RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 S100BP04271 92 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-224ENST00000497488 ERFEQ4G0M1 354 aa8.3□□□□□ -1.08
BRCA1-224ENST00000497488 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
BRCA1-224ENST00000497488 ATCAYQ86WG3 371 aa8.3□□□□□ -1.08
BRCA1-224ENST00000497488 TSPAN10Q9H1Z9 355 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-224ENST00000497488 G3BP2Q9UN86 482 aaKnown RBP8.3□□□□□ -1.08
BRCA1-224ENST00000497488 ABCC9O60706 1549 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 A0A1W2PRU2 124 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 USP5P45974 858 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 EPHA4P54764 986 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 SMC5Q8IY18 1101 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 SEPT12Q8IYM1 358 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
BRCA1-224ENST00000497488 RASGRP4Q8TDF6 673 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
BRCA1-224ENST00000497488 NBPF3Q9H094 633 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 TMX1Q9H3N1 280 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 NEUROD4Q9HD90 331 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 SIRPGQ9P1W8 387 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
BRCA1-224ENST00000497488 BACH1O14867 736 aa8.28□□□□□ -1.08
BRCA1-224ENST00000497488 MMP16P51512 607 aa8.28□□□□□ -1.08
BRCA1-224ENST00000497488 AMPD3Q01432 767 aa8.28□□□□□ -1.08
BRCA1-224ENST00000497488 SLC10A4Q96EP9 437 aa8.28□□□□□ -1.08
BRCA1-224ENST00000497488 STAC3Q96MF2 364 aa8.28□□□□□ -1.08
BRCA1-224ENST00000497488 UNC93B1Q9H1C4 597 aa8.28□□□□□ -1.08
BRCA1-224ENST00000497488 GABBR1Q9UBS5 961 aa8.28□□□□□ -1.08
BRCA1-224ENST00000497488 WASLO00401 505 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-224ENST00000497488 PPP1R12BO60237 982 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-224ENST00000497488 SCNN1DP51172 638 aa8.27□□□□□ -1.09
BRCA1-224ENST00000497488 FAM26DQ5JW98 314 aa8.27□□□□□ -1.09
BRCA1-224ENST00000497488 PMM1Q92871 262 aa8.27□□□□□ -1.09
BRCA1-224ENST00000497488 KCTD12Q96CX2 325 aaKnown RBP8.27□□□□□ -1.09
BRCA1-224ENST00000497488 SEC16BQ96JE7 1060 aa8.27□□□□□ -1.09
BRCA1-224ENST00000497488 ZNF408Q9H9D4 720 aa8.27□□□□□ -1.09
BRCA1-224ENST00000497488 V9GY48 417 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-224ENST00000497488 EIF1AYO14602 144 aaKnown RBP8.26□□□□□ -1.09
BRCA1-224ENST00000497488 NR1I2O75469 434 aa8.26□□□□□ -1.09
BRCA1-224ENST00000497488 EIF3JO75822 258 aaKnown RBP8.26□□□□□ -1.09
BRCA1-224ENST00000497488 SSBP05455 408 aaKnown RBP eCLIP8.26□□□□□ -1.09
BRCA1-224ENST00000497488 ORC1Q13415 861 aa8.26□□□□□ -1.09
BRCA1-224ENST00000497488 TAF7LQ5H9L4 462 aa8.26□□□□□ -1.09
BRCA1-224ENST00000497488 ERMP1Q7Z2K6 904 aa8.26□□□□□ -1.09
BRCA1-224ENST00000497488 STAG2Q8N3U4 1231 aa8.26□□□□□ -1.09
BRCA1-224ENST00000497488 SLKQ9H2G2 1235 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-224ENST00000497488 QTRT2Q9H974 415 aaKnown RBP8.26□□□□□ -1.09
BRCA1-224ENST00000497488 TYW1Q9NV66 732 aaKnown RBP8.26□□□□□ -1.09
BRCA1-224ENST00000497488 LRFN2Q9ULH4 789 aa8.26□□□□□ -1.09
BRCA1-224ENST00000497488 OPLAHO14841 1288 aa8.25□□□□□ -1.09
BRCA1-224ENST00000497488 PDGFRBP09619 1106 aa8.25□□□□□ -1.09
BRCA1-224ENST00000497488 NFX1Q12986 1120 aaKnown RBP8.25□□□□□ -1.09
BRCA1-224ENST00000497488 TAF1CQ15572 869 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-224ENST00000497488 CCDC146Q8IYE0 955 aa8.25□□□□□ -1.09
BRCA1-224ENST00000497488 FAM160A2Q8N612 972 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-224ENST00000497488 MYO19Q96H55 970 aa8.25□□□□□ -1.09
BRCA1-224ENST00000497488 C2orf49Q9BVC5 232 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-224ENST00000497488 C12orf49Q9H741 205 aa8.25□□□□□ -1.09
BRCA1-224ENST00000497488 SNTG2Q9NY99 539 aa8.25□□□□□ -1.09
BRCA1-224ENST00000497488 CDC45O75419 566 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 PDGFAP04085 211 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 SCTRP47872 440 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 ST13P50502 369 aaKnown RBP8.24□□□□□ -1.09
BRCA1-224ENST00000497488 GDF10P55107 478 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 DNM1Q05193 864 aaKnown RBP8.24□□□□□ -1.09
BRCA1-224ENST00000497488 MEI1Q5TIA1 1274 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 BPHLQ86WA6 291 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-224ENST00000497488 FMNL3Q8IVF7 1028 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 CCAR1Q8IX12 1150 aaKnown RBP8.24□□□□□ -1.09
BRCA1-224ENST00000497488 NKX2-3Q8TAU0 364 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 EDEM1Q92611 657 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 WNT2BQ93097 391 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 ZFRQ96KR1 1074 aaKnown RBP8.24□□□□□ -1.09
BRCA1-224ENST00000497488 DNAJC25Q9H1X3 360 aa8.24□□□□□ -1.09
BRCA1-224ENST00000497488 TBX4P57082 545 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 RASA3Q14644 834 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 PTCRAQ6ISU1 281 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-224ENST00000497488 ANKS3Q6ZW76 656 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 JDP2Q8WYK2 163 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 DEPDC7Q96QD5 511 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 TRIM55Q9BYV6 548 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 COPRSQ9NQ92 184 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 FANCLQ9NW38 375 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 PRR12Q9ULL5 1215 aa8.23□□□□□ -1.09
BRCA1-224ENST00000497488 GOLGA8CPA6NN73 597 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 GIPC1O14908 333 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 KLF4O43474 513 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 STAU1O95793 577 aaKnown RBP8.22□□□□□ -1.09
BRCA1-224ENST00000497488 CHMP4BP1P59074 171 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 FOXK2Q01167 660 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 RAB33AQ14088 237 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.22□□□□□ -1.09
BRCA1-224ENST00000497488 C4orf48Q5BLP8 95 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 PRDM9Q9NQV7 894 aa8.22□□□□□ -1.09
BRCA1-224ENST00000497488 FAM221BA6H8Z2 402 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 INHAP05111 366 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 NEFLP07196 543 aa8.21□□□□□ -1.1
BRCA1-224ENST00000497488 ETFBP38117 255 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms