RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 LOC105371045A0A1W2PR82 267 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 ADH1AP07327 375 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 TCF3P15923 654 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 NNTQ13423 1086 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 MTFR1Q15390 333 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 TSNAXIP1Q2TAA8 658 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 FAM26DQ5JW98 314 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 KRTAP4-2Q9BYR5 136 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.88□□□□□ -1.47
CALD1-224ENST00000498254 CABP1Q9NZU7 370 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 STIM2Q9P246 746 aa5.88□□□□□ -1.47
CALD1-224ENST00000498254 ZBTB39O15060 712 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 FZD6O60353 706 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 RECKO95980 971 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 NPR3P17342 541 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 RELBQ01201 579 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 MPNDQ8N594 471 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 ITPKCQ96DU7 683 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 XAGE2Q96GT9 111 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 FAM161BQ96MY7 647 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 ESYT1Q9BSJ8 1104 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 RBCK1Q9BYM8 510 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 ZNF395Q9H8N7 513 aaPredicted RBP5.87□□□□□ -1.47
CALD1-224ENST00000498254 ZFAND3Q9H8U3 227 aa5.87□□□□□ -1.47
CALD1-224ENST00000498254 SERTM1A2A2V5 107 aa5.86□□□□□ -1.47
CALD1-224ENST00000498254 VSIG8P0DPA2 414 aa5.86□□□□□ -1.47
CALD1-224ENST00000498254 DGKZQ13574 1117 aa5.86□□□□□ -1.47
CALD1-224ENST00000498254 SCARF1Q14162 830 aa5.86□□□□□ -1.47
CALD1-224ENST00000498254 MRPL14Q6P1L8 145 aaKnown RBP5.86□□□□□ -1.47
CALD1-224ENST00000498254 KDF1Q8NAX2 398 aaPredicted RBP5.86□□□□□ -1.47
CALD1-224ENST00000498254 ZDHHC1Q8WTX9 485 aa5.86□□□□□ -1.47
CALD1-224ENST00000498254 RNF19AQ9NV58 838 aa5.86□□□□□ -1.47
CALD1-224ENST00000498254 KLK14Q9P0G3 267 aa5.86□□□□□ -1.47
CALD1-224ENST00000498254 IQSEC3Q9UPP2 1182 aaPredicted RBP5.86□□□□□ -1.47
CALD1-224ENST00000498254 EML1O00423 815 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 CDK2AP1O14519 115 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 TREHO43280 583 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 ZIC2O95409 532 aaPredicted RBP5.85□□□□□ -1.47
CALD1-224ENST00000498254 CENPCQ03188 943 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 DNM1Q05193 864 aaKnown RBP5.85□□□□□ -1.47
CALD1-224ENST00000498254 CLN3Q13286 438 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 ALKBH2Q6NS38 261 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 STAG2Q8N3U4 1231 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 ABTB2Q8N961 1025 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 NLRP3Q96P20 1036 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 SETDB2Q96T68 719 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 POLIQ9UNA4 740 aa5.85□□□□□ -1.47
CALD1-224ENST00000498254 GPR182O15218 404 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 LDHBP07195 334 aaKnown RBP5.84□□□□□ -1.47
CALD1-224ENST00000498254 NOS2P35228 1153 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 PTGIRP43119 386 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 WDR4P57081 412 aaKnown RBP5.84□□□□□ -1.47
CALD1-224ENST00000498254 FMR1Q06787 632 aaKnown RBP eCLIP5.84□□□□□ -1.47
CALD1-224ENST00000498254 TMEM214Q6NUQ4 689 aaKnown RBP5.84□□□□□ -1.47
CALD1-224ENST00000498254 ETFBKMTQ8IXQ9 262 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 NBPF15Q8N660 670 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 EDEM1Q92611 657 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 L3MBTL2Q969R5 705 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 PHACTR1Q9C0D0 580 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 FHDC1Q9C0D6 1143 aaPredicted RBP5.84□□□□□ -1.47
CALD1-224ENST00000498254 NIF3L1Q9GZT8 377 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 WWC3Q9ULE0 1092 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 HRH3Q9Y5N1 445 aa5.84□□□□□ -1.47
CALD1-224ENST00000498254 TIMP2P16035 220 aa5.83□□□□□ -1.48
CALD1-224ENST00000498254 BRD2P25440 801 aaKnown RBP5.83□□□□□ -1.48
CALD1-224ENST00000498254 XPCQ01831 940 aaPredicted RBP5.83□□□□□ -1.48
CALD1-224ENST00000498254 PLCB3Q01970 1234 aa5.83□□□□□ -1.48
CALD1-224ENST00000498254 EHHADHQ08426 723 aa5.83□□□□□ -1.48
CALD1-224ENST00000498254 TEAD4Q15561 434 aa5.83□□□□□ -1.48
CALD1-224ENST00000498254 MYO19Q96H55 970 aa5.83□□□□□ -1.48
CALD1-224ENST00000498254 ZSCAN10Q96SZ4 725 aaPredicted RBP5.83□□□□□ -1.48
CALD1-224ENST00000498254 DUSP9Q99956 384 aaKnown RBP5.83□□□□□ -1.48
CALD1-224ENST00000498254 BCL11AQ9H165 835 aa5.83□□□□□ -1.48
CALD1-224ENST00000498254 GOLGA2P5Q9HBQ8 144 aa5.83□□□□□ -1.48
CALD1-224ENST00000498254 SOBPA7XYQ1 873 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 GTF2E1P29083 439 aaPredicted RBP5.82□□□□□ -1.48
CALD1-224ENST00000498254 TXLNAP40222 546 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 ZAP70P43403 619 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 PLA2G4AP47712 749 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 COL19A1Q14993 1142 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 RTN1Q16799 776 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 C9orf131Q5VYM1 1079 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 GPR152Q8TDT2 470 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 IFT43Q96FT9 208 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 DMRTB1Q96MA1 342 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 KLF16Q9BXK1 252 aaPredicted RBP5.82□□□□□ -1.48
CALD1-224ENST00000498254 BACH2Q9BYV9 841 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 PARP2Q9UGN5 583 aa5.82□□□□□ -1.48
CALD1-224ENST00000498254 PNMA6FA0A0J9YX94 578 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 A6NHS1 94 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 VAMP1P23763 118 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 PHKA2P46019 1235 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 PDE3BQ13370 1112 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 DSC3Q14574 896 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 C11orf91Q3C1V1 193 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 C8orf34Q49A92 452 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 SLC27A3Q5K4L6 730 aa5.81□□□□□ -1.48
CALD1-224ENST00000498254 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms