RNA–Protein interactions for RNA: ENST00000493306.1

KLF4-204, Transcript of Kruppel like factor 4, humanhuman

TSL 1 (best)

Gene KLF4, Length 2,706 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-204ENST00000493306 NPM1P06748 294 aaKnown RBP eCLIP19.54■□□□□ 0.72
KLF4-204ENST00000493306 LIG1P18858 919 aa19.54■□□□□ 0.72
KLF4-204ENST00000493306 PLA2G4DQ86XP0 818 aa19.54■□□□□ 0.72
KLF4-204ENST00000493306 CKAP2LQ8IYA6 745 aa19.54■□□□□ 0.72
KLF4-204ENST00000493306 RUFY2Q8WXA3 655 aa19.54■□□□□ 0.72
KLF4-204ENST00000493306 NRBP1Q9UHY1 535 aa19.54■□□□□ 0.72
KLF4-204ENST00000493306 LARP1BQ659C4 914 aaKnown RBP19.54■□□□□ 0.72
KLF4-204ENST00000493306 RHPN1Q8TCX5 695 aa19.54■□□□□ 0.72
KLF4-204ENST00000493306 C3P01024 1663 aa19.54■□□□□ 0.72
KLF4-204ENST00000493306 DDX19AQ9NUU7 478 aaKnown RBP19.53■□□□□ 0.72
KLF4-204ENST00000493306 CCDC171Q6TFL3 1326 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 KIF18AQ8NI77 898 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 KIF1BPQ96EK5 621 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 XRN1Q8IZH2 1706 aaKnown RBP19.53■□□□□ 0.72
KLF4-204ENST00000493306 PDCP20941 246 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 CEP135Q66GS9 1140 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 KRT222Q8N1A0 295 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 TDRD7Q8NHU6 1098 aaKnown RBP19.53■□□□□ 0.72
KLF4-204ENST00000493306 TM6SF1Q9BZW5 370 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 CLIP2Q9UDT6 1046 aa19.53■□□□□ 0.72
KLF4-204ENST00000493306 ZNF592Q92610 1267 aa19.52■□□□□ 0.72
KLF4-204ENST00000493306 SCAND2PQ9GZW5 306 aaPredicted RBP19.52■□□□□ 0.72
KLF4-204ENST00000493306 USP44Q9H0E7 712 aa19.52■□□□□ 0.72
KLF4-204ENST00000493306 NCKAP5LQ9HCH0 1330 aa19.52■□□□□ 0.71
KLF4-204ENST00000493306 NAA30Q147X3 362 aaPredicted RBP19.52■□□□□ 0.71
KLF4-204ENST00000493306 ZSWIM6Q9HCJ5 1215 aa19.52■□□□□ 0.71
KLF4-204ENST00000493306 ITSN1Q15811 1721 aa19.52■□□□□ 0.71
KLF4-204ENST00000493306 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 CCDC66A2RUB6 948 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 FOXO3O43524 673 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 DTNBO60941 627 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 SLFN14P0C7P3 912 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 FERMT3Q86UX7 667 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 NPHP3Q7Z494 1330 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 HSP90AB2PQ58FF8 381 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 PRPF40BQ6NWY9 871 aaKnown RBP19.51■□□□□ 0.71
KLF4-204ENST00000493306 PPP1R42Q7Z4L9 355 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 ZNF397Q8NF99 534 aaPredicted RBP19.51■□□□□ 0.71
KLF4-204ENST00000493306 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
KLF4-204ENST00000493306 TTC21BQ7Z4L5 1316 aa19.5■□□□□ 0.71
KLF4-204ENST00000493306 ZNF165P49910 485 aa19.5■□□□□ 0.71
KLF4-204ENST00000493306 ME3Q16798 604 aa19.5■□□□□ 0.71
KLF4-204ENST00000493306 MTHFSDQ2M296 383 aaKnown RBP19.5■□□□□ 0.71
KLF4-204ENST00000493306 CACTINQ8WUQ7 758 aaKnown RBP19.5■□□□□ 0.71
KLF4-204ENST00000493306 NECTIN2Q92692 538 aa19.5■□□□□ 0.71
KLF4-204ENST00000493306 AKAP12Q02952 1782 aa19.5■□□□□ 0.71
KLF4-204ENST00000493306 PXDNLA1KZ92 1463 aa19.5■□□□□ 0.71
KLF4-204ENST00000493306 ZKSCAN1P17029 563 aaPredicted RBP19.5■□□□□ 0.71
KLF4-204ENST00000493306 ADCK5Q3MIX3 580 aa19.5■□□□□ 0.71
KLF4-204ENST00000493306 FBXO31Q5XUX0 539 aaPredicted RBP19.5■□□□□ 0.71
KLF4-204ENST00000493306 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
KLF4-204ENST00000493306 FAM208AQ9UK61 1670 aaKnown RBP19.49■□□□□ 0.71
KLF4-204ENST00000493306 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
KLF4-204ENST00000493306 NECAB1Q8N987 351 aa19.49■□□□□ 0.71
KLF4-204ENST00000493306 CLSTN2Q9H4D0 955 aa19.49■□□□□ 0.71
KLF4-204ENST00000493306 TTC21AQ8NDW8 1320 aa19.49■□□□□ 0.71
KLF4-204ENST00000493306 GLRX3O76003 335 aaKnown RBP19.48■□□□□ 0.71
KLF4-204ENST00000493306 CAVIN2O95810 425 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 CDC25BP30305 580 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 ST3GAL1Q11201 340 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 TERF2Q15554 542 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 RBM43Q6ZSC3 357 aaKnown RBP19.48■□□□□ 0.71
KLF4-204ENST00000493306 CACNA1FO60840 1977 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 NEMFO60524 1076 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 POLA2Q14181 598 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 RGPD1P0DJD0 1748 aa19.48■□□□□ 0.71
KLF4-204ENST00000493306 SRGAP3O43295 1099 aa19.47■□□□□ 0.71
KLF4-204ENST00000493306 FAM173BQ6P4H8 233 aa19.47■□□□□ 0.71
KLF4-204ENST00000493306 N4BP2Q86UW6 1770 aaPredicted RBP19.47■□□□□ 0.71
KLF4-204ENST00000493306 PTH1RQ03431 593 aa19.47■□□□□ 0.71
KLF4-204ENST00000493306 HSP90AB4PQ58FF6 505 aa19.47■□□□□ 0.71
KLF4-204ENST00000493306 DNAJC25Q9H1X3 360 aa19.47■□□□□ 0.71
KLF4-204ENST00000493306 MAP3K19Q56UN5 1328 aa19.47■□□□□ 0.71
KLF4-204ENST00000493306 TTC41PQ6P2S7 1318 aa19.47■□□□□ 0.71
KLF4-204ENST00000493306 GOLGA6L19H0YKK7 550 aa19.46■□□□□ 0.71
KLF4-204ENST00000493306 PTPN14Q15678 1187 aa19.46■□□□□ 0.71
KLF4-204ENST00000493306 BICD2Q8TD16 824 aa19.46■□□□□ 0.71
KLF4-204ENST00000493306 SPATA31D1Q6ZQQ2 1576 aa19.46■□□□□ 0.71
KLF4-204ENST00000493306 KCNJ4P48050 445 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 CCDC144BQ3MJ40 725 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 TPCN1Q9ULQ1 816 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 NEO1Q92859 1461 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 KMT5BQ4FZB7 885 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 LRRC8AQ8IWT6 810 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 KCNB2Q92953 911 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 ZNF215Q9UL58 517 aaPredicted RBP19.45■□□□□ 0.7
KLF4-204ENST00000493306 SETD1AO15047 1707 aaKnown RBP19.45■□□□□ 0.7
KLF4-204ENST00000493306 TXNDC2Q86VQ3 553 aa19.45■□□□□ 0.7
KLF4-204ENST00000493306 LEO1Q8WVC0 666 aaPredicted RBP19.45■□□□□ 0.7
KLF4-204ENST00000493306 TFIP11Q9UBB9 837 aaKnown RBP19.45■□□□□ 0.7
KLF4-204ENST00000493306 PSMA5P28066 241 aa19.44■□□□□ 0.7
KLF4-204ENST00000493306 ERO1AQ96HE7 468 aa19.44■□□□□ 0.7
KLF4-204ENST00000493306 USP42Q9H9J4 1324 aaKnown RBP19.44■□□□□ 0.7
KLF4-204ENST00000493306 OS9Q13438 667 aaPredicted RBP19.44■□□□□ 0.7
KLF4-204ENST00000493306 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms