RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 CALD1Q05682 793 aaKnown RBP21.02■□□□□ 0.96
DNMT3A-215ENST00000496570 NGEFQ8N5V2 710 aa21.02■□□□□ 0.96
DNMT3A-215ENST00000496570 WWC3Q9ULE0 1092 aa21.02■□□□□ 0.96
DNMT3A-215ENST00000496570 ANKRD31Q8N7Z5 1873 aa21.02■□□□□ 0.96
DNMT3A-215ENST00000496570 HOXB7P09629 217 aa21.01■□□□□ 0.95
DNMT3A-215ENST00000496570 NECTIN2Q92692 538 aa21.01■□□□□ 0.95
DNMT3A-215ENST00000496570 NUP98P52948 1817 aa21.01■□□□□ 0.95
DNMT3A-215ENST00000496570 DUSP27Q5VZP5 1158 aa21■□□□□ 0.95
DNMT3A-215ENST00000496570 PRR5LQ6MZQ0 368 aa21■□□□□ 0.95
DNMT3A-215ENST00000496570 MAP3K15Q6ZN16 1313 aa21■□□□□ 0.95
DNMT3A-215ENST00000496570 ERVV-1B6SEH8 477 aa20.99■□□□□ 0.95
DNMT3A-215ENST00000496570 CHRNA5P30532 468 aa20.99■□□□□ 0.95
DNMT3A-215ENST00000496570 SETDB2Q96T68 719 aa20.99■□□□□ 0.95
DNMT3A-215ENST00000496570 DLEC1Q9Y238 1755 aa20.99■□□□□ 0.95
DNMT3A-215ENST00000496570 C8orf58Q8NAV2 365 aa20.98■□□□□ 0.95
DNMT3A-215ENST00000496570 CHD4Q14839 1912 aa20.98■□□□□ 0.95
DNMT3A-215ENST00000496570 ATP10DQ9P241 1426 aa20.97■□□□□ 0.95
DNMT3A-215ENST00000496570 CCDC24Q8N4L8 307 aa20.97■□□□□ 0.95
DNMT3A-215ENST00000496570 TSR2Q969E8 191 aaKnown RBP20.97■□□□□ 0.95
DNMT3A-215ENST00000496570 DDX21Q9NR30 783 aaKnown RBP eCLIP20.97■□□□□ 0.95
DNMT3A-215ENST00000496570 CHPF2Q9P2E5 772 aa20.97■□□□□ 0.95
DNMT3A-215ENST00000496570 ZNF652Q9Y2D9 606 aa20.97■□□□□ 0.95
DNMT3A-215ENST00000496570 IL16Q14005 1332 aa20.97■□□□□ 0.95
DNMT3A-215ENST00000496570 COL11A2P13942 1736 aaPredicted RBP20.96■□□□□ 0.95
DNMT3A-215ENST00000496570 GRIN3BO60391 1043 aa20.96■□□□□ 0.95
DNMT3A-215ENST00000496570 HDGFL1Q5TGJ6 251 aa20.96■□□□□ 0.95
DNMT3A-215ENST00000496570 ZBTB3Q9H5J0 574 aa20.96■□□□□ 0.95
DNMT3A-215ENST00000496570 SALL2Q9Y467 1007 aaPredicted RBP20.96■□□□□ 0.95
DNMT3A-215ENST00000496570 KIF6Q6ZMV9 814 aa20.95■□□□□ 0.94
DNMT3A-215ENST00000496570 TSPYL6Q8N831 410 aa20.95■□□□□ 0.94
DNMT3A-215ENST00000496570 NIP7Q9Y221 180 aaKnown RBP eCLIP20.95■□□□□ 0.94
DNMT3A-215ENST00000496570 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
DNMT3A-215ENST00000496570 YY1P25490 414 aa20.94■□□□□ 0.94
DNMT3A-215ENST00000496570 COPS6Q7L5N1 327 aa20.94■□□□□ 0.94
DNMT3A-215ENST00000496570 XAGE3Q8WTP9 111 aa20.94■□□□□ 0.94
DNMT3A-215ENST00000496570 UBN2Q6ZU65 1347 aa20.94■□□□□ 0.94
DNMT3A-215ENST00000496570 ARFGEF1Q9Y6D6 1849 aa20.94■□□□□ 0.94
DNMT3A-215ENST00000496570 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
DNMT3A-215ENST00000496570 GIGYF2Q6Y7W6 1299 aaKnown RBP20.93■□□□□ 0.94
DNMT3A-215ENST00000496570 WDR63Q8IWG1 891 aa20.93■□□□□ 0.94
DNMT3A-215ENST00000496570 ZNF34Q8IZ26 560 aa20.93■□□□□ 0.94
DNMT3A-215ENST00000496570 CNBD1Q8NA66 436 aa20.93■□□□□ 0.94
DNMT3A-215ENST00000496570 BRIP1Q9BX63 1249 aa20.93■□□□□ 0.94
DNMT3A-215ENST00000496570 SPINK5Q9NQ38 1064 aaPredicted RBP20.93■□□□□ 0.94
DNMT3A-215ENST00000496570 PIM2Q9P1W9 311 aa20.93■□□□□ 0.94
DNMT3A-215ENST00000496570 NBPF5PQ86XG9 351 aaPredicted RBP20.92■□□□□ 0.94
DNMT3A-215ENST00000496570 DBF4Q9UBU7 674 aaPredicted RBP20.92■□□□□ 0.94
DNMT3A-215ENST00000496570 BCS1LQ9Y276 419 aa20.92■□□□□ 0.94
DNMT3A-215ENST00000496570 ZNF521Q96K83 1311 aa20.92■□□□□ 0.94
DNMT3A-215ENST00000496570 FANCIQ9NVI1 1328 aa20.91■□□□□ 0.94
DNMT3A-215ENST00000496570 ANKRD36CQ5JPF3 1778 aa20.9■□□□□ 0.94
DNMT3A-215ENST00000496570 AIMP1Q12904 312 aaKnown RBP20.9■□□□□ 0.94
DNMT3A-215ENST00000496570 C2CD5Q86YS7 1000 aa20.9■□□□□ 0.94
DNMT3A-215ENST00000496570 TNRC6CQ9HCJ0 1690 aaKnown RBP20.89■□□□□ 0.94
DNMT3A-215ENST00000496570 GPTP24298 496 aa20.89■□□□□ 0.93
DNMT3A-215ENST00000496570 DALRD3Q5D0E6 543 aaKnown RBP20.89■□□□□ 0.93
DNMT3A-215ENST00000496570 SUSD4Q5VX71 490 aa20.89■□□□□ 0.93
DNMT3A-215ENST00000496570 ABCC12Q96J65 1359 aa20.88■□□□□ 0.93
DNMT3A-215ENST00000496570 IBTKQ9P2D0 1353 aaPredicted RBP20.88■□□□□ 0.93
DNMT3A-215ENST00000496570 KLRG2A4D1S0 409 aaPredicted RBP20.88■□□□□ 0.93
DNMT3A-215ENST00000496570 FAM177BA6PVY3 158 aa20.88■□□□□ 0.93
DNMT3A-215ENST00000496570 PDE6BP35913 854 aa20.88■□□□□ 0.93
DNMT3A-215ENST00000496570 ST5P78524 1137 aa20.88■□□□□ 0.93
DNMT3A-215ENST00000496570 TPTE2Q6XPS3 522 aa20.88■□□□□ 0.93
DNMT3A-215ENST00000496570 H0YIN7 160 aa20.87■□□□□ 0.93
DNMT3A-215ENST00000496570 DIEXFQ68CQ4 756 aaKnown RBP20.87■□□□□ 0.93
DNMT3A-215ENST00000496570 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
DNMT3A-215ENST00000496570 HYPKQ9NX55 129 aa20.87■□□□□ 0.93
DNMT3A-215ENST00000496570 NTSR2O95665 410 aa20.86■□□□□ 0.93
DNMT3A-215ENST00000496570 SRGNP10124 158 aa20.86■□□□□ 0.93
DNMT3A-215ENST00000496570 NUTM1Q86Y26 1132 aa20.86■□□□□ 0.93
DNMT3A-215ENST00000496570 PLBD2Q8NHP8 589 aa20.86■□□□□ 0.93
DNMT3A-215ENST00000496570 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
DNMT3A-215ENST00000496570 TWISTNBQ3B726 338 aaPredicted RBP20.85■□□□□ 0.93
DNMT3A-215ENST00000496570 ERFEQ4G0M1 354 aa20.85■□□□□ 0.93
DNMT3A-215ENST00000496570 MIER1Q8N108 512 aa20.85■□□□□ 0.93
DNMT3A-215ENST00000496570 PDZRN3Q9UPQ7 1066 aa20.85■□□□□ 0.93
DNMT3A-215ENST00000496570 ADCY9O60503 1353 aa20.85■□□□□ 0.93
DNMT3A-215ENST00000496570 NPHP1O15259 732 aa20.84■□□□□ 0.93
DNMT3A-215ENST00000496570 TCIRG1Q13488 830 aa20.84■□□□□ 0.93
DNMT3A-215ENST00000496570 ANKRD13DQ6ZTN6 518 aa20.84■□□□□ 0.93
DNMT3A-215ENST00000496570 TTLL6Q8N841 843 aa20.84■□□□□ 0.93
DNMT3A-215ENST00000496570 RIC1Q4ADV7 1423 aa20.84■□□□□ 0.93
DNMT3A-215ENST00000496570 PARP10Q53GL7 1025 aa20.83■□□□□ 0.93
DNMT3A-215ENST00000496570 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
DNMT3A-215ENST00000496570 NYXQ9GZU5 481 aa20.83■□□□□ 0.93
DNMT3A-215ENST00000496570 SLX4Q8IY92 1834 aa20.83■□□□□ 0.92
DNMT3A-215ENST00000496570 EXOSC9Q06265 439 aaKnown RBP20.82■□□□□ 0.92
DNMT3A-215ENST00000496570 STYK1Q6J9G0 422 aa20.82■□□□□ 0.92
DNMT3A-215ENST00000496570 ARHGAP27Q6ZUM4 889 aa20.82■□□□□ 0.92
DNMT3A-215ENST00000496570 NLRP10Q86W26 655 aa20.82■□□□□ 0.92
DNMT3A-215ENST00000496570 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
DNMT3A-215ENST00000496570 ZNF622Q969S3 477 aaKnown RBP eCLIP20.82■□□□□ 0.92
DNMT3A-215ENST00000496570 TCERG1O14776 1098 aaKnown RBP20.81■□□□□ 0.92
DNMT3A-215ENST00000496570 VAMP4O75379 141 aa20.81■□□□□ 0.92
DNMT3A-215ENST00000496570 CRY2Q49AN0 593 aa20.81■□□□□ 0.92
DNMT3A-215ENST00000496570 HSP90AB3PQ58FF7 597 aa20.81■□□□□ 0.92
DNMT3A-215ENST00000496570 MASTLQ96GX5 879 aa20.81■□□□□ 0.92
DNMT3A-215ENST00000496570 ISCA1Q9BUE6 129 aa20.81■□□□□ 0.92
DNMT3A-215ENST00000496570 CACNA1SQ13698 1873 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms