RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ZNF853P0CG23 659 aa14.92□□□□□ -0.02
HLA-B-254ENST00000497377 DIEXFQ68CQ4 756 aaKnown RBP14.92□□□□□ -0.02
HLA-B-254ENST00000497377 SYT17Q9BSW7 474 aa14.92□□□□□ -0.02
HLA-B-254ENST00000497377 SRP68Q9UHB9 627 aaKnown RBP14.92□□□□□ -0.02
HLA-B-254ENST00000497377 FKBP8Q14318 412 aa14.91□□□□□ -0.02
HLA-B-254ENST00000497377 USPL1Q5W0Q7 1092 aa14.91□□□□□ -0.02
HLA-B-254ENST00000497377 WWC1Q8IX03 1113 aa14.91□□□□□ -0.02
HLA-B-254ENST00000497377 CD2APQ9Y5K6 639 aa14.91□□□□□ -0.02
HLA-B-254ENST00000497377 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
HLA-B-254ENST00000497377 RGL2O15211 777 aa14.9□□□□□ -0.02
HLA-B-254ENST00000497377 HOXB7P09629 217 aa14.9□□□□□ -0.02
HLA-B-254ENST00000497377 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
HLA-B-254ENST00000497377 ZNF330Q9Y3S2 320 aaPredicted RBP14.9□□□□□ -0.02
HLA-B-254ENST00000497377 PARP3Q9Y6F1 533 aa14.9□□□□□ -0.02
HLA-B-254ENST00000497377 IL16Q14005 1332 aa14.9□□□□□ -0.02
HLA-B-254ENST00000497377 NBPF26B4DH59 902 aa14.89□□□□□ -0.03
HLA-B-254ENST00000497377 NBPF10Q6P3W6 841 aaKnown RBP14.89□□□□□ -0.03
HLA-B-254ENST00000497377 DZIP3Q86Y13 1208 aaKnown RBP14.89□□□□□ -0.03
HLA-B-254ENST00000497377 NBPF15Q8N660 670 aa14.89□□□□□ -0.03
HLA-B-254ENST00000497377 PHF12Q96QT6 1004 aa14.89□□□□□ -0.03
HLA-B-254ENST00000497377 MBIPQ9NS73 344 aa14.89□□□□□ -0.03
HLA-B-254ENST00000497377 BCORQ6W2J9 1755 aa14.88□□□□□ -0.03
HLA-B-254ENST00000497377 TM4SF1P30408 202 aa14.88□□□□□ -0.03
HLA-B-254ENST00000497377 WDR63Q8IWG1 891 aa14.88□□□□□ -0.03
HLA-B-254ENST00000497377 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
HLA-B-254ENST00000497377 CHMP4AQ9BY43 222 aa14.88□□□□□ -0.03
HLA-B-254ENST00000497377 TBC1D2BQ9UPU7 963 aa14.88□□□□□ -0.03
HLA-B-254ENST00000497377 CAMTA2O94983 1202 aa14.87□□□□□ -0.03
HLA-B-254ENST00000497377 CLEC4GQ6UXB4 293 aa14.87□□□□□ -0.03
HLA-B-254ENST00000497377 BCL2L12Q9HB09 334 aa14.87□□□□□ -0.03
HLA-B-254ENST00000497377 ZNF652Q9Y2D9 606 aa14.87□□□□□ -0.03
HLA-B-254ENST00000497377 KIF13BQ9NQT8 1826 aa14.87□□□□□ -0.03
HLA-B-254ENST00000497377 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
HLA-B-254ENST00000497377 EIF2S2P20042 333 aaKnown RBP14.86□□□□□ -0.03
HLA-B-254ENST00000497377 PIP4K2AP48426 406 aaPredicted RBP14.86□□□□□ -0.03
HLA-B-254ENST00000497377 NFIXQ14938 502 aa14.86□□□□□ -0.03
HLA-B-254ENST00000497377 LHX8Q68G74 356 aa14.86□□□□□ -0.03
HLA-B-254ENST00000497377 C10orf71Q711Q0 1435 aa14.85□□□□□ -0.03
HLA-B-254ENST00000497377 POLRMTO00411 1230 aaKnown RBP14.85□□□□□ -0.03
HLA-B-254ENST00000497377 DDR1Q08345 913 aa14.85□□□□□ -0.03
HLA-B-254ENST00000497377 DUSP27Q5VZP5 1158 aa14.85□□□□□ -0.03
HLA-B-254ENST00000497377 NRXN2Q9P2S2 1712 aa14.84□□□□□ -0.03
HLA-B-254ENST00000497377 ERVV-1B6SEH8 477 aa14.84□□□□□ -0.03
HLA-B-254ENST00000497377 MYL6BP14649 208 aa14.84□□□□□ -0.03
HLA-B-254ENST00000497377 KRT24Q2M2I5 525 aa14.84□□□□□ -0.03
HLA-B-254ENST00000497377 HDGFL1Q5TGJ6 251 aa14.84□□□□□ -0.03
HLA-B-254ENST00000497377 KIF6Q6ZMV9 814 aa14.84□□□□□ -0.03
HLA-B-254ENST00000497377 DDX21Q9NR30 783 aaKnown RBP eCLIP14.84□□□□□ -0.03
HLA-B-254ENST00000497377 CARMIL3Q8ND23 1372 aa14.84□□□□□ -0.03
HLA-B-254ENST00000497377 TGFB2P61812 414 aa14.83□□□□□ -0.04
HLA-B-254ENST00000497377 PDIA6Q15084 440 aa14.83□□□□□ -0.04
HLA-B-254ENST00000497377 TBC1D9BQ66K14 1250 aa14.83□□□□□ -0.04
HLA-B-254ENST00000497377 NLGN2Q8NFZ4 835 aa14.83□□□□□ -0.04
HLA-B-254ENST00000497377 SETDB2Q96T68 719 aa14.83□□□□□ -0.04
HLA-B-254ENST00000497377 DBF4Q9UBU7 674 aaPredicted RBP14.83□□□□□ -0.04
HLA-B-254ENST00000497377 MAP3K15Q6ZN16 1313 aa14.83□□□□□ -0.04
HLA-B-254ENST00000497377 AFDNP55196 1824 aaKnown RBP14.82□□□□□ -0.04
HLA-B-254ENST00000497377 SERPINB2P05120 415 aa14.82□□□□□ -0.04
HLA-B-254ENST00000497377 LRP10Q7Z4F1 713 aa14.82□□□□□ -0.04
HLA-B-254ENST00000497377 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
HLA-B-254ENST00000497377 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
HLA-B-254ENST00000497377 SALL2Q9Y467 1007 aaPredicted RBP14.82□□□□□ -0.04
HLA-B-254ENST00000497377 SENP3-EIF4A1A0A087X0R7 540 aa14.81□□□□□ -0.04
HLA-B-254ENST00000497377 BICDL1Q6ZP65 573 aa14.81□□□□□ -0.04
HLA-B-254ENST00000497377 MYH16Q9H6N6 1097 aa14.81□□□□□ -0.04
HLA-B-254ENST00000497377 NUP98P52948 1817 aa14.8□□□□□ -0.04
HLA-B-254ENST00000497377 TTLL7Q6ZT98 887 aa14.8□□□□□ -0.04
HLA-B-254ENST00000497377 C8orf58Q8NAV2 365 aa14.8□□□□□ -0.04
HLA-B-254ENST00000497377 NECTIN2Q92692 538 aa14.8□□□□□ -0.04
HLA-B-254ENST00000497377 TSR2Q969E8 191 aaKnown RBP14.8□□□□□ -0.04
HLA-B-254ENST00000497377 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
HLA-B-254ENST00000497377 CHPF2Q9P2E5 772 aa14.8□□□□□ -0.04
HLA-B-254ENST00000497377 PXDNLA1KZ92 1463 aa14.79□□□□□ -0.04
HLA-B-254ENST00000497377 GOLGA2Q08379 1002 aa14.79□□□□□ -0.04
HLA-B-254ENST00000497377 PROSER3Q2NL68 480 aa14.79□□□□□ -0.04
HLA-B-254ENST00000497377 CCDC30Q5VVM6 783 aa14.79□□□□□ -0.04
HLA-B-254ENST00000497377 ZNF521Q96K83 1311 aa14.79□□□□□ -0.04
HLA-B-254ENST00000497377 FANCIQ9NVI1 1328 aa14.79□□□□□ -0.04
HLA-B-254ENST00000497377 ATP10DQ9P241 1426 aa14.79□□□□□ -0.04
HLA-B-254ENST00000497377 KIAA1551Q9HCM1 1747 aa14.78□□□□□ -0.04
HLA-B-254ENST00000497377 ELL2O00472 640 aaPredicted RBP14.78□□□□□ -0.04
HLA-B-254ENST00000497377 HLFQ16534 295 aa14.78□□□□□ -0.04
HLA-B-254ENST00000497377 GPR162Q16538 588 aa14.78□□□□□ -0.04
HLA-B-254ENST00000497377 GIGYF2Q6Y7W6 1299 aaKnown RBP14.78□□□□□ -0.04
HLA-B-254ENST00000497377 COPS6Q7L5N1 327 aa14.78□□□□□ -0.04
HLA-B-254ENST00000497377 PDZRN3Q9UPQ7 1066 aa14.78□□□□□ -0.04
HLA-B-254ENST00000497377 NIP7Q9Y221 180 aaKnown RBP eCLIP14.78□□□□□ -0.04
HLA-B-254ENST00000497377 NPHP1O15259 732 aa14.77□□□□□ -0.05
HLA-B-254ENST00000497377 ANXA1P04083 346 aa14.77□□□□□ -0.05
HLA-B-254ENST00000497377 TWISTNBQ3B726 338 aaPredicted RBP14.77□□□□□ -0.05
HLA-B-254ENST00000497377 HSP90AB3PQ58FF7 597 aa14.77□□□□□ -0.05
HLA-B-254ENST00000497377 CNBD1Q8NA66 436 aa14.77□□□□□ -0.05
HLA-B-254ENST00000497377 XAGE3Q8WTP9 111 aa14.77□□□□□ -0.05
HLA-B-254ENST00000497377 ZBTB3Q9H5J0 574 aa14.77□□□□□ -0.05
HLA-B-254ENST00000497377 N4BP2Q86UW6 1770 aaPredicted RBP14.77□□□□□ -0.05
HLA-B-254ENST00000497377 IBTKQ9P2D0 1353 aaPredicted RBP14.76□□□□□ -0.05
HLA-B-254ENST00000497377 GRIN3BO60391 1043 aa14.76□□□□□ -0.05
HLA-B-254ENST00000497377 ST5P78524 1137 aa14.76□□□□□ -0.05
HLA-B-254ENST00000497377 AIMP1Q12904 312 aaKnown RBP14.76□□□□□ -0.05
HLA-B-254ENST00000497377 PRR5LQ6MZQ0 368 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms