RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 AAMPQ13685 434 aa18.04■□□□□ 0.48
VPS26A-209ENST00000497564 RC3H1Q5TC82 1133 aaKnown RBP18.04■□□□□ 0.48
VPS26A-209ENST00000497564 VSIG10Q8N0Z9 540 aa18.04■□□□□ 0.48
VPS26A-209ENST00000497564 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
VPS26A-209ENST00000497564 DBF4Q9UBU7 674 aaPredicted RBP18.04■□□□□ 0.48
VPS26A-209ENST00000497564 ERBB4Q15303 1308 aa18.03■□□□□ 0.48
VPS26A-209ENST00000497564 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
VPS26A-209ENST00000497564 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
VPS26A-209ENST00000497564 RTCBQ9Y3I0 505 aaKnown RBP18.03■□□□□ 0.48
VPS26A-209ENST00000497564 PRAMEF22A3QJZ6 481 aa18.02■□□□□ 0.48
VPS26A-209ENST00000497564 RPS6KA4O75676 772 aa18.02■□□□□ 0.48
VPS26A-209ENST00000497564 FLIIQ13045 1269 aa18.02■□□□□ 0.48
VPS26A-209ENST00000497564 MVPQ14764 893 aaKnown RBP18.02■□□□□ 0.48
VPS26A-209ENST00000497564 G2E3Q7L622 706 aa18.02■□□□□ 0.48
VPS26A-209ENST00000497564 ARHGEF1Q92888 912 aaKnown RBP18.02■□□□□ 0.48
VPS26A-209ENST00000497564 DDX21Q9NR30 783 aaKnown RBP eCLIP18.02■□□□□ 0.48
VPS26A-209ENST00000497564 CHPF2Q9P2E5 772 aa18.02■□□□□ 0.48
VPS26A-209ENST00000497564 ARFGEF2Q9Y6D5 1785 aa18.02■□□□□ 0.47
VPS26A-209ENST00000497564 C4AP0C0L4 1744 aa18.01■□□□□ 0.47
VPS26A-209ENST00000497564 NLGN2Q8NFZ4 835 aa18.01■□□□□ 0.47
VPS26A-209ENST00000497564 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
VPS26A-209ENST00000497564 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
VPS26A-209ENST00000497564 COG6Q9Y2V7 657 aa18.01■□□□□ 0.47
VPS26A-209ENST00000497564 CYP19A1P11511 503 aaPredicted RBP18■□□□□ 0.47
VPS26A-209ENST00000497564 TRAPPC3LQ5T215 181 aa18■□□□□ 0.47
VPS26A-209ENST00000497564 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
VPS26A-209ENST00000497564 HYPKQ9NX55 129 aa18■□□□□ 0.47
VPS26A-209ENST00000497564 PDIA6Q15084 440 aa17.99■□□□□ 0.47
VPS26A-209ENST00000497564 TMEM57Q8N5G2 664 aa17.99■□□□□ 0.47
VPS26A-209ENST00000497564 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
VPS26A-209ENST00000497564 SRP68Q9UHB9 627 aaKnown RBP17.99■□□□□ 0.47
VPS26A-209ENST00000497564 DDX19BQ9UMR2 479 aa17.99■□□□□ 0.47
VPS26A-209ENST00000497564 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
VPS26A-209ENST00000497564 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
VPS26A-209ENST00000497564 INTS3Q68E01 1043 aaKnown RBP17.98■□□□□ 0.47
VPS26A-209ENST00000497564 ZBTB1Q9Y2K1 713 aa17.98■□□□□ 0.47
VPS26A-209ENST00000497564 GYS1P13807 737 aa17.97■□□□□ 0.47
VPS26A-209ENST00000497564 ADRA2BP18089 450 aa17.97■□□□□ 0.47
VPS26A-209ENST00000497564 RFC4P35249 363 aa17.96■□□□□ 0.47
VPS26A-209ENST00000497564 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
VPS26A-209ENST00000497564 PROSER3Q2NL68 480 aa17.96■□□□□ 0.47
VPS26A-209ENST00000497564 LRP10Q7Z4F1 713 aa17.96■□□□□ 0.47
VPS26A-209ENST00000497564 ITPRIPQ8IWB1 547 aa17.96■□□□□ 0.47
VPS26A-209ENST00000497564 CHMP4BQ9H444 224 aaKnown RBP17.96■□□□□ 0.47
VPS26A-209ENST00000497564 PHAXQ9H814 394 aaKnown RBP17.96■□□□□ 0.47
VPS26A-209ENST00000497564 MMP10P09238 476 aa17.95■□□□□ 0.46
VPS26A-209ENST00000497564 ATP10DQ9P241 1426 aa17.95■□□□□ 0.46
VPS26A-209ENST00000497564 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
VPS26A-209ENST00000497564 CCT4P50991 539 aaKnown RBP17.94■□□□□ 0.46
VPS26A-209ENST00000497564 USP42Q9H9J4 1324 aaKnown RBP17.94■□□□□ 0.46
VPS26A-209ENST00000497564 ADCY9O60503 1353 aa17.93■□□□□ 0.46
VPS26A-209ENST00000497564 IBTKQ9P2D0 1353 aaPredicted RBP17.93■□□□□ 0.46
VPS26A-209ENST00000497564 STARD3NLO95772 234 aa17.93■□□□□ 0.46
VPS26A-209ENST00000497564 ANXA1P04083 346 aa17.93■□□□□ 0.46
VPS26A-209ENST00000497564 CCDC136Q96JN2 1154 aa17.93■□□□□ 0.46
VPS26A-209ENST00000497564 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
VPS26A-209ENST00000497564 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
VPS26A-209ENST00000497564 NBPF15Q8N660 670 aa17.92■□□□□ 0.46
VPS26A-209ENST00000497564 ZBTB40Q9NUA8 1239 aa17.92■□□□□ 0.46
VPS26A-209ENST00000497564 NUP98P52948 1817 aa17.92■□□□□ 0.46
VPS26A-209ENST00000497564 COL15A1P39059 1388 aa17.91■□□□□ 0.46
VPS26A-209ENST00000497564 F6X3S4 739 aa17.91■□□□□ 0.46
VPS26A-209ENST00000497564 ZBTB7BO15156 539 aaPredicted RBP17.91■□□□□ 0.46
VPS26A-209ENST00000497564 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
VPS26A-209ENST00000497564 A1BGP04217 495 aa17.91■□□□□ 0.46
VPS26A-209ENST00000497564 B4GALNT3Q6L9W6 998 aa17.91■□□□□ 0.46
VPS26A-209ENST00000497564 KSR2Q6VAB6 950 aa17.91■□□□□ 0.46
VPS26A-209ENST00000497564 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
VPS26A-209ENST00000497564 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
VPS26A-209ENST00000497564 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
VPS26A-209ENST00000497564 DNAAF4Q8WXU2 420 aa17.9■□□□□ 0.46
VPS26A-209ENST00000497564 CD2APQ9Y5K6 639 aa17.9■□□□□ 0.46
VPS26A-209ENST00000497564 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
VPS26A-209ENST00000497564 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
VPS26A-209ENST00000497564 MYL6BP14649 208 aa17.89■□□□□ 0.45
VPS26A-209ENST00000497564 EIF5P55010 431 aaKnown RBP17.89■□□□□ 0.45
VPS26A-209ENST00000497564 DDR1Q08345 913 aa17.89■□□□□ 0.45
VPS26A-209ENST00000497564 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
VPS26A-209ENST00000497564 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
VPS26A-209ENST00000497564 XAGE3Q8WTP9 111 aa17.89■□□□□ 0.45
VPS26A-209ENST00000497564 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
VPS26A-209ENST00000497564 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.45
VPS26A-209ENST00000497564 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
VPS26A-209ENST00000497564 YBX3P16989 372 aaKnown RBP eCLIP17.88■□□□□ 0.45
VPS26A-209ENST00000497564 GPR162Q16538 588 aa17.88■□□□□ 0.45
VPS26A-209ENST00000497564 COPS6Q7L5N1 327 aa17.88■□□□□ 0.45
VPS26A-209ENST00000497564 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
VPS26A-209ENST00000497564 NARFQ9UHQ1 456 aa17.87■□□□□ 0.45
VPS26A-209ENST00000497564 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
VPS26A-209ENST00000497564 ZNF330Q9Y3S2 320 aaPredicted RBP17.87■□□□□ 0.45
VPS26A-209ENST00000497564 ZPR1O75312 459 aa17.86■□□□□ 0.45
VPS26A-209ENST00000497564 BEND3Q5T5X7 828 aa17.86■□□□□ 0.45
VPS26A-209ENST00000497564 SRCIN1Q9C0H9 1055 aa17.86■□□□□ 0.45
VPS26A-209ENST00000497564 C10orf71Q711Q0 1435 aa17.86■□□□□ 0.45
VPS26A-209ENST00000497564 KIAA1551Q9HCM1 1747 aa17.86■□□□□ 0.45
VPS26A-209ENST00000497564 ALDH1L1O75891 902 aa17.85■□□□□ 0.45
VPS26A-209ENST00000497564 TM4SF1P30408 202 aa17.85■□□□□ 0.45
VPS26A-209ENST00000497564 AIMP1Q12904 312 aaKnown RBP17.85■□□□□ 0.45
VPS26A-209ENST00000497564 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
VPS26A-209ENST00000497564 KDM2BQ8NHM5 1336 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms