RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PPP1R15AO75807 674 aaPredicted RBP7.45□□□□□ -1.22
SMC4-225ENST00000497203 TATP17735 454 aaPredicted RBP7.45□□□□□ -1.22
SMC4-225ENST00000497203 MARSP56192 900 aaKnown RBP7.45□□□□□ -1.22
SMC4-225ENST00000497203 GAS6Q14393 721 aa7.45□□□□□ -1.22
SMC4-225ENST00000497203 KLRG1Q96E93 195 aa7.45□□□□□ -1.22
SMC4-225ENST00000497203 ZIC5Q96T25 663 aa7.45□□□□□ -1.22
SMC4-225ENST00000497203 HCN4Q9Y3Q4 1203 aa7.45□□□□□ -1.22
SMC4-225ENST00000497203 ACIN1Q9UKV3 1341 aaKnown RBP7.45□□□□□ -1.22
SMC4-225ENST00000497203 A0A1W2PNR3 127 aa7.44□□□□□ -1.22
SMC4-225ENST00000497203 IGFBP4P22692 258 aa7.44□□□□□ -1.22
SMC4-225ENST00000497203 WEE1P30291 646 aa7.44□□□□□ -1.22
SMC4-225ENST00000497203 HIRAP54198 1017 aaPredicted RBP7.44□□□□□ -1.22
SMC4-225ENST00000497203 ARSJQ5FYB0 599 aaPredicted RBP7.44□□□□□ -1.22
SMC4-225ENST00000497203 EFHC2Q5JST6 749 aa7.44□□□□□ -1.22
SMC4-225ENST00000497203 C7orf43Q8WVR3 580 aa7.44□□□□□ -1.22
SMC4-225ENST00000497203 C2orf49Q9BVC5 232 aaPredicted RBP7.44□□□□□ -1.22
SMC4-225ENST00000497203 ADAMTS2O95450 1211 aa7.43□□□□□ -1.22
SMC4-225ENST00000497203 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
SMC4-225ENST00000497203 SWI5Q1ZZU3 235 aa7.43□□□□□ -1.22
SMC4-225ENST00000497203 STAG2Q8N3U4 1231 aa7.43□□□□□ -1.22
SMC4-225ENST00000497203 PRIMPOLQ96LW4 560 aa7.43□□□□□ -1.22
SMC4-225ENST00000497203 CHMP3Q9Y3E7 222 aa7.43□□□□□ -1.22
SMC4-225ENST00000497203 PRMT3O60678 531 aa7.42□□□□□ -1.22
SMC4-225ENST00000497203 PDIA4P13667 645 aaKnown RBP7.42□□□□□ -1.22
SMC4-225ENST00000497203 FOXR1Q6PIV2 292 aa7.42□□□□□ -1.22
SMC4-225ENST00000497203 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
SMC4-225ENST00000497203 PHACTR1Q9C0D0 580 aa7.42□□□□□ -1.22
SMC4-225ENST00000497203 SRSF11Q05519 484 aaKnown RBP7.41□□□□□ -1.22
SMC4-225ENST00000497203 OCLNQ16625 522 aa7.41□□□□□ -1.22
SMC4-225ENST00000497203 C1orf53Q5VUE5 145 aa7.41□□□□□ -1.22
SMC4-225ENST00000497203 LYPD4Q6UWN0 246 aa7.41□□□□□ -1.22
SMC4-225ENST00000497203 NLRP8Q86W28 1048 aa7.41□□□□□ -1.22
SMC4-225ENST00000497203 TRERF1Q96PN7 1200 aa7.41□□□□□ -1.22
SMC4-225ENST00000497203 ZCCHC2Q9C0B9 1178 aaKnown RBP7.41□□□□□ -1.22
SMC4-225ENST00000497203 NDFIP2Q9NV92 336 aa7.41□□□□□ -1.22
SMC4-225ENST00000497203 SLAIN2Q9P270 581 aa7.41□□□□□ -1.22
SMC4-225ENST00000497203 BNIP3LO60238 219 aa7.4□□□□□ -1.22
SMC4-225ENST00000497203 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
SMC4-225ENST00000497203 PLA2G4EQ3MJ16 856 aa7.4□□□□□ -1.22
SMC4-225ENST00000497203 LRRC69Q6ZNQ3 347 aa7.4□□□□□ -1.22
SMC4-225ENST00000497203 ALDH16A1Q8IZ83 802 aa7.4□□□□□ -1.22
SMC4-225ENST00000497203 RHPN1Q8TCX5 695 aa7.4□□□□□ -1.22
SMC4-225ENST00000497203 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
SMC4-225ENST00000497203 NGLY1Q96IV0 654 aa7.4□□□□□ -1.22
SMC4-225ENST00000497203 HCN2Q9UL51 889 aa7.4□□□□□ -1.22
SMC4-225ENST00000497203 MSTNO14793 375 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 FOXO3O43524 673 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 ITGB2P05107 769 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 CELA2BP08218 269 aaPredicted RBP7.39□□□□□ -1.23
SMC4-225ENST00000497203 MAP3K10Q02779 954 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 PDE4CQ08493 712 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 FIGNL1Q6PIW4 674 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 HSH2DQ96JZ2 352 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 CFHR5Q9BXR6 569 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 PCDHGC4Q9Y5F7 938 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 GJA3Q9Y6H8 435 aa7.39□□□□□ -1.23
SMC4-225ENST00000497203 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
SMC4-225ENST00000497203 CLP1Q92989 425 aaKnown RBP7.38□□□□□ -1.23
SMC4-225ENST00000497203 SPOCK3Q9BQ16 436 aa7.38□□□□□ -1.23
SMC4-225ENST00000497203 MBIPQ9NS73 344 aa7.38□□□□□ -1.23
SMC4-225ENST00000497203 ATXN7L1Q9ULK2 861 aaPredicted RBP7.38□□□□□ -1.23
SMC4-225ENST00000497203 GPC6Q9Y625 555 aaPredicted RBP7.38□□□□□ -1.23
SMC4-225ENST00000497203 DCDC2BA2VCK2 349 aa7.37□□□□□ -1.23
SMC4-225ENST00000497203 CARNS1A5YM72 827 aa7.37□□□□□ -1.23
SMC4-225ENST00000497203 TMEM88BA6NKF7 163 aa7.37□□□□□ -1.23
SMC4-225ENST00000497203 MX2P20592 715 aa7.37□□□□□ -1.23
SMC4-225ENST00000497203 ZNF280CQ8ND82 737 aa7.37□□□□□ -1.23
SMC4-225ENST00000497203 DCAF5Q96JK2 942 aa7.37□□□□□ -1.23
SMC4-225ENST00000497203 QTRT2Q9H974 415 aaKnown RBP7.37□□□□□ -1.23
SMC4-225ENST00000497203 CXXC1Q9P0U4 656 aaPredicted RBP7.37□□□□□ -1.23
SMC4-225ENST00000497203 PHF24Q9UPV7 400 aa7.37□□□□□ -1.23
SMC4-225ENST00000497203 BTBD11A6QL63 1104 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 PROCP04070 461 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 MAPTP10636 758 aaKnown RBP7.36□□□□□ -1.23
SMC4-225ENST00000497203 TNP2Q05952 138 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 RTN1Q16799 776 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 SAMD5Q5TGI4 173 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 CAPN12Q6ZSI9 719 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 SUSD3Q96L08 255 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 NEUROD4Q9HD90 331 aa7.36□□□□□ -1.23
SMC4-225ENST00000497203 IGF1RP08069 1367 aa7.35□□□□□ -1.23
SMC4-225ENST00000497203 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
SMC4-225ENST00000497203 FAM157BP0CG42 384 aa7.35□□□□□ -1.23
SMC4-225ENST00000497203 FGFR3P22607 806 aa7.35□□□□□ -1.23
SMC4-225ENST00000497203 CTBSQ01459 385 aa7.35□□□□□ -1.23
SMC4-225ENST00000497203 MKNK1Q9BUB5 465 aa7.35□□□□□ -1.23
SMC4-225ENST00000497203 PHF20L1A8MW92 1017 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 C2CD2LO14523 706 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 EFSO43281 561 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 CD33P20138 364 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 ATP2B4P23634 1241 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 TRAIPQ9BWF2 469 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 STRN4Q9NRL3 753 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 ENAMQ9NRM1 1142 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 KLK14Q9P0G3 267 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 BCS1LQ9Y276 419 aa7.34□□□□□ -1.23
SMC4-225ENST00000497203 DGKZQ13574 1117 aa7.33□□□□□ -1.24
SMC4-225ENST00000497203 RETREG2Q8NC44 543 aa7.33□□□□□ -1.24
SMC4-225ENST00000497203 MYO19Q96H55 970 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms