RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 RTCBQ9Y3I0 505 aaKnown RBP20.54■□□□□ 0.88
CBX4-204ENST00000495122 TMEM57Q8N5G2 664 aa20.53■□□□□ 0.88
CBX4-204ENST00000495122 ZBTB40Q9NUA8 1239 aa20.53■□□□□ 0.88
CBX4-204ENST00000495122 TNNQ9UQP3 1299 aa20.53■□□□□ 0.88
CBX4-204ENST00000495122 DLEC1Q9Y238 1755 aa20.52■□□□□ 0.88
CBX4-204ENST00000495122 ADRA2BP18089 450 aa20.52■□□□□ 0.88
CBX4-204ENST00000495122 BACH2Q9BYV9 841 aa20.52■□□□□ 0.88
CBX4-204ENST00000495122 SLC52A2Q9HAB3 445 aa20.52■□□□□ 0.88
CBX4-204ENST00000495122 NRXN2Q9P2S2 1712 aa20.52■□□□□ 0.88
CBX4-204ENST00000495122 PTCD1O75127 700 aaKnown RBP20.51■□□□□ 0.87
CBX4-204ENST00000495122 RPS6KA4O75676 772 aa20.51■□□□□ 0.87
CBX4-204ENST00000495122 IGHDP01880 384 aa20.51■□□□□ 0.87
CBX4-204ENST00000495122 TAF7Q15545 349 aaPredicted RBP20.51■□□□□ 0.87
CBX4-204ENST00000495122 LGR6Q9HBX8 967 aa20.51■□□□□ 0.87
CBX4-204ENST00000495122 PCDHB15Q9Y5E8 787 aa20.51■□□□□ 0.87
CBX4-204ENST00000495122 SCN7AQ01118 1682 aa20.51■□□□□ 0.87
CBX4-204ENST00000495122 RNMTO43148 476 aaKnown RBP20.5■□□□□ 0.87
CBX4-204ENST00000495122 PDE4AP27815 886 aa20.5■□□□□ 0.87
CBX4-204ENST00000495122 TRAPPC3LQ5T215 181 aa20.5■□□□□ 0.87
CBX4-204ENST00000495122 C10orf71Q711Q0 1435 aa20.5■□□□□ 0.87
CBX4-204ENST00000495122 HOXB7P09629 217 aa20.49■□□□□ 0.87
CBX4-204ENST00000495122 ARHGEF1Q92888 912 aaKnown RBP20.49■□□□□ 0.87
CBX4-204ENST00000495122 PXDNLA1KZ92 1463 aa20.49■□□□□ 0.87
CBX4-204ENST00000495122 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
CBX4-204ENST00000495122 GRIN3BO60391 1043 aa20.48■□□□□ 0.87
CBX4-204ENST00000495122 MMP10P09238 476 aa20.48■□□□□ 0.87
CBX4-204ENST00000495122 CRKLP46109 303 aaKnown RBP20.48■□□□□ 0.87
CBX4-204ENST00000495122 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
CBX4-204ENST00000495122 INTS3Q68E01 1043 aaKnown RBP20.47■□□□□ 0.87
CBX4-204ENST00000495122 GYS1P13807 737 aa20.46■□□□□ 0.87
CBX4-204ENST00000495122 FAM161AQ3B820 660 aa20.46■□□□□ 0.87
CBX4-204ENST00000495122 IL17REQ8NFR9 667 aa20.46■□□□□ 0.87
CBX4-204ENST00000495122 SBF1O95248 1867 aa20.45■□□□□ 0.86
CBX4-204ENST00000495122 LAMB4A4D0S4 1761 aa20.45■□□□□ 0.86
CBX4-204ENST00000495122 ELL2O00472 640 aaPredicted RBP20.45■□□□□ 0.86
CBX4-204ENST00000495122 ZBTB7BO15156 539 aaPredicted RBP20.45■□□□□ 0.86
CBX4-204ENST00000495122 RFC4P35249 363 aa20.45■□□□□ 0.86
CBX4-204ENST00000495122 CCDC30Q5VVM6 783 aa20.45■□□□□ 0.86
CBX4-204ENST00000495122 NLGN1Q8N2Q7 840 aa20.45■□□□□ 0.86
CBX4-204ENST00000495122 ANP32AP39687 249 aaKnown RBP20.44■□□□□ 0.86
CBX4-204ENST00000495122 SLC39A6Q13433 755 aa20.44■□□□□ 0.86
CBX4-204ENST00000495122 SMC5Q8IY18 1101 aa20.44■□□□□ 0.86
CBX4-204ENST00000495122 STK31Q9BXU1 1019 aa20.44■□□□□ 0.86
CBX4-204ENST00000495122 CCDC88AQ3V6T2 1871 aa20.43■□□□□ 0.86
CBX4-204ENST00000495122 ANKRD31Q8N7Z5 1873 aa20.43■□□□□ 0.86
CBX4-204ENST00000495122 INTS5Q6P9B9 1019 aaKnown RBP20.43■□□□□ 0.86
CBX4-204ENST00000495122 DNAJC10Q8IXB1 793 aa20.43■□□□□ 0.86
CBX4-204ENST00000495122 USP42Q9H9J4 1324 aaKnown RBP20.43■□□□□ 0.86
CBX4-204ENST00000495122 CACNA1SQ13698 1873 aa20.42■□□□□ 0.86
CBX4-204ENST00000495122 CCDC87Q9NVE4 849 aa20.41■□□□□ 0.86
CBX4-204ENST00000495122 SRP68Q9UHB9 627 aaKnown RBP20.41■□□□□ 0.86
CBX4-204ENST00000495122 ADCY9O60503 1353 aa20.41■□□□□ 0.86
CBX4-204ENST00000495122 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
CBX4-204ENST00000495122 GCC1Q96CN9 775 aa20.4■□□□□ 0.86
CBX4-204ENST00000495122 COL15A1P39059 1388 aa20.39■□□□□ 0.85
CBX4-204ENST00000495122 CCT4P50991 539 aaKnown RBP20.39■□□□□ 0.85
CBX4-204ENST00000495122 TEFQ10587 303 aa20.39■□□□□ 0.85
CBX4-204ENST00000495122 VSIG10Q8N0Z9 540 aa20.39■□□□□ 0.85
CBX4-204ENST00000495122 PDZRN3Q9UPQ7 1066 aa20.39■□□□□ 0.85
CBX4-204ENST00000495122 ATP10DQ9P241 1426 aa20.38■□□□□ 0.85
CBX4-204ENST00000495122 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
CBX4-204ENST00000495122 WWC3Q9ULE0 1092 aa20.38■□□□□ 0.85
CBX4-204ENST00000495122 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
CBX4-204ENST00000495122 COL11A2P13942 1736 aaPredicted RBP20.37■□□□□ 0.85
CBX4-204ENST00000495122 RGS3P49796 1198 aa20.37■□□□□ 0.85
CBX4-204ENST00000495122 TGFB2P61812 414 aa20.37■□□□□ 0.85
CBX4-204ENST00000495122 KRT24Q2M2I5 525 aa20.37■□□□□ 0.85
CBX4-204ENST00000495122 ARFGEF2Q9Y6D5 1785 aa20.36■□□□□ 0.85
CBX4-204ENST00000495122 DDR1Q08345 913 aa20.36■□□□□ 0.85
CBX4-204ENST00000495122 ZBTB1Q9Y2K1 713 aa20.36■□□□□ 0.85
CBX4-204ENST00000495122 HEG1Q9ULI3 1381 aa20.35■□□□□ 0.85
CBX4-204ENST00000495122 C8orf34Q49A92 452 aa20.35■□□□□ 0.85
CBX4-204ENST00000495122 RPAP2Q8IXW5 612 aaPredicted RBP20.35■□□□□ 0.85
CBX4-204ENST00000495122 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
CBX4-204ENST00000495122 EIF4A1P60842 406 aaKnown RBP20.34■□□□□ 0.85
CBX4-204ENST00000495122 TTC5Q8N0Z6 440 aa20.34■□□□□ 0.85
CBX4-204ENST00000495122 USPL1Q5W0Q7 1092 aa20.33■□□□□ 0.85
CBX4-204ENST00000495122 DICER1Q9UPY3 1922 aaKnown RBP20.32■□□□□ 0.84
CBX4-204ENST00000495122 A0A0G2JLW4 131 aa20.32■□□□□ 0.84
CBX4-204ENST00000495122 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
CBX4-204ENST00000495122 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
CBX4-204ENST00000495122 DPEP1P16444 411 aa20.32■□□□□ 0.84
CBX4-204ENST00000495122 NUCB1Q02818 461 aa20.32■□□□□ 0.84
CBX4-204ENST00000495122 ZNF790Q6PG37 636 aa20.32■□□□□ 0.84
CBX4-204ENST00000495122 ZNF496Q96IT1 587 aaPredicted RBP20.32■□□□□ 0.84
CBX4-204ENST00000495122 NARFQ9UHQ1 456 aa20.32■□□□□ 0.84
CBX4-204ENST00000495122 TIAM2Q8IVF5 1701 aa20.31■□□□□ 0.84
CBX4-204ENST00000495122 ZPR1O75312 459 aa20.31■□□□□ 0.84
CBX4-204ENST00000495122 GIGYF1O75420 1035 aaPredicted RBP20.31■□□□□ 0.84
CBX4-204ENST00000495122 TM4SF1P30408 202 aa20.31■□□□□ 0.84
CBX4-204ENST00000495122 C1QTNF8P60827 252 aa20.31■□□□□ 0.84
CBX4-204ENST00000495122 FLIIQ13045 1269 aa20.31■□□□□ 0.84
CBX4-204ENST00000495122 HDGFL1Q5TGJ6 251 aa20.31■□□□□ 0.84
CBX4-204ENST00000495122 NUP98P52948 1817 aa20.3■□□□□ 0.84
CBX4-204ENST00000495122 ANKRD44Q8N8A2 993 aa20.3■□□□□ 0.84
CBX4-204ENST00000495122 DDRGK1Q96HY6 314 aa20.3■□□□□ 0.84
CBX4-204ENST00000495122 IPO9Q96P70 1041 aaKnown RBP20.3■□□□□ 0.84
CBX4-204ENST00000495122 KCNA3P22001 575 aa20.29■□□□□ 0.84
CBX4-204ENST00000495122 BCL2L12Q9HB09 334 aa20.29■□□□□ 0.84
CBX4-204ENST00000495122 BCS1LQ9Y276 419 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms