnown RBP7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 GPC6Q9Y625 555 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-204ENST00000505804 ZBTB39O15060 712 aa7.35□□□□□ -1.23
TOPBP1-204ENST00000505804 SF3B2Q13435 895 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-204ENST00000505804 NLRP8Q86W28 1048 aa7.35□□□□□ -1.23
TOPBP1-204ENST00000505804 VWA5B2Q8N398 1253 aa7.35□□□□□ -1.23
TOPBP1-204ENST00000505804 ZCCHC2Q9C0B9 1178 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-204ENST00000505804 NUCKS1Q9H1E3 243 aaKnown RBP7.35□□□□□ -1.23
TOPBP1-204ENST00000505804 EGFL7Q9UHF1 273 aa7.35□□□□□ -1.23
TOPBP1-204ENST00000505804 CDC14CA4D256 554 aa7.34□□□□□ -1.23
TOPBP1-204ENST00000505804 SOWAHDA6NJG2 315 aa7.34□□□□□ -1.23
TOPBP1-204ENST00000505804 H3BRB1 525 aa7.34□□□□□ -1.23
TOPBP1-204ENST00000505804 HIF1AQ16665 826 aa7.34□□□□□ -1.23
TOPBP1-204ENST00000505804 ETFBKMTQ8IXQ9 262 aa7.34□□□□□ -1.23
TOPBP1-204ENST00000505804 TUT1Q9H6E5 874 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-204ENST00000505804 DMGDHQ9UI17 866 aaKnown RBP7.34□□□□□ -1.23
TOPBP1-204ENST00000505804 MICAL2O94851 1124 aa7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 MPSTP25325 297 aa7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 UBAP2LQ14157 1087 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 LBRQ14739 615 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 ECM1Q16610 540 aa7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 TREML1Q86YW5 311 aa7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 GLYCTKQ8IVS8 523 aa7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 GTPBP3Q969Y2 492 aaKnown RBP7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 ZNF837Q96EG3 531 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-204ENST00000505804 TGFBR3LH3BV60 316 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 FAM13AO94988 1023 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 NPR3P17342 541 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 NOM1Q5C9Z4 860 aaKnown RBP7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 SV2AQ7L0J3 742 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 BTLAQ7Z6A9 289 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 ATCAYQ86WG3 371 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 GMCL1Q96IK5 515 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 CEP63Q96MT8 703 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
TOPBP1-204ENST00000505804 OPLAHO14841 1288 aa7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 ATXN7O15265 892 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 BNIP3LO60238 219 aa7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 EIF1AXP47813 144 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 IDH3AP50213 366 aa7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 AAMPQ13685 434 aa7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 FIGNL1Q6PIW4 674 aa7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 ABTB2Q8N961 1025 aa7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 BIN2Q9UBW5 565 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-204ENST00000505804 GPR25O00155 361 aa7.3□□□□□ -1.24
TOPBP1-204ENST00000505804 TERTO14746 1132 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-204ENST00000505804 ZAP70P43403 619 aa7.3□□□□□ -1.24
TOPBP1-204ENST00000505804 SAMD5Q5TGI4 173 aa7.3□□□□□ -1.24
TOPBP1-204ENST00000505804 IER5Q5VY09 327 aa7.3□□□□□ -1.24
TOPBP1-204ENST00000505804 NANOS1Q8WY41 292 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-204ENST00000505804 USP20Q9Y2K6 914 aa7.3□□□□□ -1.24
TOPBP1-204ENST00000505804 DCDC2BA2VCK2 349 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 H3BM21 787 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 KHNYNO15037 678 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 INPP5BP32019 993 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 ARHGAP4P98171 946 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 TNP2Q05952 138 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 TYRO3Q06418 890 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 FOXR1Q6PIV2 292 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 NPAS3Q8IXF0 933 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 GPR161Q8N6U8 529 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 ABHD17AQ96GS6 310 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 NDFIP2Q9NV92 336 aa7.29□□□□□ -1.24
TOPBP1-204ENST00000505804 MAPTP10636 758 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 SFSWAPQ12872 951 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 ALKBH2Q6NS38 261 aa7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 SND1Q7KZF4 910 aaKnown RBP eCLIP7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 RGL4Q8IZJ4 473 aa7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 GPR152Q8TDT2 470 aa7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 BRD7Q9NPI1 651 aa7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 STRN4Q9NRL3 753 aa7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 CCDC87Q9NVE4 849 aa7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 HCN2Q9UL51 889 aa7.28□□□□□ -1.24
TOPBP1-204ENST00000505804 FAM157BP0CG42 384 aa7.27□□□□□ -1.25
TOPBP1-204ENST00000505804 ARSDP51689 593 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms