RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 ORC4O43929 436 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 NAT2P11245 290 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 EXOSC10Q01780 885 aaKnown RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 ALFQ53S48 1182 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 ACBD5Q5T8D3 534 aaPredicted RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 HELQQ8TDG4 1101 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 SMARCC1Q92922 1105 aaPredicted RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 BORCS6Q96GS4 357 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 PAWRQ96IZ0 340 aaKnown RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 RNPC3Q96LT9 517 aaKnown RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 PDGFDQ9GZP0 370 aaPredicted RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 GJA3Q9Y6H8 435 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 RAD54L2Q9Y4B4 1467 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 TRIM6-TRIM34B2RNG4 842 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 FIBPO43427 364 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 TSPAN6O43657 245 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 DIAPH1O60610 1272 aaKnown RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 NR1I2O75469 434 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 FCHSD2O94868 740 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 GEMIN4P57678 1058 aaKnown RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 TOMM20Q15388 145 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 SLC4A8Q2Y0W8 1093 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 C16orf87Q6PH81 154 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 SMAP1Q8IYB5 467 aaPredicted RBP5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 TSPY26PQ9H489 355 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 LGR6Q9HBX8 967 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 CD248Q9HCU0 757 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 IP6K2Q9UHH9 426 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 CCDC61Q9Y6R9 512 aa5.42□□□□□ -1.54
SUPT20H-221ENST00000493537 VGLL3A8MV65 326 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 MPHOSPH10O00566 681 aaKnown RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 TRPC1P48995 793 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 NFE2Q16621 373 aaPredicted RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 DUSP27Q5VZP5 1158 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 ARMC3Q5W041 872 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 TTLL5Q6EMB2 1281 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 OTUD6AQ7L8S5 288 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 DZIP3Q86Y13 1208 aaKnown RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 REM2Q8IYK8 340 aaPredicted RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 NGEFQ8N5V2 710 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 ARL6IP6Q8N6S5 226 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 E2F7Q96AV8 911 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 MPP4Q96JB8 637 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 POLR3CQ9BUI4 534 aaPredicted RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 CCDC94Q9BW85 323 aaPredicted RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 CRISPLD2Q9H0B8 497 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 KMT5AQ9NQR1 393 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 NOVA2Q9UNW9 492 aaKnown RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 INPP5FQ9Y2H2 1132 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 IKBKGQ9Y6K9 419 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 ZCCHC6Q5VYS8 1495 aaKnown RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 PRRT4C9JH25 899 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 TCEA3O75764 348 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 RAPGEF3O95398 923 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 CCDC175P0C221 793 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 TSPAN7P41732 249 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 SEC13P55735 322 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 CBLBQ13191 982 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 TMED1Q13445 227 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 TRIM29Q14134 588 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 PDIA6Q15084 440 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 Q3C1V9 767 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 CCDC158Q5M9N0 1113 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 DNTTIP2Q5QJE6 756 aaKnown RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 ARHGEF25Q86VW2 580 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 STK11IPQ8N1F8 1099 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 DNAJC25Q9H1X3 360 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 DDX41Q9UJV9 622 aaKnown RBP5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 NDUFB9Q9Y6M9 179 aa5.41□□□□□ -1.54
SUPT20H-221ENST00000493537 ERICH4A6NGS2 130 aa5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 CHL1O00533 1208 aa5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 CCDC159P0C7I6 412 aa5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 U2AF1L5P0DN76 240 aaPredicted RBP5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 RPL17P18621 184 aaKnown RBP5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 PSMA3P25788 255 aa5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 U2AF1Q01081 240 aaKnown RBP eCLIP5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 VAC14Q08AM6 782 aa5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 UTP14CQ5TAP6 766 aaKnown RBP5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 VPS37DQ86XT2 251 aa5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 PPHLN1Q8NEY8 458 aaKnown RBP5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 RPGRQ92834 1020 aaKnown RBP5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 TRIM52Q96A61 297 aa5.4□□□□□ -1.54
SUPT20H-221ENST00000493537 SRGNP10124 158 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 ZNF76P36508 570 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 HYIQ5T013 277 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 KANK4Q5T7N3 995 aaPredicted RBP5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 NYAP1Q6ZVC0 841 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 MCF2L2Q86YR7 1114 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 BRSK2Q8IWQ3 736 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 ZNF496Q96IT1 587 aaPredicted RBP5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 L3MBTL3Q96JM7 780 aaPredicted RBP5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 MRS2Q9HD23 443 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 PTPRHQ9HD43 1115 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 SUN2Q9UH99 717 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 DCTN4Q9UJW0 460 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 GTF2A1LQ9UNN4 478 aa5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 FARP1Q9Y4F1 1045 aaPredicted RBP5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 GTPBP10A4D1E9 387 aaKnown RBP5.39□□□□□ -1.55
SUPT20H-221ENST00000493537 PRSS47A8MTI9 375 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms