RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PHC3Q8NDX5 983 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 KRT38O76015 456 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 U2AF2P26368 475 aaKnown RBP eCLIP7.22□□□□□ -1.257e-9■■■■□ 20.9
CLCN3-204ENST00000504131 ERC1Q8IUD2 1116 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 KIF2AO00139 706 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-204ENST00000504131 ZNF394Q53GI3 561 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 CCDC110Q8TBZ0 833 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 TRMT1Q9NXH9 659 aaKnown RBP7.22□□□□□ -1.25
CLCN3-204ENST00000504131 SPAG9O60271 1321 aaKnown RBP7.22□□□□□ -1.25
CLCN3-204ENST00000504131 PSMC4P43686 418 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 IRF5Q13568 498 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 FAM76AQ8TAV0 307 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 SLC26A4O43511 780 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 ZSCAN20P17040 1043 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-204ENST00000504131 NANOGNBQ7Z5D8 188 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 SNX32Q86XE0 403 aa7.22□□□□□ -1.25
CLCN3-204ENST00000504131 FANCD2Q9BXW9 1451 aa7.21□□□□□ -1.25
CLCN3-204ENST00000504131 HOXA2O43364 376 aa7.21□□□□□ -1.25
CLCN3-204ENST00000504131 CHMP2AO43633 222 aa7.21□□□□□ -1.25
CLCN3-204ENST00000504131 XRCC6P12956 609 aaKnown RBP eCLIP7.21□□□□□ -1.252e-6■■■■■ 34.5
CLCN3-204ENST00000504131 NACA2Q9H009 215 aa7.21□□□□□ -1.25
CLCN3-204ENST00000504131 DISC1Q9NRI5 854 aa7.21□□□□□ -1.25
CLCN3-204ENST00000504131 WHAMMP3Q1A5X7 153 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 SLC4A10Q6U841 1118 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 N4BP2L2Q92802 583 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-204ENST00000504131 SH3GL1Q99961 368 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 U3KPZ7 1027 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-204ENST00000504131 PRPF40AO75400 957 aaKnown RBP7.21□□□□□ -1.26
CLCN3-204ENST00000504131 GNAT2P19087 354 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 NEDD9Q14511 834 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 AKNAD1Q5T1N1 836 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 ISM2Q6H9L7 571 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 ZNF662Q6ZS27 426 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 CCDC121Q6ZUS5 278 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.21□□□□□ -1.26
CLCN3-204ENST00000504131 IQCF2Q8IXL9 164 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 CAVIN2O95810 425 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 RRM1P23921 792 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 PPFIBP1Q86W92 1011 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 CCDC89Q8N998 374 aa7.21□□□□□ -1.26
CLCN3-204ENST00000504131 RANBP17Q9H2T7 1088 aaKnown RBP7.21□□□□□ -1.26
CLCN3-204ENST00000504131 RNF8O76064 485 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 BASP1P80723 227 aaKnown RBP7.2□□□□□ -1.26
CLCN3-204ENST00000504131 MKRN3Q13064 507 aaKnown RBP7.2□□□□□ -1.26
CLCN3-204ENST00000504131 FAAH2Q6GMR7 532 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 CYB5RLQ6IPT4 315 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 CCAR2Q8N163 923 aaKnown RBP7.2□□□□□ -1.26
CLCN3-204ENST00000504131 PRELID1Q9Y255 219 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 ERC2O15083 957 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 SNX16P57768 344 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 STK3Q13188 491 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 GSDMBQ8TAX9 411 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 RPGRQ92834 1020 aaKnown RBP7.2□□□□□ -1.26
CLCN3-204ENST00000504131 MRRFQ96E11 262 aaKnown RBP7.2□□□□□ -1.26
CLCN3-204ENST00000504131 LARP6Q9BRS8 491 aaKnown RBP7.2□□□□□ -1.26
CLCN3-204ENST00000504131 HELLSQ9NRZ9 838 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 LAMC3Q9Y6N6 1575 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 PPP4R3CPQ6ZMV5 832 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 SEPT8Q92599 483 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 GPR101Q96P66 508 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-204ENST00000504131 MTRQ99707 1265 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 TMCC3Q9ULS5 477 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 GOLGA6L7A0A1B0GV03 622 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 MCM5P33992 734 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 TMF1P82094 1093 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 SH2D4BQ5SQS7 431 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 TMCO3Q6UWJ1 677 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 PMM1Q92871 262 aa7.2□□□□□ -1.26
CLCN3-204ENST00000504131 ARHGEF1Q92888 912 aaKnown RBP7.2□□□□□ -1.26
CLCN3-204ENST00000504131 ATP2B1P20020 1258 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 PPP1R14BQ96C90 147 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 SAAL1Q96ER3 474 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 CFTRP13569 1480 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 ROCK1Q13464 1354 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 TESPA1A2RU30 521 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-204ENST00000504131 SEPT2Q15019 361 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 SUGT1Q9Y2Z0 365 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 RUFY3Q7L099 469 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 EVI5LQ96CN4 794 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 FOSP01100 380 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-204ENST00000504131 MAP7Q14244 749 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 LLGL2Q6P1M3 1020 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 CCDC186Q7Z3E2 898 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.19□□□□□ -1.26
CLCN3-204ENST00000504131 TNPO1Q92973 898 aaKnown RBP7.19□□□□□ -1.26
CLCN3-204ENST00000504131 ARPC5LQ9BPX5 153 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 TMED1Q13445 227 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 TBC1D22AQ8WUA7 517 aa7.19□□□□□ -1.26
CLCN3-204ENST00000504131 NSRP1Q9H0G5 558 aaKnown RBP7.19□□□□□ -1.26
CLCN3-204ENST00000504131 TOP2BQ02880 1626 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 CCDC88BA6NC98 1476 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 HIP1RO75146 1068 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 VASPP50552 380 aaPredicted RBP7.18□□□□□ -1.26
CLCN3-204ENST00000504131 WTAPQ15007 396 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 RCN1Q15293 331 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 PPFIBP2Q8ND30 876 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 MGARPQ8TDB4 240 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 RBM47A0AV96 593 aaKnown RBP7.18□□□□□ -1.26
CLCN3-204ENST00000504131 NEMFO60524 1076 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 GIGYF1O75420 1035 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms