RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-212ENST00000502563 C10orf71Q711Q0 1435 aa13.87□□□□□ -0.19
UBE2D3-212ENST00000502563 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
UBE2D3-212ENST00000502563 IBTKQ9P2D0 1353 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-212ENST00000502563 MMP10P09238 476 aa13.86□□□□□ -0.19
UBE2D3-212ENST00000502563 FKBP8Q14318 412 aa13.86□□□□□ -0.19
UBE2D3-212ENST00000502563 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
UBE2D3-212ENST00000502563 CCDC30Q5VVM6 783 aa13.86□□□□□ -0.19
UBE2D3-212ENST00000502563 TRMT2AQ8IZ69 625 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-212ENST00000502563 SRP68Q9UHB9 627 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-212ENST00000502563 MAP3K15Q6ZN16 1313 aa13.86□□□□□ -0.19
UBE2D3-212ENST00000502563 CARMIL3Q8ND23 1372 aa13.85□□□□□ -0.19
UBE2D3-212ENST00000502563 POLRMTO00411 1230 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-212ENST00000502563 CT47B1P0C2W7 299 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-212ENST00000502563 TWISTNBQ3B726 338 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-212ENST00000502563 C8orf58Q8NAV2 365 aa13.85□□□□□ -0.19
UBE2D3-212ENST00000502563 TSR2Q969E8 191 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-212ENST00000502563 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
UBE2D3-212ENST00000502563 PARP3Q9Y6F1 533 aa13.85□□□□□ -0.19
UBE2D3-212ENST00000502563 EIF2S2P20042 333 aaKnown RBP13.84□□□□□ -0.19
UBE2D3-212ENST00000502563 SLFN5Q08AF3 891 aa13.84□□□□□ -0.19
UBE2D3-212ENST00000502563 NFIXQ14938 502 aa13.84□□□□□ -0.19
UBE2D3-212ENST00000502563 MSL1Q68DK7 614 aa13.84□□□□□ -0.19
UBE2D3-212ENST00000502563 KIF6Q6ZMV9 814 aa13.84□□□□□ -0.19
UBE2D3-212ENST00000502563 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
UBE2D3-212ENST00000502563 TGFB2P61812 414 aa13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 DDR1Q08345 913 aa13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 HSP90AB3PQ58FF7 597 aa13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 GIGYF2Q6Y7W6 1299 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 TSPYL6Q8N831 410 aa13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 CHPF2Q9P2E5 772 aa13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 PDZRN3Q9UPQ7 1066 aa13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
UBE2D3-212ENST00000502563 RIC1Q4ADV7 1423 aa13.82□□□□□ -0.2
UBE2D3-212ENST00000502563 VAMP4O75379 141 aa13.82□□□□□ -0.2
UBE2D3-212ENST00000502563 PROSER3Q2NL68 480 aa13.82□□□□□ -0.2
UBE2D3-212ENST00000502563 NUP98P52948 1817 aa13.82□□□□□ -0.2
UBE2D3-212ENST00000502563 MYL6BP14649 208 aa13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 TBC1D9BQ66K14 1250 aa13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 COPS6Q7L5N1 327 aa13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 PLBD2Q8NHP8 589 aa13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 SETDB2Q96T68 719 aa13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 ZNF330Q9Y3S2 320 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 ZBED9Q6R2W3 1325 aa13.81□□□□□ -0.2
UBE2D3-212ENST00000502563 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-212ENST00000502563 SERPINB2P05120 415 aa13.8□□□□□ -0.2
UBE2D3-212ENST00000502563 EXOSC9Q06265 439 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-212ENST00000502563 TRIM28Q13263 835 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-212ENST00000502563 PARP10Q53GL7 1025 aa13.8□□□□□ -0.2
UBE2D3-212ENST00000502563 TTLL7Q6ZT98 887 aa13.8□□□□□ -0.2
UBE2D3-212ENST00000502563 ZNF34Q8IZ26 560 aa13.8□□□□□ -0.2
UBE2D3-212ENST00000502563 STK31Q9BXU1 1019 aa13.8□□□□□ -0.2
UBE2D3-212ENST00000502563 KIAA1551Q9HCM1 1747 aa13.79□□□□□ -0.2
UBE2D3-212ENST00000502563 ANKRD36CQ5JPF3 1778 aa13.79□□□□□ -0.2
UBE2D3-212ENST00000502563 ANKRD13DQ6ZTN6 518 aa13.79□□□□□ -0.2
UBE2D3-212ENST00000502563 XAGE3Q8WTP9 111 aa13.79□□□□□ -0.2
UBE2D3-212ENST00000502563 KLRG2A4D1S0 409 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-212ENST00000502563 ELL2O00472 640 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-212ENST00000502563 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-212ENST00000502563 HLFQ16534 295 aa13.78□□□□□ -0.2
UBE2D3-212ENST00000502563 TPTE2Q6XPS3 522 aa13.78□□□□□ -0.2
UBE2D3-212ENST00000502563 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
UBE2D3-212ENST00000502563 NYXQ9GZU5 481 aa13.78□□□□□ -0.2
UBE2D3-212ENST00000502563 PXDNLA1KZ92 1463 aa13.78□□□□□ -0.2
UBE2D3-212ENST00000502563 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-212ENST00000502563 TCIRG1Q13488 830 aa13.77□□□□□ -0.21
UBE2D3-212ENST00000502563 NIP7Q9Y221 180 aaKnown RBP eCLIP13.77□□□□□ -0.21
UBE2D3-212ENST00000502563 ANXA1P04083 346 aa13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 PRR5LQ6MZQ0 368 aa13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 PPP1R42Q7Z4L9 355 aa13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 CNBD1Q8NA66 436 aa13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 ZBTB3Q9H5J0 574 aa13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 BRCA1P38398 1863 aaKnown RBP13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 ARFGEF2Q9Y6D5 1785 aa13.76□□□□□ -0.21
UBE2D3-212ENST00000502563 UBN2Q6ZU65 1347 aa13.75□□□□□ -0.21
UBE2D3-212ENST00000502563 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
UBE2D3-212ENST00000502563 PDE6BP35913 854 aa13.75□□□□□ -0.21
UBE2D3-212ENST00000502563 ST5P78524 1137 aa13.75□□□□□ -0.21
UBE2D3-212ENST00000502563 KSR2Q6VAB6 950 aa13.75□□□□□ -0.21
UBE2D3-212ENST00000502563 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-212ENST00000502563 NECTIN2Q92692 538 aa13.75□□□□□ -0.21
UBE2D3-212ENST00000502563 ISCA1Q9BUE6 129 aa13.75□□□□□ -0.21
UBE2D3-212ENST00000502563 FLIIQ13045 1269 aa13.74□□□□□ -0.21
UBE2D3-212ENST00000502563 NLGN2Q8NFZ4 835 aa13.74□□□□□ -0.21
UBE2D3-212ENST00000502563 CDCA7LQ96GN5 454 aa13.74□□□□□ -0.21
UBE2D3-212ENST00000502563 PHAXQ9H814 394 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-212ENST00000502563 NTSR2O95665 410 aa13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 KCNA3P22001 575 aa13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 AIMP1Q12904 312 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 CRY2Q49AN0 593 aa13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 SLC10A5Q5PT55 438 aa13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 BICDL1Q6ZP65 573 aa13.73□□□□□ -0.21
UBE2D3-212ENST00000502563 NLRP10Q86W26 655 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms