RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 WDHD1O75717 1129 aaPredicted RBP8.92□□□□□ -0.98
SNX13-210ENST00000494402 IGFBP4P22692 258 aa8.92□□□□□ -0.98
SNX13-210ENST00000494402 EIF1AXP47813 144 aaKnown RBP8.92□□□□□ -0.98
SNX13-210ENST00000494402 PDXDC2PQ6P474 469 aa8.92□□□□□ -0.98
SNX13-210ENST00000494402 C11orf96Q7Z7L8 435 aa8.92□□□□□ -0.98
SNX13-210ENST00000494402 APPBP2Q92624 585 aa8.92□□□□□ -0.98
SNX13-210ENST00000494402 GPKOWQ92917 476 aaPredicted RBP eCLIP8.92□□□□□ -0.98
SNX13-210ENST00000494402 CCDC85AQ96PX6 553 aaPredicted RBP8.92□□□□□ -0.98
SNX13-210ENST00000494402 KIAA1468Q9P260 1216 aa8.92□□□□□ -0.98
SNX13-210ENST00000494402 AXIN2Q9Y2T1 843 aa8.92□□□□□ -0.98
SNX13-210ENST00000494402 PLIN1O60240 522 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 NR1I2O75469 434 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 NFX1Q12986 1120 aaKnown RBP8.91□□□□□ -0.98
SNX13-210ENST00000494402 Q3C1V9 767 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 CLEC4GQ6UXB4 293 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 SEC16BQ96JE7 1060 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 NIF3L1Q9GZT8 377 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 HOMER2Q9NSB8 354 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 SNTG2Q9NY99 539 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 RABGEF1Q9UJ41 708 aa8.91□□□□□ -0.98
SNX13-210ENST00000494402 SMAPO00193 183 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 KIF3BO15066 747 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 MZF1P28698 734 aaPredicted RBP8.9□□□□□ -0.98
SNX13-210ENST00000494402 SLC4A3P48751 1232 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 LRP10Q7Z4F1 713 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 RASGRP4Q8TDF6 673 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 SCYL1Q96KG9 808 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 DEPDC7Q96QD5 511 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 C12orf49Q9H741 205 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 ZNF408Q9H9D4 720 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 SPG7Q9UQ90 795 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 EID1Q9Y6B2 187 aa8.9□□□□□ -0.98
SNX13-210ENST00000494402 VIL1P09327 827 aaKnown RBP8.89□□□□□ -0.99
SNX13-210ENST00000494402 EIF4BP23588 611 aaKnown RBP8.89□□□□□ -0.99
SNX13-210ENST00000494402 GYS2P54840 703 aa8.89□□□□□ -0.99
SNX13-210ENST00000494402 FOXD4Q12950 439 aaPredicted RBP8.89□□□□□ -0.99
SNX13-210ENST00000494402 SAFB2Q14151 953 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNX13-210ENST00000494402 C16orf46Q6P387 395 aa8.89□□□□□ -0.99
SNX13-210ENST00000494402 HOMER1Q86YM7 354 aa8.89□□□□□ -0.99
SNX13-210ENST00000494402 ARMC2Q8NEN0 867 aa8.89□□□□□ -0.99
SNX13-210ENST00000494402 SH3TC2Q8TF17 1288 aa8.89□□□□□ -0.99
SNX13-210ENST00000494402 MAP10Q9P2G4 905 aa8.89□□□□□ -0.99
SNX13-210ENST00000494402 HDAC1Q13547 482 aaPredicted RBP8.88□□□□□ -0.99
SNX13-210ENST00000494402 MAP9Q49MG5 647 aa8.88□□□□□ -0.99
SNX13-210ENST00000494402 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
SNX13-210ENST00000494402 ANKS3Q6ZW76 656 aa8.88□□□□□ -0.99
SNX13-210ENST00000494402 KIAA0907Q7Z7F0 614 aaPredicted RBP8.88□□□□□ -0.99
SNX13-210ENST00000494402 OCSTAMPQ9BR26 566 aa8.88□□□□□ -0.99
SNX13-210ENST00000494402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.88□□□□□ -0.99
SNX13-210ENST00000494402 ESPNB1AK53 854 aa8.87□□□□□ -0.99
SNX13-210ENST00000494402 RASA3Q14644 834 aa8.87□□□□□ -0.99
SNX13-210ENST00000494402 ADAM32Q8TC27 787 aa8.87□□□□□ -0.99
SNX13-210ENST00000494402 VPS9D1Q9Y2B5 631 aa8.87□□□□□ -0.99
SNX13-210ENST00000494402 CCDC189A1A4V9 331 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 TNFRSF10BO14763 440 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 CFHP08603 1231 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 USP4Q13107 963 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 RAB33AQ14088 237 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 NBPF14Q5TI25 921 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 KRBA2Q6ZNG9 492 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 SENP7Q9BQF6 1050 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 CFHR5Q9BXR6 569 aa8.86□□□□□ -0.99
SNX13-210ENST00000494402 THRAP3Q9Y2W1 955 aaKnown RBP8.86□□□□□ -0.99
SNX13-210ENST00000494402 CAND2O75155 1236 aa8.85□□□□□ -0.99
SNX13-210ENST00000494402 CTHP32929 405 aa8.85□□□□□ -0.99
SNX13-210ENST00000494402 GNALP38405 381 aa8.85□□□□□ -0.99
SNX13-210ENST00000494402 MASP1P48740 699 aa8.85□□□□□ -0.99
SNX13-210ENST00000494402 EVA1CP58658 441 aa8.85□□□□□ -0.99
SNX13-210ENST00000494402 EXOSC10Q01780 885 aaKnown RBP8.85□□□□□ -0.99
SNX13-210ENST00000494402 CBLBQ13191 982 aa8.85□□□□□ -0.99
SNX13-210ENST00000494402 DZIP3Q86Y13 1208 aaKnown RBP8.85□□□□□ -0.99
SNX13-210ENST00000494402 STIM2Q9P246 746 aa8.85□□□□□ -0.99
SNX13-210ENST00000494402 USP31Q70CQ4 1352 aa8.85□□□□□ -0.99
SNX13-210ENST00000494402 TK2O00142 265 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 HCLS1P14317 486 aaPredicted RBP8.84□□□□□ -0.99
SNX13-210ENST00000494402 NOS2P35228 1153 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 HDGFP51858 240 aaKnown RBP8.84□□□□□ -0.99
SNX13-210ENST00000494402 PTPRNQ16849 979 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 WDR75Q8IWA0 830 aaKnown RBP8.84□□□□□ -0.99
SNX13-210ENST00000494402 GAS2L2Q8NHY3 880 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 TRPM4Q8TD43 1214 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 IL17RAQ96F46 866 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 CSRNP1Q96S65 589 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 APBA2Q99767 749 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 ARHGAP9Q9BRR9 750 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
SNX13-210ENST00000494402 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
SNX13-210ENST00000494402 SEPT9Q9UHD8 586 aaPredicted RBP8.84□□□□□ -0.99
SNX13-210ENST00000494402 V9GY48 417 aaPredicted RBP8.84□□□□□ -0.99
SNX13-210ENST00000494402 FAM221BA6H8Z2 402 aa8.83□□□□□ -1
SNX13-210ENST00000494402 KLF4O43474 513 aa8.83□□□□□ -1
SNX13-210ENST00000494402 USP5P45974 858 aa8.83□□□□□ -1
SNX13-210ENST00000494402 DHX8Q14562 1220 aaKnown RBP8.83□□□□□ -1
SNX13-210ENST00000494402 FAM98CQ17RN3 349 aaKnown RBP8.83□□□□□ -1
SNX13-210ENST00000494402 FAM9BQ8IZU0 186 aa8.83□□□□□ -1
SNX13-210ENST00000494402 ABTB2Q8N961 1025 aa8.83□□□□□ -1
SNX13-210ENST00000494402 FEZ1Q99689 392 aa8.83□□□□□ -1
SNX13-210ENST00000494402 NAP1L4Q99733 375 aaKnown RBP8.83□□□□□ -1
SNX13-210ENST00000494402 MTA3Q9BTC8 594 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms