RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
ACTN4-207ENST00000495553 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
ACTN4-207ENST00000495553 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
ACTN4-207ENST00000495553 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
ACTN4-207ENST00000495553 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
ACTN4-207ENST00000495553 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
ACTN4-207ENST00000495553 DDX21Q9NR30 783 aaKnown RBP eCLIP12.07□□□□□ -0.48
ACTN4-207ENST00000495553 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
ACTN4-207ENST00000495553 PTPRCP08575 1304 aa12.07□□□□□ -0.48
ACTN4-207ENST00000495553 BCAR3O75815 825 aa12.06□□□□□ -0.48
ACTN4-207ENST00000495553 CAMTA2O94983 1202 aa12.06□□□□□ -0.48
ACTN4-207ENST00000495553 RRP1P56182 461 aaKnown RBP12.06□□□□□ -0.48
ACTN4-207ENST00000495553 ZKSCAN2Q63HK3 967 aa12.06□□□□□ -0.48
ACTN4-207ENST00000495553 FTSJ3Q8IY81 847 aaKnown RBP12.06□□□□□ -0.48
ACTN4-207ENST00000495553 ARHGAP45Q92619 1136 aa12.06□□□□□ -0.48
ACTN4-207ENST00000495553 API5Q9BZZ5 524 aaKnown RBP12.06□□□□□ -0.48
ACTN4-207ENST00000495553 FHDC1Q9C0D6 1143 aaPredicted RBP12.06□□□□□ -0.48
ACTN4-207ENST00000495553 CHPF2Q9P2E5 772 aa12.06□□□□□ -0.48
ACTN4-207ENST00000495553 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
ACTN4-207ENST00000495553 QSER1Q2KHR3 1735 aa12.06□□□□□ -0.48
ACTN4-207ENST00000495553 CACNA1FO60840 1977 aa12.05□□□□□ -0.48
ACTN4-207ENST00000495553 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
ACTN4-207ENST00000495553 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
ACTN4-207ENST00000495553 ANXA1P04083 346 aa12.05□□□□□ -0.48
ACTN4-207ENST00000495553 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
ACTN4-207ENST00000495553 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
ACTN4-207ENST00000495553 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
ACTN4-207ENST00000495553 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
ACTN4-207ENST00000495553 LRP5O75197 1615 aa12.04□□□□□ -0.48
ACTN4-207ENST00000495553 AIMP1Q12904 312 aaKnown RBP12.04□□□□□ -0.48
ACTN4-207ENST00000495553 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
ACTN4-207ENST00000495553 NFIXQ14938 502 aa12.04□□□□□ -0.48
ACTN4-207ENST00000495553 PDIA6Q15084 440 aa12.04□□□□□ -0.48
ACTN4-207ENST00000495553 PROSER3Q2NL68 480 aa12.04□□□□□ -0.48
ACTN4-207ENST00000495553 CLEC4GQ6UXB4 293 aa12.04□□□□□ -0.48
ACTN4-207ENST00000495553 TTLL7Q6ZT98 887 aa12.04□□□□□ -0.48
ACTN4-207ENST00000495553 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
ACTN4-207ENST00000495553 NOB1Q9ULX3 412 aaKnown RBP12.04□□□□□ -0.48
ACTN4-207ENST00000495553 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
ACTN4-207ENST00000495553 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 NPHP1O15259 732 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 TM4SF1P30408 202 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 FLIIQ13045 1269 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 PDE3AQ14432 1141 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 TBC1D9BQ66K14 1250 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 ATF7IPQ6VMQ6 1270 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 COPS6Q7L5N1 327 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 SYT17Q9BSW7 474 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 CHMP4BQ9H444 224 aaKnown RBP12.03□□□□□ -0.48
ACTN4-207ENST00000495553 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 MAP3K15Q6ZN16 1313 aa12.03□□□□□ -0.48
ACTN4-207ENST00000495553 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
ACTN4-207ENST00000495553 RGL2O15211 777 aa12.02□□□□□ -0.49
ACTN4-207ENST00000495553 DDR1Q08345 913 aa12.02□□□□□ -0.49
ACTN4-207ENST00000495553 DZIP1LQ8IYY4 767 aaKnown RBP12.02□□□□□ -0.49
ACTN4-207ENST00000495553 DCAF8L1A6NGE4 600 aa12.01□□□□□ -0.49
ACTN4-207ENST00000495553 SERPINB2P05120 415 aa12.01□□□□□ -0.49
ACTN4-207ENST00000495553 HLFQ16534 295 aa12.01□□□□□ -0.49
ACTN4-207ENST00000495553 LRP10Q7Z4F1 713 aa12.01□□□□□ -0.49
ACTN4-207ENST00000495553 NIP7Q9Y221 180 aaKnown RBP eCLIP12.01□□□□□ -0.49
ACTN4-207ENST00000495553 RNF123Q5XPI4 1314 aa12.01□□□□□ -0.49
ACTN4-207ENST00000495553 PLIN1O60240 522 aa12□□□□□ -0.49
ACTN4-207ENST00000495553 NEXNQ0ZGT2 675 aa12□□□□□ -0.49
ACTN4-207ENST00000495553 RIC3Q7Z5B4 369 aa12□□□□□ -0.49
ACTN4-207ENST00000495553 CARMIL3Q8ND23 1372 aa12□□□□□ -0.49
ACTN4-207ENST00000495553 TRIM27P14373 513 aa11.99□□□□□ -0.49
ACTN4-207ENST00000495553 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
ACTN4-207ENST00000495553 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
ACTN4-207ENST00000495553 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
ACTN4-207ENST00000495553 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
ACTN4-207ENST00000495553 NBPF5PQ86XG9 351 aaPredicted RBP11.99□□□□□ -0.49
ACTN4-207ENST00000495553 CNBD1Q8NA66 436 aa11.99□□□□□ -0.49
ACTN4-207ENST00000495553 FAM177BA6PVY3 158 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 GPTP24298 496 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 GTF2E1P29083 439 aaPredicted RBP11.98□□□□□ -0.49
ACTN4-207ENST00000495553 TGFB2P61812 414 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 ST5P78524 1137 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 SLC4A10Q6U841 1118 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 KSR2Q6VAB6 950 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 TPTE2Q6XPS3 522 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 PLBD2Q8NHP8 589 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 CLUAP1Q96AJ1 413 aa11.98□□□□□ -0.49
ACTN4-207ENST00000495553 PHAXQ9H814 394 aaKnown RBP11.98□□□□□ -0.49
ACTN4-207ENST00000495553 GOLGB1Q14789 3259 aaKnown RBP11.98□□□□□ -0.49
ACTN4-207ENST00000495553 PI4KAP2A4QPH2 592 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 AAMPQ13685 434 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 ERICH6BQ5W0A0 696 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 G2E3Q7L622 706 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
ACTN4-207ENST00000495553 PI4KAP1Q8N8J0 262 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 DNAAF4Q8WXU2 420 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 NYXQ9GZU5 481 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 DDX19BQ9UMR2 479 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 HDAC5Q9UQL6 1122 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
ACTN4-207ENST00000495553 ABCC4O15439 1325 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms