RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 UBR3Q6ZT12 1888 aa6.03□□□□□ -1.44
MATR3-202ENST00000502422 TNRC6CQ9HCJ0 1690 aaKnown RBP6.03□□□□□ -1.44
MATR3-202ENST00000502422 SEMA3EO15041 775 aa6.02□□□□□ -1.44
MATR3-202ENST00000502422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.02□□□□□ -1.44
MATR3-202ENST00000502422 TMOD3Q9NYL9 352 aa6.02□□□□□ -1.44
MATR3-202ENST00000502422 COLQQ9Y215 455 aaPredicted RBP6.02□□□□□ -1.44
MATR3-202ENST00000502422 RTCBQ9Y3I0 505 aaKnown RBP6.02□□□□□ -1.44
MATR3-202ENST00000502422 PARP3Q9Y6F1 533 aa6.02□□□□□ -1.44
MATR3-202ENST00000502422 HSPA1AP0DMV8 641 aaKnown RBP6.02□□□□□ -1.45
MATR3-202ENST00000502422 HSPA1BP0DMV9 641 aaKnown RBP6.02□□□□□ -1.45
MATR3-202ENST00000502422 DPEP1P16444 411 aa6.02□□□□□ -1.45
MATR3-202ENST00000502422 LINC00116Q8NCU8 138 aa6.02□□□□□ -1.45
MATR3-202ENST00000502422 PIGBQ92521 554 aa6.02□□□□□ -1.45
MATR3-202ENST00000502422 RNF181Q9P0P0 153 aa6.02□□□□□ -1.45
MATR3-202ENST00000502422 PIM2Q9P1W9 311 aa6.02□□□□□ -1.45
MATR3-202ENST00000502422 ITGB4P16144 1822 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 POTEFA5A3E0 1075 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 CYP27B1O15528 508 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 RFC4P35249 363 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 DSG2Q14126 1118 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 PPP1R15BQ5SWA1 713 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 SPG7Q9UQ90 795 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 NOP58Q9Y2X3 529 aaKnown RBP6.01□□□□□ -1.45
MATR3-202ENST00000502422 BOLA1Q9Y3E2 137 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 RTL1A6NKG5 1358 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 HSP90AB2PQ58FF8 381 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 DALRD3Q5D0E6 543 aaKnown RBP6.01□□□□□ -1.45
MATR3-202ENST00000502422 PKNOX2Q96KN3 472 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 SIN3AQ96ST3 1273 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 KCPQ6ZWJ8 1503 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 TOGARAM1Q9Y4F4 1720 aa6.01□□□□□ -1.45
MATR3-202ENST00000502422 CTCFP49711 727 aaPredicted RBP6□□□□□ -1.45
MATR3-202ENST00000502422 PUS7Q96PZ0 661 aaKnown RBP6□□□□□ -1.45
MATR3-202ENST00000502422 ASAP1Q9ULH1 1129 aa6□□□□□ -1.45
MATR3-202ENST00000502422 ARIH1Q9Y4X5 557 aaPredicted RBP6□□□□□ -1.45
MATR3-202ENST00000502422 TESPA1A2RU30 521 aaPredicted RBP6□□□□□ -1.45
MATR3-202ENST00000502422 VEGFAP15692 232 aaPredicted RBP6□□□□□ -1.45
MATR3-202ENST00000502422 PLCG2P16885 1265 aa6□□□□□ -1.45
MATR3-202ENST00000502422 ITPK1Q13572 414 aa6□□□□□ -1.45
MATR3-202ENST00000502422 GGNBP2Q9H3C7 697 aa6□□□□□ -1.45
MATR3-202ENST00000502422 KIF13BQ9NQT8 1826 aa5.99□□□□□ -1.45
MATR3-202ENST00000502422 PPM1GO15355 546 aaPredicted RBP5.99□□□□□ -1.45
MATR3-202ENST00000502422 EMILIN3Q9NT22 766 aa5.99□□□□□ -1.45
MATR3-202ENST00000502422 INSRP06213 1382 aa5.99□□□□□ -1.45
MATR3-202ENST00000502422 GYS1P13807 737 aa5.99□□□□□ -1.45
MATR3-202ENST00000502422 TMEM92Q6UXU6 159 aa5.99□□□□□ -1.45
MATR3-202ENST00000502422 IFNL2Q8IZJ0 200 aa5.99□□□□□ -1.45
MATR3-202ENST00000502422 DCAF5Q96JK2 942 aa5.99□□□□□ -1.45
MATR3-202ENST00000502422 ARFGEF1Q9Y6D6 1849 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 FLT4P35916 1363 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 WASHC2AQ641Q2 1341 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 C2orf72A6NCS6 295 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 FYB1O15117 783 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 KCNA3P22001 575 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 FOXK1P85037 733 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 ATG3Q9NT62 314 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 PKD1L3Q7Z443 1732 aa5.98□□□□□ -1.45
MATR3-202ENST00000502422 BRCA1P38398 1863 aaKnown RBP5.98□□□□□ -1.45
MATR3-202ENST00000502422 MAP2P11137 1827 aaKnown RBP5.97□□□□□ -1.45
MATR3-202ENST00000502422 GLTPD2A6NH11 291 aa5.97□□□□□ -1.45
MATR3-202ENST00000502422 TMC2Q8TDI7 906 aa5.97□□□□□ -1.45
MATR3-202ENST00000502422 AIDAQ96BJ3 306 aa5.97□□□□□ -1.45
MATR3-202ENST00000502422 C4AP0C0L4 1744 aa5.97□□□□□ -1.45
MATR3-202ENST00000502422 KIAA1551Q9HCM1 1747 aa5.97□□□□□ -1.45
MATR3-202ENST00000502422 RPS6KA4O75676 772 aa5.97□□□□□ -1.45
MATR3-202ENST00000502422 SEC24BO95487 1268 aa5.97□□□□□ -1.45
MATR3-202ENST00000502422 RC3H1Q5TC82 1133 aaKnown RBP5.97□□□□□ -1.45
MATR3-202ENST00000502422 KIF24Q5T7B8 1368 aa5.97□□□□□ -1.45
MATR3-202ENST00000502422 SBF1O95248 1867 aa5.96□□□□□ -1.45
MATR3-202ENST00000502422 PHKG2P15735 406 aa5.96□□□□□ -1.45
MATR3-202ENST00000502422 LMNB1P20700 586 aa5.96□□□□□ -1.45
MATR3-202ENST00000502422 CHRNA5P30532 468 aa5.96□□□□□ -1.45
MATR3-202ENST00000502422 SLAIN1Q8ND83 568 aa5.96□□□□□ -1.45
MATR3-202ENST00000502422 MKRN1Q9UHC7 482 aaKnown RBP5.96□□□□□ -1.45
MATR3-202ENST00000502422 ST20-MTHFSA0A0A6YYL1 179 aa5.96□□□□□ -1.46
MATR3-202ENST00000502422 CCER2I3L3R5 266 aa5.96□□□□□ -1.46
MATR3-202ENST00000502422 PRPF38BQ5VTL8 546 aaKnown RBP5.96□□□□□ -1.46
MATR3-202ENST00000502422 PLPP6Q8IY26 295 aa5.96□□□□□ -1.46
MATR3-202ENST00000502422 L3MBTL3Q96JM7 780 aaPredicted RBP5.96□□□□□ -1.46
MATR3-202ENST00000502422 CNTNAP4Q9C0A0 1308 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 DPYSL4O14531 572 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 ZPR1O75312 459 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 RASSF7Q02833 373 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 EMILIN1Q9Y6C2 1016 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 ERVV-2B6SEH9 535 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 G3V3G9 751 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 PTCD1O75127 700 aaKnown RBP5.95□□□□□ -1.46
MATR3-202ENST00000502422 HSP90AB1P08238 724 aaKnown RBP5.95□□□□□ -1.46
MATR3-202ENST00000502422 MLLT3P42568 568 aaPredicted RBP5.95□□□□□ -1.46
MATR3-202ENST00000502422 CABP4P57796 275 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 IRX6P78412 446 aaPredicted RBP5.95□□□□□ -1.46
MATR3-202ENST00000502422 EYA1Q99502 592 aa5.95□□□□□ -1.46
MATR3-202ENST00000502422 SLC4A9Q96Q91 983 aa5.94□□□□□ -1.46
MATR3-202ENST00000502422 SRP68Q9UHB9 627 aaKnown RBP5.94□□□□□ -1.46
MATR3-202ENST00000502422 CCDC88AQ3V6T2 1871 aa5.94□□□□□ -1.46
MATR3-202ENST00000502422 FOXN1O15353 648 aa5.94□□□□□ -1.46
MATR3-202ENST00000502422 CRKLP46109 303 aaKnown RBP5.94□□□□□ -1.46
MATR3-202ENST00000502422 DDR1Q08345 913 aa5.94□□□□□ -1.46
MATR3-202ENST00000502422 DDX10Q13206 875 aaKnown RBP5.94□□□□□ -1.46
MATR3-202ENST00000502422 FAM161AQ3B820 660 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms