RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 CUL4AQ13619 759 aa19.83■□□□□ 0.77
COL6A1-206ENST00000498614 NOL8Q76FK4 1167 aaKnown RBP19.83■□□□□ 0.77
COL6A1-206ENST00000498614 ANO2Q9NQ90 1003 aa19.83■□□□□ 0.77
COL6A1-206ENST00000498614 CCDC39Q9UFE4 941 aa19.83■□□□□ 0.76
COL6A1-206ENST00000498614 LMO7Q8WWI1 1683 aa19.82■□□□□ 0.76
COL6A1-206ENST00000498614 PLEKHO1Q53GL0 409 aaPredicted RBP19.82■□□□□ 0.76
COL6A1-206ENST00000498614 DNAAF4Q8WXU2 420 aa19.82■□□□□ 0.76
COL6A1-206ENST00000498614 UQCRHLA0A096LP55 91 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 SRGAP3O43295 1099 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 UQCRHP07919 91 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 MCM5P33992 734 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 ANKRD24Q8TF21 1146 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 PRDM11Q9NQV5 511 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 FAM13BQ9NYF5 915 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 PHRF1Q9P1Y6 1649 aaKnown RBP19.81■□□□□ 0.76
COL6A1-206ENST00000498614 HOXB7P09629 217 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 MCM2P49736 904 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 BEND3Q5T5X7 828 aa19.81■□□□□ 0.76
COL6A1-206ENST00000498614 MAP4K4O95819 1239 aaPredicted RBP19.8■□□□□ 0.76
COL6A1-206ENST00000498614 POLA2Q14181 598 aa19.8■□□□□ 0.76
COL6A1-206ENST00000498614 RGPD5Q99666 1765 aa19.8■□□□□ 0.76
COL6A1-206ENST00000498614 NUTM2BA6NNL0 878 aaPredicted RBP19.79■□□□□ 0.76
COL6A1-206ENST00000498614 NUTM2EB1AL46 878 aaPredicted RBP19.79■□□□□ 0.76
COL6A1-206ENST00000498614 C1orf141Q5JVX7 400 aa19.79■□□□□ 0.76
COL6A1-206ENST00000498614 NUTM2AQ8IVF1 878 aaPredicted RBP19.79■□□□□ 0.76
COL6A1-206ENST00000498614 RHPN1Q8TCX5 695 aa19.79■□□□□ 0.76
COL6A1-206ENST00000498614 RNMTO43148 476 aaKnown RBP19.79■□□□□ 0.76
COL6A1-206ENST00000498614 RAB11FIP3O75154 756 aa19.79■□□□□ 0.76
COL6A1-206ENST00000498614 MCCP23508 829 aa19.79■□□□□ 0.76
COL6A1-206ENST00000498614 CSPP1Q1MSJ5 1256 aa19.79■□□□□ 0.76
COL6A1-206ENST00000498614 FOXD4L6Q3SYB3 417 aaPredicted RBP19.79■□□□□ 0.76
COL6A1-206ENST00000498614 FOXD4L3Q6VB84 417 aaPredicted RBP19.79■□□□□ 0.76
COL6A1-206ENST00000498614 IL25Q9H293 177 aa19.79■□□□□ 0.76
COL6A1-206ENST00000498614 TSPY26PQ9H489 355 aa19.79■□□□□ 0.76
COL6A1-206ENST00000498614 PHLPP1O60346 1717 aa19.78■□□□□ 0.76
COL6A1-206ENST00000498614 ADCY9O60503 1353 aa19.78■□□□□ 0.76
COL6A1-206ENST00000498614 AHDC1Q5TGY3 1603 aaPredicted RBP19.78■□□□□ 0.76
COL6A1-206ENST00000498614 AOX1Q06278 1338 aa19.78■□□□□ 0.76
COL6A1-206ENST00000498614 ADAMTS2O95450 1211 aa19.78■□□□□ 0.76
COL6A1-206ENST00000498614 AMOTQ4VCS5 1084 aa19.78■□□□□ 0.76
COL6A1-206ENST00000498614 CRYBG1Q9Y4K1 1723 aa19.78■□□□□ 0.76
COL6A1-206ENST00000498614 GADD45BO75293 160 aaPredicted RBP19.77■□□□□ 0.76
COL6A1-206ENST00000498614 INTS4Q96HW7 963 aaKnown RBP19.77■□□□□ 0.76
COL6A1-206ENST00000498614 GDPD2Q9HCC8 539 aa19.77■□□□□ 0.76
COL6A1-206ENST00000498614 PRAMEF22A3QJZ6 481 aa19.76■□□□□ 0.75
COL6A1-206ENST00000498614 CSB-PGBD3P0DP91 1061 aa19.76■□□□□ 0.75
COL6A1-206ENST00000498614 UPF3BQ9BZI7 483 aaKnown RBP19.76■□□□□ 0.75
COL6A1-206ENST00000498614 ERBB3P21860 1342 aa19.76■□□□□ 0.75
COL6A1-206ENST00000498614 ANAPC15P60006 121 aa19.76■□□□□ 0.75
COL6A1-206ENST00000498614 PROSER3Q2NL68 480 aa19.76■□□□□ 0.75
COL6A1-206ENST00000498614 PI4K2BQ8TCG2 481 aa19.76■□□□□ 0.75
COL6A1-206ENST00000498614 KIF1BPQ96EK5 621 aa19.76■□□□□ 0.75
COL6A1-206ENST00000498614 DBF4Q9UBU7 674 aaPredicted RBP19.76■□□□□ 0.75
COL6A1-206ENST00000498614 CHMP4AQ9BY43 222 aa19.75■□□□□ 0.75
COL6A1-206ENST00000498614 NLRP2Q9NX02 1062 aa19.75■□□□□ 0.75
COL6A1-206ENST00000498614 STRN4Q9NRL3 753 aa19.75■□□□□ 0.75
COL6A1-206ENST00000498614 COL16A1Q07092 1604 aaPredicted RBP19.74■□□□□ 0.75
COL6A1-206ENST00000498614 PTMAP06454 111 aaKnown RBP19.74■□□□□ 0.75
COL6A1-206ENST00000498614 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
COL6A1-206ENST00000498614 GIGYF1O75420 1035 aaPredicted RBP19.73■□□□□ 0.75
COL6A1-206ENST00000498614 SASS6Q6UVJ0 657 aa19.73■□□□□ 0.75
COL6A1-206ENST00000498614 SYAP1Q96A49 352 aaPredicted RBP19.73■□□□□ 0.75
COL6A1-206ENST00000498614 MAP7D2Q96T17 732 aa19.73■□□□□ 0.75
COL6A1-206ENST00000498614 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.73■□□□□ 0.75
COL6A1-206ENST00000498614 USP48Q86UV5 1035 aa19.73■□□□□ 0.75
COL6A1-206ENST00000498614 CPDO75976 1380 aa19.73■□□□□ 0.75
COL6A1-206ENST00000498614 NCAPD2Q15021 1401 aa19.73■□□□□ 0.75
COL6A1-206ENST00000498614 OS9Q13438 667 aaPredicted RBP19.72■□□□□ 0.75
COL6A1-206ENST00000498614 DYNC1I1O14576 645 aa19.72■□□□□ 0.75
COL6A1-206ENST00000498614 HSPA1LP34931 641 aa19.72■□□□□ 0.75
COL6A1-206ENST00000498614 IL17RAQ96F46 866 aa19.71■□□□□ 0.75
COL6A1-206ENST00000498614 C9orf78Q9NZ63 289 aaPredicted RBP19.71■□□□□ 0.75
COL6A1-206ENST00000498614 COL18A1P39060 1754 aa19.71■□□□□ 0.75
COL6A1-206ENST00000498614 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
COL6A1-206ENST00000498614 MPNDQ8N594 471 aa19.71■□□□□ 0.75
COL6A1-206ENST00000498614 BTG4Q9NY30 223 aa19.71■□□□□ 0.75
COL6A1-206ENST00000498614 ABCA3Q99758 1704 aa19.7■□□□□ 0.74
COL6A1-206ENST00000498614 CAMTA1Q9Y6Y1 1673 aa19.7■□□□□ 0.74
COL6A1-206ENST00000498614 WDR33Q9C0J8 1336 aaKnown RBP19.7■□□□□ 0.74
COL6A1-206ENST00000498614 KIAA2012Q0VF49 1180 aa19.7■□□□□ 0.74
COL6A1-206ENST00000498614 PHF14O94880 888 aa19.69■□□□□ 0.74
COL6A1-206ENST00000498614 HSP90AB4PQ58FF6 505 aa19.69■□□□□ 0.74
COL6A1-206ENST00000498614 KSR2Q6VAB6 950 aa19.69■□□□□ 0.74
COL6A1-206ENST00000498614 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
COL6A1-206ENST00000498614 HSPA4P34932 840 aa19.69■□□□□ 0.74
COL6A1-206ENST00000498614 EVA1CP58658 441 aa19.69■□□□□ 0.74
COL6A1-206ENST00000498614 PA2G4Q9UQ80 394 aaKnown RBP19.69■□□□□ 0.74
COL6A1-206ENST00000498614 OVOS2A0A0G2JMS6 1433 aa19.68■□□□□ 0.74
COL6A1-206ENST00000498614 HEG1Q9ULI3 1381 aa19.68■□□□□ 0.74
COL6A1-206ENST00000498614 SGSM2O43147 1006 aa19.68■□□□□ 0.74
COL6A1-206ENST00000498614 LARP1Q6PKG0 1096 aaKnown RBP19.68■□□□□ 0.74
COL6A1-206ENST00000498614 RPAP1Q9BWH6 1393 aaPredicted RBP19.68■□□□□ 0.74
COL6A1-206ENST00000498614 AIMP1Q12904 312 aaKnown RBP19.68■□□□□ 0.74
COL6A1-206ENST00000498614 TOM1L2Q6ZVM7 507 aa19.68■□□□□ 0.74
COL6A1-206ENST00000498614 SIPA1L3O60292 1781 aaPredicted RBP19.67■□□□□ 0.74
COL6A1-206ENST00000498614 ALDH1L1O75891 902 aa19.67■□□□□ 0.74
COL6A1-206ENST00000498614 ZNF830Q96NB3 372 aaPredicted RBP19.67■□□□□ 0.74
COL6A1-206ENST00000498614 MTX1Q13505 466 aa19.66■□□□□ 0.74
COL6A1-206ENST00000498614 CWC27Q6UX04 472 aaKnown RBP19.66■□□□□ 0.74
COL6A1-206ENST00000498614 ARID3AQ99856 593 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms