RNA–Protein interactions for RNA: ENST00000493855.1

CCT6A-208, Transcript of chaperonin containing TCP1 subunit 6A, human

TSL 2

Gene CCT6A, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT6A-208	ENST00000493855	MAPK8	P45983	427 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	XPC	Q01831	940 aa	Predicted RBP	4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	PLCB3	Q01970	1234 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	EHHADH	Q08426	723 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	COL19A1	Q14993	1142 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	PKDCC	Q504Y2	493 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	C4orf17	Q53FE4	359 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	MRPL14	Q6P1L8	145 aa	Known RBP	4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	PRICKLE2	Q7Z3G6	844 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	NPAS4	Q8IUM7	802 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	PGBD3	Q8N328	593 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	ZDHHC1	Q8WTX9	485 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	PIK3R5	Q8WYR1	880 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	EDEM1	Q92611	657 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	GRIP2	Q9C0E4	1043 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	MRS2	Q9HD23	443 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	TIMMDC1	Q9NPL8	285 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	KLK14	Q9P0G3	267 aa		4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855	GPC6	Q9Y625	555 aa	Predicted RBP	4.89	□□□□□ -1.63
CCT6A-208	ENST00000493855		A0A1B0GTH6	734 aa		4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	TTLL8	A6PVC2	850 aa		4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	ZNF16	P17020	682 aa	Predicted RBP	4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	MZF1	P28698	734 aa	Predicted RBP	4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	CTSO	P43234	321 aa	Predicted RBP	4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	C8orf34	Q49A92	452 aa		4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	SH3PXD2A	Q5TCZ1	1133 aa		4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	TMC7	Q7Z402	723 aa		4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	TREML1	Q86YW5	311 aa		4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	KDF1	Q8NAX2	398 aa	Predicted RBP	4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	MRRF	Q96E11	262 aa	Known RBP	4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	LRFN2	Q9ULH4	789 aa		4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.88	□□□□□ -1.63
CCT6A-208	ENST00000493855	SPATA31C2	B4DYI2	1134 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	TGFBR3L	H3BV60	316 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	TNFRSF10B	O14763	440 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	TXLNA	P40222	546 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	POU4F2	Q12837	409 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	CTC1	Q2NKJ3	1217 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	WDR44	Q5JSH3	913 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	POTEA	Q6S8J7	498 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	GPR152	Q8TDT2	470 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	CCDC87	Q9NVE4	849 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	POLI	Q9UNA4	740 aa		4.87	□□□□□ -1.63
CCT6A-208	ENST00000493855	AXIN1	O15169	862 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	FZD6	O60353	706 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	MICAL2	O94851	1124 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	RHOQ	P17081	205 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	ARSD	P51689	593 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	EFHC2	Q5JST6	749 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	ATCAY	Q86WG3	371 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	ETFBKMT	Q8IXQ9	262 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	RNF217	Q8TC41	542 aa		4.86	□□□□□ -1.63
CCT6A-208	ENST00000493855	FIGNL2	A6NMB9	653 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	TREH	O43280	583 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	MAN1A2	O60476	641 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	PDGFA	P04085	211 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	LDHB	P07195	334 aa	Known RBP	4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	IDH3A	P50213	366 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	IER5	Q5VY09	327 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	LRRC69	Q6ZNQ3	347 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	TRIM67	Q6ZTA4	783 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	NUDT16	Q96DE0	195 aa	Known RBP	4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	SUSD3	Q96L08	255 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	GPAM	Q9HCL2	828 aa		4.85	□□□□□ -1.63
CCT6A-208	ENST00000493855	PRPF40A	O75400	957 aa	Known RBP	4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	DGAT1	O75907	488 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	P4HB	P07237	508 aa	Known RBP	4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	BMP1	P13497	986 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	ECM1	Q16610	540 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	ALG1L	Q6GMV1	187 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	ZNF438	Q7Z4V0	828 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	CMTR1	Q8N1G2	835 aa	Known RBP	4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	HSH2D	Q96JZ2	352 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	CEP63	Q96MT8	703 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	FAM129B	Q96TA1	746 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	GAS2L1	Q99501	681 aa	Predicted RBP	4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	NIF3L1	Q9GZT8	377 aa		4.84	□□□□□ -1.63
CCT6A-208	ENST00000493855	PNMA6F	A0A0J9YX94	578 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	UBAP1L	F5GYI3	381 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	ZBTB39	O15060	712 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	GFRA3	O60609	400 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	MSX1	P28360	303 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	FMR1	Q06787	632 aa	Known RBP eCLIP	4.83	□□□□□ -1.64	1e-6	■■■■□ 23.7
CCT6A-208	ENST00000493855	PSMD2	Q13200	908 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	LAPTM4A	Q15012	233 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	FIGNL1	Q6PIW4	674 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	RIPOR1	Q6ZS17	1223 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	FBXO33	Q7Z6M2	555 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	ZNF295-AS1	Q8N0V1	137 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	GJD3	Q8N144	294 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	ALKBH8	Q96BT7	664 aa	Known RBP	4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855	VTI1B	Q9UEU0	232 aa		4.83	□□□□□ -1.64
CCT6A-208	ENST00000493855		A0A1W2PNR3	127 aa		4.82	□□□□□ -1.64
CCT6A-208	ENST00000493855	UNCX	A6NJT0	531 aa		4.82	□□□□□ -1.64
CCT6A-208	ENST00000493855	NRG2	O14511	850 aa	Predicted RBP	4.82	□□□□□ -1.64
CCT6A-208	ENST00000493855	GPR182	O15218	404 aa		4.82	□□□□□ -1.64
CCT6A-208	ENST00000493855	AVP	P01185	164 aa		4.82	□□□□□ -1.64
CCT6A-208	ENST00000493855	F11	P03951	625 aa		4.82	□□□□□ -1.64
CCT6A-208	ENST00000493855	TSNAXIP1	Q2TAA8	658 aa		4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms