RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	WBP1L	Q9NX94	342 aa		13.97	□□□□□ -0.17
APBB3-209	ENST00000504872	ZBTB1	Q9Y2K1	713 aa		13.97	□□□□□ -0.17
APBB3-209	ENST00000504872	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.97	□□□□□ -0.17
APBB3-209	ENST00000504872	UBR3	Q6ZT12	1888 aa		13.97	□□□□□ -0.17
APBB3-209	ENST00000504872	IL6ST	P40189	918 aa	Predicted RBP	13.96	□□□□□ -0.17
APBB3-209	ENST00000504872	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.96	□□□□□ -0.17
APBB3-209	ENST00000504872	BCS1L	Q9Y276	419 aa		13.96	□□□□□ -0.17
APBB3-209	ENST00000504872	KDM2B	Q8NHM5	1336 aa		13.95	□□□□□ -0.18
APBB3-209	ENST00000504872	PDIA6	Q15084	440 aa		13.95	□□□□□ -0.18
APBB3-209	ENST00000504872	KRT24	Q2M2I5	525 aa		13.95	□□□□□ -0.18
APBB3-209	ENST00000504872	LRP10	Q7Z4F1	713 aa		13.95	□□□□□ -0.18
APBB3-209	ENST00000504872	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.94	□□□□□ -0.18
APBB3-209	ENST00000504872	HOXB7	P09629	217 aa		13.94	□□□□□ -0.18
APBB3-209	ENST00000504872	SALL2	Q9Y467	1007 aa	Predicted RBP	13.94	□□□□□ -0.18
APBB3-209	ENST00000504872	LAS1L	Q9Y4W2	734 aa	Known RBP	13.94	□□□□□ -0.18
APBB3-209	ENST00000504872	CNTNAP1	P78357	1384 aa		13.94	□□□□□ -0.18
APBB3-209	ENST00000504872	GYS1	P13807	737 aa		13.93	□□□□□ -0.18
APBB3-209	ENST00000504872	CANX	P27824	592 aa	Known RBP	13.93	□□□□□ -0.18
APBB3-209	ENST00000504872	TRMT2A	Q8IZ69	625 aa	Known RBP	13.93	□□□□□ -0.18
APBB3-209	ENST00000504872	C8orf58	Q8NAV2	365 aa		13.93	□□□□□ -0.18
APBB3-209	ENST00000504872	BCL2L12	Q9HB09	334 aa		13.93	□□□□□ -0.18
APBB3-209	ENST00000504872		A0A0G2JLW4	131 aa		13.92	□□□□□ -0.18
APBB3-209	ENST00000504872	PHF14	O94880	888 aa		13.92	□□□□□ -0.18
APBB3-209	ENST00000504872	TM4SF1	P30408	202 aa		13.92	□□□□□ -0.18
APBB3-209	ENST00000504872	VEGFB	P49765	207 aa		13.92	□□□□□ -0.18
APBB3-209	ENST00000504872	DUSP27	Q5VZP5	1158 aa		13.92	□□□□□ -0.18
APBB3-209	ENST00000504872	AIDA	Q96BJ3	306 aa		13.92	□□□□□ -0.18
APBB3-209	ENST00000504872	CREBZF	Q9NS37	354 aa		13.92	□□□□□ -0.18
APBB3-209	ENST00000504872	NARF	Q9UHQ1	456 aa		13.92	□□□□□ -0.18
APBB3-209	ENST00000504872	ERBB4	Q15303	1308 aa		13.91	□□□□□ -0.18
APBB3-209	ENST00000504872	RFC4	P35249	363 aa		13.91	□□□□□ -0.18
APBB3-209	ENST00000504872	NLGN1	Q8N2Q7	840 aa		13.91	□□□□□ -0.18
APBB3-209	ENST00000504872	TSPYL6	Q8N831	410 aa		13.91	□□□□□ -0.18
APBB3-209	ENST00000504872	USP42	Q9H9J4	1324 aa	Known RBP	13.9	□□□□□ -0.18
APBB3-209	ENST00000504872		A0A087WZG4	1122 aa		13.9	□□□□□ -0.18
APBB3-209	ENST00000504872	RGL2	O15211	777 aa		13.9	□□□□□ -0.18
APBB3-209	ENST00000504872	SLFN5	Q08AF3	891 aa		13.9	□□□□□ -0.18
APBB3-209	ENST00000504872	TSR2	Q969E8	191 aa	Known RBP	13.9	□□□□□ -0.18
APBB3-209	ENST00000504872	RNF181	Q9P0P0	153 aa		13.9	□□□□□ -0.18
APBB3-209	ENST00000504872	SRP68	Q9UHB9	627 aa	Known RBP	13.9	□□□□□ -0.18
APBB3-209	ENST00000504872	COL15A1	P39059	1388 aa		13.89	□□□□□ -0.19
APBB3-209	ENST00000504872	POTEC	B2RU33	542 aa		13.89	□□□□□ -0.19
APBB3-209	ENST00000504872	CAMTA2	O94983	1202 aa		13.89	□□□□□ -0.19
APBB3-209	ENST00000504872	PIP4K2A	P48426	406 aa	Predicted RBP	13.89	□□□□□ -0.19
APBB3-209	ENST00000504872	GOLGA2	Q08379	1002 aa		13.89	□□□□□ -0.19
APBB3-209	ENST00000504872	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
APBB3-209	ENST00000504872	VAMP4	O75379	141 aa		13.88	□□□□□ -0.19
APBB3-209	ENST00000504872	EIF2S2	P20042	333 aa	Known RBP	13.88	□□□□□ -0.19
APBB3-209	ENST00000504872	FKBP8	Q14318	412 aa		13.88	□□□□□ -0.19
APBB3-209	ENST00000504872	PRPF38B	Q5VTL8	546 aa	Known RBP	13.88	□□□□□ -0.19
APBB3-209	ENST00000504872	USPL1	Q5W0Q7	1092 aa		13.88	□□□□□ -0.19
APBB3-209	ENST00000504872	TBC1D2B	Q9UPU7	963 aa		13.88	□□□□□ -0.19
APBB3-209	ENST00000504872	FANCI	Q9NVI1	1328 aa		13.88	□□□□□ -0.19
APBB3-209	ENST00000504872	ELL2	O00472	640 aa	Predicted RBP	13.87	□□□□□ -0.19
APBB3-209	ENST00000504872	ZPR1	O75312	459 aa		13.87	□□□□□ -0.19
APBB3-209	ENST00000504872	PROSER3	Q2NL68	480 aa		13.87	□□□□□ -0.19
APBB3-209	ENST00000504872	CLEC4G	Q6UXB4	293 aa		13.87	□□□□□ -0.19
APBB3-209	ENST00000504872	KIF13B	Q9NQT8	1826 aa		13.87	□□□□□ -0.19
APBB3-209	ENST00000504872	ERVV-1	B6SEH8	477 aa		13.86	□□□□□ -0.19
APBB3-209	ENST00000504872	EXOSC9	Q06265	439 aa	Known RBP	13.86	□□□□□ -0.19
APBB3-209	ENST00000504872	TTLL7	Q6ZT98	887 aa		13.86	□□□□□ -0.19
APBB3-209	ENST00000504872	DZIP3	Q86Y13	1208 aa	Known RBP	13.86	□□□□□ -0.19
APBB3-209	ENST00000504872	CDCA7L	Q96GN5	454 aa		13.86	□□□□□ -0.19
APBB3-209	ENST00000504872	MYH16	Q9H6N6	1097 aa		13.86	□□□□□ -0.19
APBB3-209	ENST00000504872	DBF4	Q9UBU7	674 aa	Predicted RBP	13.86	□□□□□ -0.19
APBB3-209	ENST00000504872	BRCA1	P38398	1863 aa	Known RBP	13.86	□□□□□ -0.19
APBB3-209	ENST00000504872		E9PSI1	815 aa		13.85	□□□□□ -0.19
APBB3-209	ENST00000504872	VEGFA	P15692	232 aa	Predicted RBP	13.85	□□□□□ -0.19
APBB3-209	ENST00000504872	DPEP1	P16444	411 aa		13.85	□□□□□ -0.19
APBB3-209	ENST00000504872	KCNA3	P22001	575 aa		13.85	□□□□□ -0.19
APBB3-209	ENST00000504872	TWISTNB	Q3B726	338 aa	Predicted RBP	13.85	□□□□□ -0.19
APBB3-209	ENST00000504872	HDGFL1	Q5TGJ6	251 aa		13.85	□□□□□ -0.19
APBB3-209	ENST00000504872	CHMP4A	Q9BY43	222 aa		13.85	□□□□□ -0.19
APBB3-209	ENST00000504872	ANXA1	P04083	346 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	POTEI	P0CG38	1075 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	POTEJ	P0CG39	1038 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	MYL6B	P14649	208 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	NFIX	Q14938	502 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	HLF	Q16534	295 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	NECTIN2	Q92692	538 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	CHPF2	Q9P2E5	772 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	SBF1	O95248	1867 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	C4A	P0C0L4	1744 aa		13.84	□□□□□ -0.19
APBB3-209	ENST00000504872	LAMB4	A4D0S4	1761 aa		13.83	□□□□□ -0.19
APBB3-209	ENST00000504872	POLRMT	O00411	1230 aa	Known RBP	13.83	□□□□□ -0.2
APBB3-209	ENST00000504872	MMP10	P09238	476 aa		13.83	□□□□□ -0.2
APBB3-209	ENST00000504872	DDR1	Q08345	913 aa		13.83	□□□□□ -0.2
APBB3-209	ENST00000504872	CCDC30	Q5VVM6	783 aa		13.83	□□□□□ -0.2
APBB3-209	ENST00000504872	COPS6	Q7L5N1	327 aa		13.83	□□□□□ -0.2
APBB3-209	ENST00000504872	MCOLN1	Q9GZU1	580 aa		13.83	□□□□□ -0.2
APBB3-209	ENST00000504872	HYPK	Q9NX55	129 aa		13.83	□□□□□ -0.2
APBB3-209	ENST00000504872	MAP3K15	Q6ZN16	1313 aa		13.83	□□□□□ -0.2
APBB3-209	ENST00000504872	TBC1D9B	Q66K14	1250 aa		13.82	□□□□□ -0.2
APBB3-209	ENST00000504872	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.82	□□□□□ -0.2
APBB3-209	ENST00000504872	TGFB2	P61812	414 aa		13.81	□□□□□ -0.2
APBB3-209	ENST00000504872	ZNF34	Q8IZ26	560 aa		13.81	□□□□□ -0.2
APBB3-209	ENST00000504872	XAGE3	Q8WTP9	111 aa		13.81	□□□□□ -0.2
APBB3-209	ENST00000504872	PHAX	Q9H814	394 aa	Known RBP	13.81	□□□□□ -0.2
APBB3-209	ENST00000504872	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.81	□□□□□ -0.2
APBB3-209	ENST00000504872	GLTPD2	A6NH11	291 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms