RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 NECTIN2Q92692 538 aa21.02■□□□□ 0.96
SATB1-217ENST00000493952 WWC3Q9ULE0 1092 aa21.02■□□□□ 0.96
SATB1-217ENST00000493952 ARFGEF2Q9Y6D5 1785 aa21.01■□□□□ 0.95
SATB1-217ENST00000493952 ANXA1P04083 346 aa21.01■□□□□ 0.95
SATB1-217ENST00000493952 PROSER3Q2NL68 480 aa21.01■□□□□ 0.95
SATB1-217ENST00000493952 CLEC4GQ6UXB4 293 aa21.01■□□□□ 0.95
SATB1-217ENST00000493952 TTLL7Q6ZT98 887 aa21.01■□□□□ 0.95
SATB1-217ENST00000493952 LRP10Q7Z4F1 713 aa21.01■□□□□ 0.95
SATB1-217ENST00000493952 ZNF652Q9Y2D9 606 aa21.01■□□□□ 0.95
SATB1-217ENST00000493952 A0A0G2JLW4 131 aa21■□□□□ 0.95
SATB1-217ENST00000493952 HOXB7P09629 217 aa21■□□□□ 0.95
SATB1-217ENST00000493952 DPEP1P16444 411 aa21■□□□□ 0.95
SATB1-217ENST00000493952 HLFQ16534 295 aa21■□□□□ 0.95
SATB1-217ENST00000493952 SETDB2Q96T68 719 aa21■□□□□ 0.95
SATB1-217ENST00000493952 SALL2Q9Y467 1007 aaPredicted RBP21■□□□□ 0.95
SATB1-217ENST00000493952 RGL2O15211 777 aa20.99■□□□□ 0.95
SATB1-217ENST00000493952 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
SATB1-217ENST00000493952 CACNA1FO60840 1977 aa20.99■□□□□ 0.95
SATB1-217ENST00000493952 MAP3K15Q6ZN16 1313 aa20.99■□□□□ 0.95
SATB1-217ENST00000493952 HDGFL1Q5TGJ6 251 aa20.98■□□□□ 0.95
SATB1-217ENST00000493952 KIF6Q6ZMV9 814 aa20.98■□□□□ 0.95
SATB1-217ENST00000493952 PRR5LQ6MZQ0 368 aa20.97■□□□□ 0.95
SATB1-217ENST00000493952 TSR2Q969E8 191 aaKnown RBP20.97■□□□□ 0.95
SATB1-217ENST00000493952 ZBTB3Q9H5J0 574 aa20.97■□□□□ 0.95
SATB1-217ENST00000493952 DDX21Q9NR30 783 aaKnown RBP eCLIP20.97■□□□□ 0.95
SATB1-217ENST00000493952 CHPF2Q9P2E5 772 aa20.97■□□□□ 0.95
SATB1-217ENST00000493952 ATP10DQ9P241 1426 aa20.96■□□□□ 0.95
SATB1-217ENST00000493952 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
SATB1-217ENST00000493952 ERVV-1B6SEH8 477 aa20.96■□□□□ 0.95
SATB1-217ENST00000493952 CCER2I3L3R5 266 aa20.96■□□□□ 0.95
SATB1-217ENST00000493952 KCNA3P22001 575 aa20.96■□□□□ 0.95
SATB1-217ENST00000493952 CHRNA5P30532 468 aa20.96■□□□□ 0.95
SATB1-217ENST00000493952 C8orf58Q8NAV2 365 aa20.96■□□□□ 0.95
SATB1-217ENST00000493952 NIP7Q9Y221 180 aaKnown RBP eCLIP20.96■□□□□ 0.95
SATB1-217ENST00000493952 IL16Q14005 1332 aa20.96■□□□□ 0.95
SATB1-217ENST00000493952 ELL2O00472 640 aaPredicted RBP20.95■□□□□ 0.94
SATB1-217ENST00000493952 GRIN3BO60391 1043 aa20.95■□□□□ 0.94
SATB1-217ENST00000493952 CCDC24Q8N4L8 307 aa20.95■□□□□ 0.94
SATB1-217ENST00000493952 CNBD1Q8NA66 436 aa20.94■□□□□ 0.94
SATB1-217ENST00000493952 LAMB2P55268 1798 aa20.94■□□□□ 0.94
SATB1-217ENST00000493952 CCDC88AQ3V6T2 1871 aa20.94■□□□□ 0.94
SATB1-217ENST00000493952 SBF1O95248 1867 aa20.93■□□□□ 0.94
SATB1-217ENST00000493952 DIEXFQ68CQ4 756 aaKnown RBP20.93■□□□□ 0.94
SATB1-217ENST00000493952 WDR63Q8IWG1 891 aa20.93■□□□□ 0.94
SATB1-217ENST00000493952 XAGE3Q8WTP9 111 aa20.93■□□□□ 0.94
SATB1-217ENST00000493952 YY1P25490 414 aa20.92■□□□□ 0.94
SATB1-217ENST00000493952 AIMP1Q12904 312 aaKnown RBP20.92■□□□□ 0.94
SATB1-217ENST00000493952 GIGYF2Q6Y7W6 1299 aaKnown RBP20.92■□□□□ 0.94
SATB1-217ENST00000493952 COPS6Q7L5N1 327 aa20.92■□□□□ 0.94
SATB1-217ENST00000493952 NBPF5PQ86XG9 351 aaPredicted RBP20.92■□□□□ 0.94
SATB1-217ENST00000493952 TSPYL6Q8N831 410 aa20.92■□□□□ 0.94
SATB1-217ENST00000493952 PIM2Q9P1W9 311 aa20.92■□□□□ 0.94
SATB1-217ENST00000493952 DBF4Q9UBU7 674 aaPredicted RBP20.92■□□□□ 0.94
SATB1-217ENST00000493952 BCS1LQ9Y276 419 aa20.92■□□□□ 0.94
SATB1-217ENST00000493952 FAM177BA6PVY3 158 aa20.91■□□□□ 0.94
SATB1-217ENST00000493952 NPHP1O15259 732 aa20.91■□□□□ 0.94
SATB1-217ENST00000493952 ST5P78524 1137 aa20.91■□□□□ 0.94
SATB1-217ENST00000493952 FANCIQ9NVI1 1328 aa20.91■□□□□ 0.94
SATB1-217ENST00000493952 SLX4Q8IY92 1834 aa20.9■□□□□ 0.94
SATB1-217ENST00000493952 UBN2Q6ZU65 1347 aa20.9■□□□□ 0.94
SATB1-217ENST00000493952 GPTP24298 496 aa20.9■□□□□ 0.94
SATB1-217ENST00000493952 C2CD5Q86YS7 1000 aa20.9■□□□□ 0.94
SATB1-217ENST00000493952 BRIP1Q9BX63 1249 aa20.9■□□□□ 0.94
SATB1-217ENST00000493952 ZNF34Q8IZ26 560 aa20.89■□□□□ 0.93
SATB1-217ENST00000493952 SPINK5Q9NQ38 1064 aaPredicted RBP20.89■□□□□ 0.93
SATB1-217ENST00000493952 DDX60Q8IY21 1712 aaKnown RBP20.88■□□□□ 0.93
SATB1-217ENST00000493952 H0YIN7 160 aa20.88■□□□□ 0.93
SATB1-217ENST00000493952 PDE6BP35913 854 aa20.88■□□□□ 0.93
SATB1-217ENST00000493952 DALRD3Q5D0E6 543 aaKnown RBP20.88■□□□□ 0.93
SATB1-217ENST00000493952 TPTE2Q6XPS3 522 aa20.88■□□□□ 0.93
SATB1-217ENST00000493952 HYPKQ9NX55 129 aa20.88■□□□□ 0.93
SATB1-217ENST00000493952 FER1L6Q2WGJ9 1857 aa20.88■□□□□ 0.93
SATB1-217ENST00000493952 IBTKQ9P2D0 1353 aaPredicted RBP20.87■□□□□ 0.93
SATB1-217ENST00000493952 ZNF521Q96K83 1311 aa20.87■□□□□ 0.93
SATB1-217ENST00000493952 ABCC12Q96J65 1359 aa20.86■□□□□ 0.93
SATB1-217ENST00000493952 TWISTNBQ3B726 338 aaPredicted RBP20.86■□□□□ 0.93
SATB1-217ENST00000493952 MIER1Q8N108 512 aa20.86■□□□□ 0.93
SATB1-217ENST00000493952 CCDC30Q5VVM6 783 aa20.85■□□□□ 0.93
SATB1-217ENST00000493952 SUSD4Q5VX71 490 aa20.85■□□□□ 0.93
SATB1-217ENST00000493952 NUTM1Q86Y26 1132 aa20.85■□□□□ 0.93
SATB1-217ENST00000493952 NYXQ9GZU5 481 aa20.85■□□□□ 0.93
SATB1-217ENST00000493952 PHAXQ9H814 394 aaKnown RBP20.85■□□□□ 0.93
SATB1-217ENST00000493952 PDZRN3Q9UPQ7 1066 aa20.85■□□□□ 0.93
SATB1-217ENST00000493952 NTSR2O95665 410 aa20.84■□□□□ 0.93
SATB1-217ENST00000493952 GTF2E1P29083 439 aaPredicted RBP20.84■□□□□ 0.93
SATB1-217ENST00000493952 HSP90AB3PQ58FF7 597 aa20.84■□□□□ 0.93
SATB1-217ENST00000493952 PLBD2Q8NHP8 589 aa20.84■□□□□ 0.93
SATB1-217ENST00000493952 DICER1Q9UPY3 1922 aaKnown RBP20.83■□□□□ 0.93
SATB1-217ENST00000493952 EXOSC9Q06265 439 aaKnown RBP20.83■□□□□ 0.93
SATB1-217ENST00000493952 GOLGA2Q08379 1002 aa20.83■□□□□ 0.93
SATB1-217ENST00000493952 ERFEQ4G0M1 354 aa20.83■□□□□ 0.93
SATB1-217ENST00000493952 PARP10Q53GL7 1025 aa20.83■□□□□ 0.93
SATB1-217ENST00000493952 ANKRD13DQ6ZTN6 518 aa20.83■□□□□ 0.93
SATB1-217ENST00000493952 TTLL6Q8N841 843 aa20.83■□□□□ 0.93
SATB1-217ENST00000493952 CHMP4AQ9BY43 222 aa20.83■□□□□ 0.93
SATB1-217ENST00000493952 RIC1Q4ADV7 1423 aa20.83■□□□□ 0.93
SATB1-217ENST00000493952 TAF1P21675 1872 aa20.82■□□□□ 0.92
SATB1-217ENST00000493952 TCERG1O14776 1098 aaKnown RBP20.82■□□□□ 0.92
SATB1-217ENST00000493952 SRGNP10124 158 aa20.82■□□□□ 0.92
SATB1-217ENST00000493952 TCIRG1Q13488 830 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms