RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 SMIM5Q71RC9 77 aa11.02□□□□□ -0.65
GPATCH4-207ENST00000494414 RTF1Q92541 710 aaKnown RBP11.02□□□□□ -0.65
GPATCH4-207ENST00000494414 RTCBQ9Y3I0 505 aaKnown RBP11.02□□□□□ -0.65
GPATCH4-207ENST00000494414 RIOK3O14730 519 aaKnown RBP11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 GABBR2O75899 941 aa11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 ZNF853P0CG23 659 aa11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 GYS1P13807 737 aa11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 CCDC27Q2M243 656 aa11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 IFNL1Q8IU54 200 aa11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 ARHGEF1Q92888 912 aaKnown RBP11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 TEX13AQ9BXU3 409 aaPredicted RBP11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 TSHZ2Q9NRE2 1034 aa11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 CACNA1FO60840 1977 aa11.01□□□□□ -0.65
GPATCH4-207ENST00000494414 LAMB2P55268 1798 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 PXDNLA1KZ92 1463 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
GPATCH4-207ENST00000494414 NEFMP07197 916 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 IL6STP40189 918 aaPredicted RBP11□□□□□ -0.65
GPATCH4-207ENST00000494414 RIPK4P57078 832 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 EIF4A1P60842 406 aaKnown RBP11□□□□□ -0.65
GPATCH4-207ENST00000494414 LRP10Q7Z4F1 713 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 CCDC146Q8IYE0 955 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 ARXQ96QS3 562 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 TAOK2Q9UL54 1235 aa11□□□□□ -0.65
GPATCH4-207ENST00000494414 PRAMEF22A3QJZ6 481 aa10.99□□□□□ -0.65
GPATCH4-207ENST00000494414 CHL1O00533 1208 aa10.99□□□□□ -0.65
GPATCH4-207ENST00000494414 SNRPA1P09661 255 aaKnown RBP10.99□□□□□ -0.65
GPATCH4-207ENST00000494414 RNF25Q96BH1 459 aaPredicted RBP10.99□□□□□ -0.65
GPATCH4-207ENST00000494414 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
GPATCH4-207ENST00000494414 NARFQ9UHQ1 456 aa10.99□□□□□ -0.65
GPATCH4-207ENST00000494414 ERBB4Q15303 1308 aa10.99□□□□□ -0.65
GPATCH4-207ENST00000494414 TNRC6CQ9HCJ0 1690 aaKnown RBP10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 UTRNP46939 3433 aa10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 GIGYF1O75420 1035 aaPredicted RBP10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 PHF14O94880 888 aa10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 STARD3NLO95772 234 aa10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 TRAPPC3LQ5T215 181 aa10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 SYT17Q9BSW7 474 aa10.98□□□□□ -0.65
GPATCH4-207ENST00000494414 POLD1P28340 1107 aa10.97□□□□□ -0.65
GPATCH4-207ENST00000494414 TM4SF1P30408 202 aa10.97□□□□□ -0.65
GPATCH4-207ENST00000494414 DDR1Q08345 913 aa10.97□□□□□ -0.65
GPATCH4-207ENST00000494414 MRS2Q9HD23 443 aa10.97□□□□□ -0.65
GPATCH4-207ENST00000494414 RRP7AQ9Y3A4 280 aaKnown RBP10.97□□□□□ -0.65
GPATCH4-207ENST00000494414 CD2APQ9Y5K6 639 aa10.97□□□□□ -0.65
GPATCH4-207ENST00000494414 USP16Q9Y5T5 823 aa10.97□□□□□ -0.65
GPATCH4-207ENST00000494414 ATP10DQ9P241 1426 aa10.97□□□□□ -0.65
GPATCH4-207ENST00000494414 RIC1Q4ADV7 1423 aa10.96□□□□□ -0.65
GPATCH4-207ENST00000494414 ZNF521Q96K83 1311 aa10.96□□□□□ -0.65
GPATCH4-207ENST00000494414 APAF1O14727 1248 aa10.96□□□□□ -0.65
GPATCH4-207ENST00000494414 CAMTA2O94983 1202 aa10.96□□□□□ -0.65
GPATCH4-207ENST00000494414 HOXB7P09629 217 aa10.96□□□□□ -0.65
GPATCH4-207ENST00000494414 MSL1Q68DK7 614 aa10.96□□□□□ -0.65
GPATCH4-207ENST00000494414 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.65
GPATCH4-207ENST00000494414 SRP68Q9UHB9 627 aaKnown RBP10.96□□□□□ -0.65
GPATCH4-207ENST00000494414 IBTKQ9P2D0 1353 aaPredicted RBP10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 IL16Q14005 1332 aa10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 POLRMTO00411 1230 aaKnown RBP10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 A1BGP04217 495 aa10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 PDIA6Q15084 440 aa10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 CFAP44Q96MT7 982 aa10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 IFT57Q9NWB7 429 aa10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 MIS18AQ9NYP9 233 aa10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
GPATCH4-207ENST00000494414 A0A087WZG4 1122 aa10.94□□□□□ -0.66
GPATCH4-207ENST00000494414 MMP10P09238 476 aa10.94□□□□□ -0.66
GPATCH4-207ENST00000494414 RFC4P35249 363 aa10.94□□□□□ -0.66
GPATCH4-207ENST00000494414 ANP32EQ9BTT0 268 aa10.94□□□□□ -0.66
GPATCH4-207ENST00000494414 PPP1R1BQ9UD71 204 aaPredicted RBP10.94□□□□□ -0.66
GPATCH4-207ENST00000494414 TSPYL4Q9UJ04 414 aa10.94□□□□□ -0.66
GPATCH4-207ENST00000494414 CACNA1SQ13698 1873 aa10.93□□□□□ -0.66
GPATCH4-207ENST00000494414 CARMIL3Q8ND23 1372 aa10.93□□□□□ -0.66
GPATCH4-207ENST00000494414 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
GPATCH4-207ENST00000494414 USPL1Q5W0Q7 1092 aa10.93□□□□□ -0.66
GPATCH4-207ENST00000494414 NLGN2Q8NFZ4 835 aa10.93□□□□□ -0.66
GPATCH4-207ENST00000494414 SBF1O95248 1867 aa10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 FER1L6Q2WGJ9 1857 aa10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 PSEN1P49768 467 aa10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 HNRNPUQ00839 825 aaKnown RBP eCLIP10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 NFIXQ14938 502 aa10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 WWC1Q8IX03 1113 aa10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 NGEFQ8N5V2 710 aa10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 DCBLD2Q96PD2 775 aa10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 MBIPQ9NS73 344 aa10.92□□□□□ -0.66
GPATCH4-207ENST00000494414 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
GPATCH4-207ENST00000494414 CLEC4GQ6UXB4 293 aa10.91□□□□□ -0.66
GPATCH4-207ENST00000494414 LRRC37AA6NMS7 1700 aa10.91□□□□□ -0.66
GPATCH4-207ENST00000494414 DICER1Q9UPY3 1922 aaKnown RBP10.9□□□□□ -0.66
GPATCH4-207ENST00000494414 GNAI1P63096 354 aa10.9□□□□□ -0.66
GPATCH4-207ENST00000494414 KRT24Q2M2I5 525 aa10.9□□□□□ -0.66
GPATCH4-207ENST00000494414 TRPC6Q9Y210 931 aa10.9□□□□□ -0.66
GPATCH4-207ENST00000494414 MAP3K15Q6ZN16 1313 aa10.89□□□□□ -0.67
GPATCH4-207ENST00000494414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms