RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 LRFN2Q9ULH4 789 aa12.22□□□□□ -0.45
GARNL3-221ENST00000497703 DYRK1BQ9Y463 629 aa12.22□□□□□ -0.45
GARNL3-221ENST00000497703 MPSTP25325 297 aa12.21□□□□□ -0.45
GARNL3-221ENST00000497703 Q6ZNB5 142 aa12.21□□□□□ -0.45
GARNL3-221ENST00000497703 IFT43Q96FT9 208 aa12.21□□□□□ -0.45
GARNL3-221ENST00000497703 KLK14Q9P0G3 267 aa12.21□□□□□ -0.45
GARNL3-221ENST00000497703 NPR3P17342 541 aa12.2□□□□□ -0.46
GARNL3-221ENST00000497703 MSX1P28360 303 aa12.2□□□□□ -0.46
GARNL3-221ENST00000497703 GAS2L1Q99501 681 aaPredicted RBP12.2□□□□□ -0.46
GARNL3-221ENST00000497703 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
GARNL3-221ENST00000497703 NDUFB5O43674 189 aa12.19□□□□□ -0.46
GARNL3-221ENST00000497703 F11P03951 625 aa12.19□□□□□ -0.46
GARNL3-221ENST00000497703 MAPK1P28482 360 aa12.19□□□□□ -0.46
GARNL3-221ENST00000497703 TNFRSF10BO14763 440 aa12.18□□□□□ -0.46
GARNL3-221ENST00000497703 EIF1AXP47813 144 aaKnown RBP12.18□□□□□ -0.46
GARNL3-221ENST00000497703 GPAMQ9HCL2 828 aa12.18□□□□□ -0.46
GARNL3-221ENST00000497703 DCTN4Q9UJW0 460 aa12.18□□□□□ -0.46
GARNL3-221ENST00000497703 BRPF3Q9ULD4 1205 aa12.18□□□□□ -0.46
GARNL3-221ENST00000497703 PCSK2P16519 638 aa12.17□□□□□ -0.46
GARNL3-221ENST00000497703 ERCC3P19447 782 aa12.17□□□□□ -0.46
GARNL3-221ENST00000497703 ATP4AP20648 1035 aa12.17□□□□□ -0.46
GARNL3-221ENST00000497703 EFHC2Q5JST6 749 aa12.17□□□□□ -0.46
GARNL3-221ENST00000497703 TTC16Q8NEE8 873 aa12.17□□□□□ -0.46
GARNL3-221ENST00000497703 DACH1Q9UI36 760 aa12.17□□□□□ -0.46
GARNL3-221ENST00000497703 TGFBR3LH3BV60 316 aa12.16□□□□□ -0.46
GARNL3-221ENST00000497703 ZSCAN29Q8IWY8 852 aaPredicted RBP12.16□□□□□ -0.46
GARNL3-221ENST00000497703 SUSD3Q96L08 255 aa12.16□□□□□ -0.46
GARNL3-221ENST00000497703 TRIM47Q96LD4 638 aa12.16□□□□□ -0.46
GARNL3-221ENST00000497703 A0A1W2PNR3 127 aa12.15□□□□□ -0.46
GARNL3-221ENST00000497703 ARHGAP4P98171 946 aa12.15□□□□□ -0.46
GARNL3-221ENST00000497703 RIPOR1Q6ZS17 1223 aa12.15□□□□□ -0.46
GARNL3-221ENST00000497703 TMC1Q8TDI8 760 aa12.15□□□□□ -0.46
GARNL3-221ENST00000497703 ZAP70P43403 619 aa12.14□□□□□ -0.47
GARNL3-221ENST00000497703 IER5Q5VY09 327 aa12.14□□□□□ -0.47
GARNL3-221ENST00000497703 TREML1Q86YW5 311 aa12.14□□□□□ -0.47
GARNL3-221ENST00000497703 ZIC5Q96T25 663 aa12.14□□□□□ -0.47
GARNL3-221ENST00000497703 H7C1W4 665 aa12.13□□□□□ -0.47
GARNL3-221ENST00000497703 PTSQ03393 145 aa12.13□□□□□ -0.47
GARNL3-221ENST00000497703 LBRQ14739 615 aaKnown RBP12.13□□□□□ -0.47
GARNL3-221ENST00000497703 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
GARNL3-221ENST00000497703 ETFBKMTQ8IXQ9 262 aa12.13□□□□□ -0.47
GARNL3-221ENST00000497703 CITED4Q96RK1 184 aa12.13□□□□□ -0.47
GARNL3-221ENST00000497703 CRISPLD1Q9H336 500 aa12.13□□□□□ -0.47
GARNL3-221ENST00000497703 RUBCNLQ9H714 662 aa12.13□□□□□ -0.47
GARNL3-221ENST00000497703 SOBPA7XYQ1 873 aa12.12□□□□□ -0.47
GARNL3-221ENST00000497703 MICAL2O94851 1124 aa12.12□□□□□ -0.47
GARNL3-221ENST00000497703 EPB42P16452 691 aa12.12□□□□□ -0.47
GARNL3-221ENST00000497703 USP5P45974 858 aa12.12□□□□□ -0.47
GARNL3-221ENST00000497703 NLRP8Q86W28 1048 aa12.12□□□□□ -0.47
GARNL3-221ENST00000497703 HSH2DQ96JZ2 352 aa12.12□□□□□ -0.47
GARNL3-221ENST00000497703 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
GARNL3-221ENST00000497703 PDE3BQ13370 1112 aa12.11□□□□□ -0.47
GARNL3-221ENST00000497703 FIGNL1Q6PIW4 674 aa12.11□□□□□ -0.47
GARNL3-221ENST00000497703 PIK3R5Q8WYR1 880 aa12.11□□□□□ -0.47
GARNL3-221ENST00000497703 GMPR2Q9P2T1 348 aaKnown RBP12.11□□□□□ -0.47
GARNL3-221ENST00000497703 C11orf95C9JLR9 678 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-221ENST00000497703 DNM1Q05193 864 aaKnown RBP12.1□□□□□ -0.47
GARNL3-221ENST00000497703 C7orf43Q8WVR3 580 aa12.1□□□□□ -0.47
GARNL3-221ENST00000497703 ZBTB39O15060 712 aa12.09□□□□□ -0.47
GARNL3-221ENST00000497703 MZF1P28698 734 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-221ENST00000497703 IDH3AP50213 366 aa12.09□□□□□ -0.47
GARNL3-221ENST00000497703 ARSDP51689 593 aa12.09□□□□□ -0.47
GARNL3-221ENST00000497703 ECM1Q16610 540 aa12.09□□□□□ -0.47
GARNL3-221ENST00000497703 BTLAQ7Z6A9 289 aa12.09□□□□□ -0.47
GARNL3-221ENST00000497703 ATCAYQ86WG3 371 aa12.09□□□□□ -0.47
GARNL3-221ENST00000497703 ZNF280CQ8ND82 737 aa12.09□□□□□ -0.47
GARNL3-221ENST00000497703 CEP63Q96MT8 703 aa12.09□□□□□ -0.47
GARNL3-221ENST00000497703 SENP3-EIF4A1A0A087X0R7 540 aa12.08□□□□□ -0.48
GARNL3-221ENST00000497703 BCS1LQ9Y276 419 aa12.08□□□□□ -0.48
GARNL3-221ENST00000497703 SLC35F4A4IF30 521 aa12.07□□□□□ -0.48
GARNL3-221ENST00000497703 CCDC155Q8N6L0 562 aa12.07□□□□□ -0.48
GARNL3-221ENST00000497703 RGS22Q8NE09 1264 aa12.07□□□□□ -0.48
GARNL3-221ENST00000497703 GPR152Q8TDT2 470 aa12.07□□□□□ -0.48
GARNL3-221ENST00000497703 EDEM1Q92611 657 aa12.07□□□□□ -0.48
GARNL3-221ENST00000497703 GMCL1Q96IK5 515 aa12.07□□□□□ -0.48
GARNL3-221ENST00000497703 ASB16Q96NS5 453 aa12.07□□□□□ -0.48
GARNL3-221ENST00000497703 RBCK1Q9BYM8 510 aa12.07□□□□□ -0.48
GARNL3-221ENST00000497703 NUCKS1Q9H1E3 243 aaKnown RBP12.07□□□□□ -0.48
GARNL3-221ENST00000497703 FNDC3AQ9Y2H6 1198 aaKnown RBP12.07□□□□□ -0.48
GARNL3-221ENST00000497703 FZD6O60353 706 aa12.06□□□□□ -0.48
GARNL3-221ENST00000497703 CCDC87Q9NVE4 849 aa12.06□□□□□ -0.48
GARNL3-221ENST00000497703 ANKRD33BA6NCL7 494 aa12.05□□□□□ -0.48
GARNL3-221ENST00000497703 EHHADHQ08426 723 aa12.05□□□□□ -0.48
GARNL3-221ENST00000497703 SAMD5Q5TGI4 173 aa12.05□□□□□ -0.48
GARNL3-221ENST00000497703 RGL4Q8IZJ4 473 aa12.05□□□□□ -0.48
GARNL3-221ENST00000497703 DMRTB1Q96MA1 342 aa12.05□□□□□ -0.48
GARNL3-221ENST00000497703 POLIQ9UNA4 740 aa12.05□□□□□ -0.48
GARNL3-221ENST00000497703 PDGFAP04085 211 aa12.04□□□□□ -0.48
GARNL3-221ENST00000497703 FAM26DQ5JW98 314 aa12.04□□□□□ -0.48
GARNL3-221ENST00000497703 FOXR1Q6PIV2 292 aa12.04□□□□□ -0.48
GARNL3-221ENST00000497703 ATXN7O15265 892 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-221ENST00000497703 SNRPBP14678 240 aaKnown RBP12.03□□□□□ -0.48
GARNL3-221ENST00000497703 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
GARNL3-221ENST00000497703 DNAJC14Q6Y2X3 702 aaPredicted RBP12.03□□□□□ -0.48
GARNL3-221ENST00000497703 TRIM22Q8IYM9 498 aa12.03□□□□□ -0.48
GARNL3-221ENST00000497703 NUDT16Q96DE0 195 aaKnown RBP12.03□□□□□ -0.48
GARNL3-221ENST00000497703 BRD7Q9NPI1 651 aa12.03□□□□□ -0.48
GARNL3-221ENST00000497703 PCDHGC4Q9Y5F7 938 aa12.03□□□□□ -0.48
GARNL3-221ENST00000497703 ITGA6P23229 1130 aa12.02□□□□□ -0.49
GARNL3-221ENST00000497703 INPP5BP32019 993 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms