RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 PDIA6Q15084 440 aa23.36■■□□□ 1.33
NPDC1-206ENST00000496498 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
NPDC1-206ENST00000496498 BICDL1Q6ZP65 573 aa23.35■■□□□ 1.33
NPDC1-206ENST00000496498 LRP10Q7Z4F1 713 aa23.35■■□□□ 1.33
NPDC1-206ENST00000496498 DBF4Q9UBU7 674 aaPredicted RBP23.35■■□□□ 1.33
NPDC1-206ENST00000496498 ATP10DQ9P241 1426 aa23.34■■□□□ 1.33
NPDC1-206ENST00000496498 GRIN3BO60391 1043 aa23.34■■□□□ 1.33
NPDC1-206ENST00000496498 PDZRN3Q9UPQ7 1066 aa23.34■■□□□ 1.33
NPDC1-206ENST00000496498 BRCA1P38398 1863 aaKnown RBP23.34■■□□□ 1.33
NPDC1-206ENST00000496498 TTLL7Q6ZT98 887 aa23.32■■□□□ 1.32
NPDC1-206ENST00000496498 HYPKQ9NX55 129 aa23.32■■□□□ 1.32
NPDC1-206ENST00000496498 CHPF2Q9P2E5 772 aa23.32■■□□□ 1.32
NPDC1-206ENST00000496498 NIP7Q9Y221 180 aaKnown RBP eCLIP23.32■■□□□ 1.32
NPDC1-206ENST00000496498 DLEC1Q9Y238 1755 aa23.32■■□□□ 1.32
NPDC1-206ENST00000496498 PROSER3Q2NL68 480 aa23.31■■□□□ 1.32
NPDC1-206ENST00000496498 GIGYF2Q6Y7W6 1299 aaKnown RBP23.31■■□□□ 1.32
NPDC1-206ENST00000496498 PELP1Q8IZL8 1130 aaKnown RBP23.31■■□□□ 1.32
NPDC1-206ENST00000496498 CNBD1Q8NA66 436 aa23.31■■□□□ 1.32
NPDC1-206ENST00000496498 NECTIN2Q92692 538 aa23.31■■□□□ 1.32
NPDC1-206ENST00000496498 CHD4Q14839 1912 aa23.3■■□□□ 1.32
NPDC1-206ENST00000496498 NPHP1O15259 732 aa23.3■■□□□ 1.32
NPDC1-206ENST00000496498 ST5P78524 1137 aa23.3■■□□□ 1.32
NPDC1-206ENST00000496498 HLFQ16534 295 aa23.3■■□□□ 1.32
NPDC1-206ENST00000496498 TSR2Q969E8 191 aaKnown RBP23.3■■□□□ 1.32
NPDC1-206ENST00000496498 SALL2Q9Y467 1007 aaPredicted RBP23.3■■□□□ 1.32
NPDC1-206ENST00000496498 ANKRD36CQ5JPF3 1778 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 IBTKQ9P2D0 1353 aaPredicted RBP23.29■■□□□ 1.32
NPDC1-206ENST00000496498 SENP3-EIF4A1A0A087X0R7 540 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 DPEP1P16444 411 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 HSP90AB3PQ58FF7 597 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 CCDC30Q5VVM6 783 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 PRR5LQ6MZQ0 368 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 NBPF5PQ86XG9 351 aaPredicted RBP23.29■■□□□ 1.32
NPDC1-206ENST00000496498 C8orf58Q8NAV2 365 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 BRIP1Q9BX63 1249 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 ZBTB3Q9H5J0 574 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 MYH16Q9H6N6 1097 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 FANCIQ9NVI1 1328 aa23.29■■□□□ 1.32
NPDC1-206ENST00000496498 ANKRD31Q8N7Z5 1873 aa23.28■■□□□ 1.32
NPDC1-206ENST00000496498 A0A0G2JLW4 131 aa23.28■■□□□ 1.32
NPDC1-206ENST00000496498 ANXA1P04083 346 aa23.28■■□□□ 1.32
NPDC1-206ENST00000496498 PDE6BP35913 854 aa23.28■■□□□ 1.32
NPDC1-206ENST00000496498 TPTE2Q6XPS3 522 aa23.28■■□□□ 1.32
NPDC1-206ENST00000496498 COPS6Q7L5N1 327 aa23.28■■□□□ 1.32
NPDC1-206ENST00000496498 XAGE3Q8WTP9 111 aa23.28■■□□□ 1.32
NPDC1-206ENST00000496498 NYXQ9GZU5 481 aa23.28■■□□□ 1.32
NPDC1-206ENST00000496498 ARFGEF1Q9Y6D6 1849 aa23.27■■□□□ 1.32
NPDC1-206ENST00000496498 YBX3P16989 372 aaKnown RBP eCLIP23.27■■□□□ 1.32
NPDC1-206ENST00000496498 GOLGA2Q08379 1002 aa23.27■■□□□ 1.32
NPDC1-206ENST00000496498 PIM2Q9P1W9 311 aa23.27■■□□□ 1.32
NPDC1-206ENST00000496498 ZNF521Q96K83 1311 aa23.27■■□□□ 1.32
NPDC1-206ENST00000496498 ELL2O00472 640 aaPredicted RBP23.26■■□□□ 1.31
NPDC1-206ENST00000496498 TWISTNBQ3B726 338 aaPredicted RBP23.26■■□□□ 1.31
NPDC1-206ENST00000496498 PARP10Q53GL7 1025 aa23.26■■□□□ 1.31
NPDC1-206ENST00000496498 KCNA3P22001 575 aa23.25■■□□□ 1.31
NPDC1-206ENST00000496498 ZNF34Q8IZ26 560 aa23.25■■□□□ 1.31
NPDC1-206ENST00000496498 CACNA1FO60840 1977 aa23.24■■□□□ 1.31
NPDC1-206ENST00000496498 H0YIN7 160 aa23.24■■□□□ 1.31
NPDC1-206ENST00000496498 AIMP1Q12904 312 aaKnown RBP23.24■■□□□ 1.31
NPDC1-206ENST00000496498 TSPYL6Q8N831 410 aa23.24■■□□□ 1.31
NPDC1-206ENST00000496498 PLBD2Q8NHP8 589 aa23.24■■□□□ 1.31
NPDC1-206ENST00000496498 STK31Q9BXU1 1019 aa23.24■■□□□ 1.31
NPDC1-206ENST00000496498 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
NPDC1-206ENST00000496498 MIER1Q8N108 512 aa23.23■■□□□ 1.31
NPDC1-206ENST00000496498 RNF123Q5XPI4 1314 aa23.23■■□□□ 1.31
NPDC1-206ENST00000496498 RIC1Q4ADV7 1423 aa23.23■■□□□ 1.31
NPDC1-206ENST00000496498 CHRNA5P30532 468 aa23.22■■□□□ 1.31
NPDC1-206ENST00000496498 DALRD3Q5D0E6 543 aaKnown RBP23.22■■□□□ 1.31
NPDC1-206ENST00000496498 ANKRD13DQ6ZTN6 518 aa23.22■■□□□ 1.31
NPDC1-206ENST00000496498 C2CD5Q86YS7 1000 aa23.22■■□□□ 1.31
NPDC1-206ENST00000496498 ARFGEF2Q9Y6D5 1785 aa23.22■■□□□ 1.31
NPDC1-206ENST00000496498 GTF2E1P29083 439 aaPredicted RBP23.21■■□□□ 1.31
NPDC1-206ENST00000496498 BCS1LQ9Y276 419 aa23.21■■□□□ 1.31
NPDC1-206ENST00000496498 UBN2Q6ZU65 1347 aa23.21■■□□□ 1.31
NPDC1-206ENST00000496498 COL11A2P13942 1736 aaPredicted RBP23.21■■□□□ 1.31
NPDC1-206ENST00000496498 DDX58O95786 925 aaKnown RBP23.2■■□□□ 1.3
NPDC1-206ENST00000496498 TCIRG1Q13488 830 aa23.2■■□□□ 1.3
NPDC1-206ENST00000496498 GPTP24298 496 aa23.19■■□□□ 1.3
NPDC1-206ENST00000496498 KLRG2A4D1S0 409 aaPredicted RBP23.18■■□□□ 1.3
NPDC1-206ENST00000496498 E9PSI1 815 aa23.18■■□□□ 1.3
NPDC1-206ENST00000496498 YY1P25490 414 aa23.18■■□□□ 1.3
NPDC1-206ENST00000496498 STYK1Q6J9G0 422 aa23.18■■□□□ 1.3
NPDC1-206ENST00000496498 TTLL6Q8N841 843 aa23.18■■□□□ 1.3
NPDC1-206ENST00000496498 SPINK5Q9NQ38 1064 aaPredicted RBP23.18■■□□□ 1.3
NPDC1-206ENST00000496498 NTSR2O95665 410 aa23.17■■□□□ 1.3
NPDC1-206ENST00000496498 EXOSC9Q06265 439 aaKnown RBP23.17■■□□□ 1.3
NPDC1-206ENST00000496498 SUSD4Q5VX71 490 aa23.17■■□□□ 1.3
NPDC1-206ENST00000496498 WWC3Q9ULE0 1092 aa23.17■■□□□ 1.3
NPDC1-206ENST00000496498 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
NPDC1-206ENST00000496498 VAMP4O75379 141 aa23.16■■□□□ 1.3
NPDC1-206ENST00000496498 SRGNP10124 158 aa23.16■■□□□ 1.3
NPDC1-206ENST00000496498 RIC3Q7Z5B4 369 aa23.16■■□□□ 1.3
NPDC1-206ENST00000496498 CNKSR1Q969H4 720 aa23.16■■□□□ 1.3
NPDC1-206ENST00000496498 MASTLQ96GX5 879 aa23.16■■□□□ 1.3
NPDC1-206ENST00000496498 UTP14AQ9BVJ6 771 aaKnown RBP23.16■■□□□ 1.3
NPDC1-206ENST00000496498 PHAXQ9H814 394 aaKnown RBP23.16■■□□□ 1.3
NPDC1-206ENST00000496498 NLRP10Q86W26 655 aa23.15■■□□□ 1.3
NPDC1-206ENST00000496498 CCDC24Q8N4L8 307 aa23.15■■□□□ 1.3
NPDC1-206ENST00000496498 NPR1P16066 1061 aa23.14■■□□□ 1.29
NPDC1-206ENST00000496498 TRIM28Q13263 835 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms