RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 HLFQ16534 295 aa16.29■□□□□ 0.2
CLDN12-213ENST00000496677 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
CLDN12-213ENST00000496677 CHL1O00533 1208 aa16.28■□□□□ 0.2
CLDN12-213ENST00000496677 PDE6BP35913 854 aa16.28■□□□□ 0.2
CLDN12-213ENST00000496677 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
CLDN12-213ENST00000496677 LMOD3Q0VAK6 560 aa16.28■□□□□ 0.2
CLDN12-213ENST00000496677 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
CLDN12-213ENST00000496677 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
CLDN12-213ENST00000496677 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
CLDN12-213ENST00000496677 TSPYL4Q9UJ04 414 aa16.28■□□□□ 0.2
CLDN12-213ENST00000496677 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
CLDN12-213ENST00000496677 KLRG2A4D1S0 409 aaPredicted RBP16.27■□□□□ 0.2
CLDN12-213ENST00000496677 ERVV-1B6SEH8 477 aa16.27■□□□□ 0.2
CLDN12-213ENST00000496677 PRELPP51888 382 aa16.27■□□□□ 0.2
CLDN12-213ENST00000496677 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLDN12-213ENST00000496677 PDIA6Q15084 440 aa16.27■□□□□ 0.2
CLDN12-213ENST00000496677 TTLL7Q6ZT98 887 aa16.27■□□□□ 0.2
CLDN12-213ENST00000496677 CNBD1Q8NA66 436 aa16.27■□□□□ 0.2
CLDN12-213ENST00000496677 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
CLDN12-213ENST00000496677 KIF3CO14782 793 aa16.26■□□□□ 0.19
CLDN12-213ENST00000496677 SBF1O95248 1867 aa16.26■□□□□ 0.19
CLDN12-213ENST00000496677 SRGNP10124 158 aa16.25■□□□□ 0.19
CLDN12-213ENST00000496677 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
CLDN12-213ENST00000496677 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
CLDN12-213ENST00000496677 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLDN12-213ENST00000496677 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
CLDN12-213ENST00000496677 MAP3K15Q6ZN16 1313 aa16.24■□□□□ 0.19
CLDN12-213ENST00000496677 ST5P78524 1137 aa16.24■□□□□ 0.19
CLDN12-213ENST00000496677 STYK1Q6J9G0 422 aa16.24■□□□□ 0.19
CLDN12-213ENST00000496677 TPTE2Q6XPS3 522 aa16.24■□□□□ 0.19
CLDN12-213ENST00000496677 NGEFQ8N5V2 710 aa16.24■□□□□ 0.19
CLDN12-213ENST00000496677 NFKBIEO00221 500 aa16.23■□□□□ 0.19
CLDN12-213ENST00000496677 MYL6BP14649 208 aa16.23■□□□□ 0.19
CLDN12-213ENST00000496677 RASSF7Q02833 373 aa16.23■□□□□ 0.19
CLDN12-213ENST00000496677 ZNF622Q969S3 477 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLDN12-213ENST00000496677 RNF181Q9P0P0 153 aa16.23■□□□□ 0.19
CLDN12-213ENST00000496677 PROSER3Q2NL68 480 aa16.22■□□□□ 0.19
CLDN12-213ENST00000496677 CCDC184Q52MB2 194 aa16.22■□□□□ 0.19
CLDN12-213ENST00000496677 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
CLDN12-213ENST00000496677 C7orf43Q8WVR3 580 aa16.22■□□□□ 0.19
CLDN12-213ENST00000496677 MASTLQ96GX5 879 aa16.22■□□□□ 0.19
CLDN12-213ENST00000496677 NUP98P52948 1817 aa16.22■□□□□ 0.19
CLDN12-213ENST00000496677 C21orf2O43822 256 aa16.21■□□□□ 0.19
CLDN12-213ENST00000496677 KRT24Q2M2I5 525 aa16.21■□□□□ 0.19
CLDN12-213ENST00000496677 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
CLDN12-213ENST00000496677 SLX4Q8IY92 1834 aa16.21■□□□□ 0.19
CLDN12-213ENST00000496677 ZNF853P0CG23 659 aa16.2■□□□□ 0.18
CLDN12-213ENST00000496677 EIF2S2P20042 333 aaKnown RBP16.2■□□□□ 0.18
CLDN12-213ENST00000496677 LMNB1P20700 586 aa16.2■□□□□ 0.18
CLDN12-213ENST00000496677 GIGYF2Q6Y7W6 1299 aaKnown RBP16.2■□□□□ 0.18
CLDN12-213ENST00000496677 KIF6Q6ZMV9 814 aa16.2■□□□□ 0.18
CLDN12-213ENST00000496677 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
CLDN12-213ENST00000496677 NMRK2Q9NPI5 230 aa16.2■□□□□ 0.18
CLDN12-213ENST00000496677 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
CLDN12-213ENST00000496677 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
CLDN12-213ENST00000496677 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
CLDN12-213ENST00000496677 APAF1O14727 1248 aa16.19■□□□□ 0.18
CLDN12-213ENST00000496677 NPHP1O15259 732 aa16.19■□□□□ 0.18
CLDN12-213ENST00000496677 ANXA1P04083 346 aa16.19■□□□□ 0.18
CLDN12-213ENST00000496677 NPR1P16066 1061 aa16.19■□□□□ 0.18
CLDN12-213ENST00000496677 PRPF40BQ6NWY9 871 aaKnown RBP16.19■□□□□ 0.18
CLDN12-213ENST00000496677 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
CLDN12-213ENST00000496677 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
CLDN12-213ENST00000496677 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
CLDN12-213ENST00000496677 CRY2Q49AN0 593 aa16.18■□□□□ 0.18
CLDN12-213ENST00000496677 SUSD4Q5VX71 490 aa16.18■□□□□ 0.18
CLDN12-213ENST00000496677 FER1L6Q2WGJ9 1857 aa16.18■□□□□ 0.18
CLDN12-213ENST00000496677 LTBP3Q9NS15 1303 aa16.18■□□□□ 0.18
CLDN12-213ENST00000496677 ABCC12Q96J65 1359 aa16.17■□□□□ 0.18
CLDN12-213ENST00000496677 IBTKQ9P2D0 1353 aaPredicted RBP16.17■□□□□ 0.18
CLDN12-213ENST00000496677 HOXB7P09629 217 aa16.17■□□□□ 0.18
CLDN12-213ENST00000496677 ERFEQ4G0M1 354 aa16.17■□□□□ 0.18
CLDN12-213ENST00000496677 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
CLDN12-213ENST00000496677 NYXQ9GZU5 481 aa16.17■□□□□ 0.18
CLDN12-213ENST00000496677 DDX21Q9NR30 783 aaKnown RBP eCLIP16.17■□□□□ 0.18
CLDN12-213ENST00000496677 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
CLDN12-213ENST00000496677 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
CLDN12-213ENST00000496677 ARFGEF2Q9Y6D5 1785 aa16.17■□□□□ 0.18
CLDN12-213ENST00000496677 NTSR2O95665 410 aa16.16■□□□□ 0.18
CLDN12-213ENST00000496677 GPTP24298 496 aa16.16■□□□□ 0.18
CLDN12-213ENST00000496677 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
CLDN12-213ENST00000496677 NECTIN2Q92692 538 aa16.16■□□□□ 0.18
CLDN12-213ENST00000496677 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
CLDN12-213ENST00000496677 RIC1Q4ADV7 1423 aa16.16■□□□□ 0.18
CLDN12-213ENST00000496677 KDM2BQ8NHM5 1336 aa16.16■□□□□ 0.18
CLDN12-213ENST00000496677 TOMM70O94826 608 aa16.15■□□□□ 0.18
CLDN12-213ENST00000496677 CCDC88AQ3V6T2 1871 aa16.15■□□□□ 0.18
CLDN12-213ENST00000496677 XAGE3Q8WTP9 111 aa16.15■□□□□ 0.18
CLDN12-213ENST00000496677 TNRC6CQ9HCJ0 1690 aaKnown RBP16.14■□□□□ 0.18
CLDN12-213ENST00000496677 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
CLDN12-213ENST00000496677 GTF2E1P29083 439 aaPredicted RBP16.14■□□□□ 0.17
CLDN12-213ENST00000496677 HOXA10P31260 410 aaPredicted RBP16.14■□□□□ 0.17
CLDN12-213ENST00000496677 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
CLDN12-213ENST00000496677 SLC10A5Q5PT55 438 aa16.14■□□□□ 0.17
CLDN12-213ENST00000496677 SOGA3Q5TF21 947 aa16.14■□□□□ 0.17
CLDN12-213ENST00000496677 RRAGCQ9HB90 399 aa16.14■□□□□ 0.17
CLDN12-213ENST00000496677 IFT57Q9NWB7 429 aa16.14■□□□□ 0.17
CLDN12-213ENST00000496677 HSPA6P17066 643 aa16.13■□□□□ 0.17
CLDN12-213ENST00000496677 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
CLDN12-213ENST00000496677 OLFM4Q6UX06 510 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms